Protein–RNA interactions for Protein: Q80TE0

Rpap1, RNA polymerase II-associated protein 1, mousemouse

Predictions only

Length 1,409 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rpap1Q80TE0 Aurkaip1-202ENSMUST00000105591 773 ntAPPRIS P1 TSL 3 BASIC22.42■■□□□ 1.18
Rpap1Q80TE0 Nudt1-203ENSMUST00000110825 599 ntTSL 2 BASIC22.42■■□□□ 1.18
Rpap1Q80TE0 Gm13112-201ENSMUST00000138795 1258 ntTSL 1 (best) BASIC22.42■■□□□ 1.18
Rpap1Q80TE0 Snora78-201ENSMUST00000158630 128 ntBASIC22.42■■□□□ 1.18
Rpap1Q80TE0 Prss55-203ENSMUST00000171503 1074 ntTSL 1 (best) BASIC22.42■■□□□ 1.18
Rpap1Q80TE0 4933434E20Rik-202ENSMUST00000029552 1080 ntTSL 1 (best) BASIC22.42■■□□□ 1.18
Rpap1Q80TE0 Prss44-201ENSMUST00000098345 1838 ntAPPRIS P1 TSL 1 (best) BASIC22.42■■□□□ 1.18
Rpap1Q80TE0 Pdia4-201ENSMUST00000077290 2399 ntAPPRIS P1 TSL 1 (best) BASIC22.42■■□□□ 1.18
Rpap1Q80TE0 Chit1-201ENSMUST00000086475 1688 ntAPPRIS P1 TSL 1 (best) BASIC22.42■■□□□ 1.18
Rpap1Q80TE0 Lgr6-202ENSMUST00000137968 2820 ntTSL 1 (best) BASIC22.42■■□□□ 1.18
Rpap1Q80TE0 Eif2a-201ENSMUST00000029387 2299 ntAPPRIS P1 TSL 1 (best) BASIC22.42■■□□□ 1.18
Rpap1Q80TE0 Pom121l2-202ENSMUST00000117882 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC22.42■■□□□ 1.18
Rpap1Q80TE0 Nkpd1-202ENSMUST00000207576 2916 ntAPPRIS P2 TSL 5 BASIC22.42■■□□□ 1.18
Rpap1Q80TE0 Mier2-201ENSMUST00000062855 2562 ntAPPRIS P3 TSL 1 (best) BASIC22.42■■□□□ 1.18
Rpap1Q80TE0 Snx14-206ENSMUST00000173039 2970 ntTSL 5 BASIC22.42■■□□□ 1.18
Rpap1Q80TE0 Jph4-202ENSMUST00000124493 3200 ntAPPRIS P1 TSL 1 (best) BASIC22.42■■□□□ 1.18
Rpap1Q80TE0 B3gnt5-202ENSMUST00000119468 2229 ntAPPRIS P1 TSL 1 (best) BASIC22.42■■□□□ 1.18
Rpap1Q80TE0 Gm9816-201ENSMUST00000122292 1414 ntBASIC22.42■■□□□ 1.18
Rpap1Q80TE0 Chd5-205ENSMUST00000164662 9375 ntAPPRIS ALT2 TSL 1 (best) BASIC22.42■■□□□ 1.18
Rpap1Q80TE0 Npffr1-201ENSMUST00000020287 3479 ntAPPRIS P1 TSL 5 BASIC22.42■■□□□ 1.18
Rpap1Q80TE0 Kcnj6-202ENSMUST00000099508 3086 ntAPPRIS P1 TSL 1 (best) BASIC22.42■■□□□ 1.18
Rpap1Q80TE0 Trem1-202ENSMUST00000113251 2077 ntTSL 1 (best) BASIC22.41■■□□□ 1.18
Rpap1Q80TE0 Synrg-201ENSMUST00000049714 3995 ntAPPRIS ALT2 TSL 5 BASIC22.41■■□□□ 1.18
