Protein–RNA interactions for Protein: Q80WV7

Srrm3, Serine/arginine repetitive matrix protein 3, mousemouse

Predictions only

Length 648 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Srrm3Q80WV7 Npcd-201ENSMUST00000023060 1162 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
Srrm3Q80WV7 Lce1l-201ENSMUST00000054426 670 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Srrm3Q80WV7 Fmr1nb-201ENSMUST00000069731 799 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
Srrm3Q80WV7 Cdkn2d-201ENSMUST00000086374 1264 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Srrm3Q80WV7 Tstd3-201ENSMUST00000029915 1588 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Srrm3Q80WV7 Brpf1-210ENSMUST00000204626 4381 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
Srrm3Q80WV7 Pkn2-201ENSMUST00000043812 6207 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Srrm3Q80WV7 Abi3-201ENSMUST00000059026 4006 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Srrm3Q80WV7 Poli-202ENSMUST00000121674 2778 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Srrm3Q80WV7 Gm43056-201ENSMUST00000197865 2791 ntBASIC15.26■□□□□ 0.03
Srrm3Q80WV7 4632404H12Rik-201ENSMUST00000038450 2791 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Srrm3Q80WV7 Ccdc103-201ENSMUST00000021307 1841 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Srrm3Q80WV7 B130055M24Rik-201ENSMUST00000144796 1778 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Srrm3Q80WV7 Kctd14-201ENSMUST00000050732 2343 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
Srrm3Q80WV7 Hnrnpm-202ENSMUST00000114385 2550 ntTSL 2 BASIC15.26■□□□□ 0.03
Srrm3Q80WV7 Rrp1-201ENSMUST00000062678 1984 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Srrm3Q80WV7 Gm13127-201ENSMUST00000118978 1389 ntBASIC15.25■□□□□ 0.03
Srrm3Q80WV7 Ctnnd2-203ENSMUST00000226119 4111 ntAPPRIS ALT2 BASIC15.25■□□□□ 0.03
Srrm3Q80WV7 Pofut1-203ENSMUST00000099192 1385 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Srrm3Q80WV7 Lman2-201ENSMUST00000021940 4315 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Srrm3Q80WV7 Commd7-201ENSMUST00000071852 3210 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Srrm3Q80WV7 Sigirr-206ENSMUST00000210167 1897 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
Srrm3Q80WV7 A530083I20Rik-203ENSMUST00000214426 1855 ntTSL 5 BASIC15.25■□□□□ 0.03
Srrm3Q80WV7 B4galnt1-201ENSMUST00000006914 2395 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Srrm3Q80WV7 Psap-202ENSMUST00000105465 2646 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
Srrm3Q80WV7 Dsn1-201ENSMUST00000103129 2080 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Srrm3Q80WV7 Prickle3-201ENSMUST00000033485 2301 ntAPPRIS P2 TSL 1 (best) BASIC15.25■□□□□ 0.03
Srrm3Q80WV7 Slc25a32-201ENSMUST00000022908 5905 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Srrm3Q80WV7 Nt5c-202ENSMUST00000106530 836 ntTSL 3 BASIC15.25■□□□□ 0.03
Srrm3Q80WV7 2200002J24Rik-201ENSMUST00000013227 333 ntAPPRIS P1 TSL 3 BASIC15.25■□□□□ 0.03
Srrm3Q80WV7 AC153794.1-201ENSMUST00000169148 126 ntBASIC15.25■□□□□ 0.03
Srrm3Q80WV7 Hsd3b2-203ENSMUST00000177651 1122 ntAPPRIS P1 TSL 5 BASIC15.25■□□□□ 0.03
Srrm3Q80WV7 Gm19710-202ENSMUST00000200320 493 ntTSL 3 BASIC15.25■□□□□ 0.03
Srrm3Q80WV7 Elof1-203ENSMUST00000213233 810 ntAPPRIS P1 TSL 3 BASIC15.25■□□□□ 0.03
Srrm3Q80WV7 Sfxn5-202ENSMUST00000059034 1081 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
Srrm3Q80WV7 Hist1h2ak-201ENSMUST00000074752 393 ntAPPRIS P1 BASIC15.25■□□□□ 0.03
Srrm3Q80WV7 Gm14451-201ENSMUST00000121581 1542 ntBASIC15.25■□□□□ 0.03
Srrm3Q80WV7 Alx1-205ENSMUST00000218282 2012 ntAPPRIS P1 TSL 5 BASIC15.25■□□□□ 0.03
Srrm3Q80WV7 Cdk8-205ENSMUST00000161181 2467 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Srrm3Q80WV7 Scamp3-203ENSMUST00000120697 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
Srrm3Q80WV7 Slc39a11-202ENSMUST00000071539 2664 ntAPPRIS P3 TSL 1 (best) BASIC15.25■□□□□ 0.03
Srrm3Q80WV7 Slc35c2-203ENSMUST00000109299 1926 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Srrm3Q80WV7 Necap2-201ENSMUST00000030760 1906 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Srrm3Q80WV7 1110008P14Rik-202ENSMUST00000146423 2618 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Srrm3Q80WV7 Dnm1l-201ENSMUST00000023477 4017 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Srrm3Q80WV7 Fgfr3-201ENSMUST00000067150 4218 ntAPPRIS P4 TSL 1 (best) BASIC15.25■□□□□ 0.03
Srrm3Q80WV7 Hes2-201ENSMUST00000030782 2521 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Srrm3Q80WV7 Adam23-201ENSMUST00000087374 6426 ntAPPRIS P2 TSL 1 (best) BASIC15.24■□□□□ 0.03
Srrm3Q80WV7 Adam15-201ENSMUST00000029676 2975 ntAPPRIS P4 TSL 1 (best) BASIC15.24■□□□□ 0.03
Srrm3Q80WV7 Gm4081-201ENSMUST00000195287 1838 ntBASIC15.24■□□□□ 0.03
Srrm3Q80WV7 Acat2-201ENSMUST00000007005 2250 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Srrm3Q80WV7 Osm-201ENSMUST00000075221 2272 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Srrm3Q80WV7 Clcnkb-202ENSMUST00000105788 2490 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Srrm3Q80WV7 Gjb1-203ENSMUST00000119190 1585 ntAPPRIS P1 TSL 2 BASIC15.24■□□□□ 0.03
Srrm3Q80WV7 Nat8f6-202ENSMUST00000174143 1571 ntAPPRIS P1 TSL 3 BASIC15.24■□□□□ 0.03
Srrm3Q80WV7 Fnip2-201ENSMUST00000076136 3775 ntAPPRIS P2 TSL 5 BASIC15.24■□□□□ 0.03
Srrm3Q80WV7 4930528D03Rik-201ENSMUST00000181528 1339 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Srrm3Q80WV7 Ftsj1-202ENSMUST00000115594 1529 ntTSL 5 BASIC15.24■□□□□ 0.03
Srrm3Q80WV7 Irgc1-201ENSMUST00000080594 1737 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Srrm3Q80WV7 Slc12a5-201ENSMUST00000099092 6028 ntAPPRIS P2 TSL 1 (best) BASIC15.24■□□□□ 0.03
Srrm3Q80WV7 Tmem241-202ENSMUST00000055447 2597 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
Srrm3Q80WV7 Ociad2-201ENSMUST00000087195 2554 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Srrm3Q80WV7 Ftcd-201ENSMUST00000001183 1933 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Srrm3Q80WV7 Mymx-202ENSMUST00000169137 616 ntAPPRIS P4 TSL 2 BASIC15.24■□□□□ 0.03
Srrm3Q80WV7 Gm43767-201ENSMUST00000198933 381 ntBASIC15.24■□□□□ 0.03
Srrm3Q80WV7 Snrpf-201ENSMUST00000020203 861 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Srrm3Q80WV7 Gm45231-201ENSMUST00000208629 1064 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Srrm3Q80WV7 Gm9172-201ENSMUST00000212092 954 ntBASIC15.24■□□□□ 0.03
Srrm3Q80WV7 Icam4-202ENSMUST00000215077 1028 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
Srrm3Q80WV7 Lin37-201ENSMUST00000043975 998 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Srrm3Q80WV7 A330070K13Rik-201ENSMUST00000063656 633 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Srrm3Q80WV7 Mdk-202ENSMUST00000069423 773 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Srrm3Q80WV7 Ash2l-204ENSMUST00000110610 2337 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
Srrm3Q80WV7 Npcd-202ENSMUST00000089299 1453 ntAPPRIS P4 TSL 1 (best) BASIC15.24■□□□□ 0.03
Srrm3Q80WV7 Siglecf-201ENSMUST00000012798 2510 ntAPPRIS P3 TSL 1 (best) BASIC15.24■□□□□ 0.03
Srrm3Q80WV7 Gbe1-207ENSMUST00000171132 3303 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Srrm3Q80WV7 Arid3a-203ENSMUST00000105377 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
Srrm3Q80WV7 Cct6a-202ENSMUST00000201414 2454 ntTSL 5 BASIC15.24■□□□□ 0.03
Srrm3Q80WV7 Syt1-201ENSMUST00000064054 4745 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Srrm3Q80WV7 Smpd4-221ENSMUST00000170996 1619 ntTSL 5 BASIC15.24■□□□□ 0.03
Srrm3Q80WV7 Prss23-201ENSMUST00000041761 3228 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Srrm3Q80WV7 Cobl-208ENSMUST00000172919 2566 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Srrm3Q80WV7 Lrrc7-204ENSMUST00000199890 6326 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Srrm3Q80WV7 Ap1s1-201ENSMUST00000111080 1353 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Srrm3Q80WV7 Myo15b-202ENSMUST00000093911 9340 ntAPPRIS P1 TSL 5 BASIC15.23■□□□□ 0.03
Srrm3Q80WV7 Tmem94-201ENSMUST00000093912 5329 ntAPPRIS P2 TSL 1 (best) BASIC15.23■□□□□ 0.03
Srrm3Q80WV7 Kcnj9-202ENSMUST00000194204 2265 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Srrm3Q80WV7 Taok2-201ENSMUST00000071268 4720 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
Srrm3Q80WV7 Syt12-201ENSMUST00000059295 3581 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Srrm3Q80WV7 Dbndd1-201ENSMUST00000176155 1677 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Srrm3Q80WV7 Lamc1-201ENSMUST00000027752 7622 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Srrm3Q80WV7 Itfg1-201ENSMUST00000034140 3306 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Srrm3Q80WV7 Evx1os-201ENSMUST00000125305 2916 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Srrm3Q80WV7 Gm12216-201ENSMUST00000117316 1152 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
Srrm3Q80WV7 Gm11615-201ENSMUST00000156205 818 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Srrm3Q80WV7 Gm20478-201ENSMUST00000173648 1031 ntTSL 3 BASIC15.23■□□□□ 0.03
Srrm3Q80WV7 Gm8318-201ENSMUST00000182954 872 ntBASIC15.23■□□□□ 0.03
Srrm3Q80WV7 Gm27321-201ENSMUST00000185021 205 ntBASIC15.23■□□□□ 0.03
Srrm3Q80WV7 Gm30191-201ENSMUST00000205501 647 ntAPPRIS P1 TSL 5 BASIC15.23■□□□□ 0.03
Srrm3Q80WV7 Gm45683-201ENSMUST00000210825 1247 ntBASIC15.23■□□□□ 0.03
Retrieved 100 of 76,532 protein–RNA pairs in 30.5 ms