Rpap1Q80TE0 Dusp8-201ENSMUST00000039926 4804 ntAPPRIS P1 TSL 1 (best) BASIC22.41■■□□□ 1.18
Rpap1Q80TE0 Gm5678-201ENSMUST00000120115 939 ntAPPRIS P1 TSL 5 BASIC22.41■■□□□ 1.18
Rpap1Q80TE0 Tbx3os1-203ENSMUST00000140101 490 ntTSL 3 BASIC22.41■■□□□ 1.18
Rpap1Q80TE0 1700030C10Rik-202ENSMUST00000186243 126 ntBASIC22.41■■□□□ 1.18
Rpap1Q80TE0 Trib2-204ENSMUST00000221518 1192 ntTSL 5 BASIC22.41■■□□□ 1.18
Rpap1Q80TE0 Gk5-201ENSMUST00000085217 2815 ntAPPRIS ALT2 TSL 1 (best) BASIC22.41■■□□□ 1.18
Rpap1Q80TE0 Pnck-201ENSMUST00000002087 1536 ntAPPRIS P1 TSL 1 (best) BASIC22.41■■□□□ 1.18
Rpap1Q80TE0 Itm2b-201ENSMUST00000022704 1796 ntAPPRIS P1 TSL 1 (best) BASIC22.41■■□□□ 1.18
Rpap1Q80TE0 Gm14780-201ENSMUST00000118387 2737 ntBASIC22.41■■□□□ 1.18
Rpap1Q80TE0 Nfe2-205ENSMUST00000133600 1605 ntTSL 5 BASIC22.41■■□□□ 1.18
Rpap1Q80TE0 Rmi2-201ENSMUST00000037913 3742 ntAPPRIS P1 TSL 1 (best) BASIC22.41■■□□□ 1.18
Rpap1Q80TE0 Ano8-204ENSMUST00000213382 3785 ntAPPRIS ALT2 TSL 5 BASIC22.41■■□□□ 1.18
Rpap1Q80TE0 Tarbp1-201ENSMUST00000170518 6383 ntAPPRIS P1 TSL 5 BASIC22.41■■□□□ 1.18
Rpap1Q80TE0 Snx8-201ENSMUST00000031539 2627 ntAPPRIS P2 TSL 1 (best) BASIC22.41■■□□□ 1.18
Rpap1Q80TE0 Ptpa-203ENSMUST00000113603 2169 ntTSL 5 BASIC22.41■■□□□ 1.18
Rpap1Q80TE0 Itgb4-210ENSMUST00000169928 6160 ntAPPRIS P2 TSL 5 BASIC22.41■■□□□ 1.18
Rpap1Q80TE0 Rbm22-201ENSMUST00000025506 2210 ntAPPRIS P1 TSL 1 (best) BASIC22.41■■□□□ 1.18
Rpap1Q80TE0 Med15-202ENSMUST00000080936 3263 ntAPPRIS ALT2 TSL 1 (best) BASIC22.4■■□□□ 1.18
Rpap1Q80TE0 Sgce-207ENSMUST00000126151 1522 ntTSL 5 BASIC22.4■■□□□ 1.18
Rpap1Q80TE0 Gm14660-201ENSMUST00000119809 575 ntBASIC22.4■■□□□ 1.18
Rpap1Q80TE0 C430014B12Rik-201ENSMUST00000181720 1001 ntTSL 1 (best) BASIC22.4■■□□□ 1.18
Rpap1Q80TE0 Gm42693-201ENSMUST00000196779 631 ntBASIC22.4■■□□□ 1.18
Rpap1Q80TE0 Gm17794-201ENSMUST00000220252 955 ntBASIC22.4■■□□□ 1.18
Rpap1Q80TE0 Ube2j2-201ENSMUST00000024056 3483 ntTSL 1 (best) BASIC22.4■■□□□ 1.18
Rpap1Q80TE0 Aire-216ENSMUST00000156417 1627 ntTSL 1 (best) BASIC22.4■■□□□ 1.18
Rpap1Q80TE0 Ube2r2-201ENSMUST00000040008 3600 ntAPPRIS P1 TSL 1 (best) BASIC22.4■■□□□ 1.18
Rpap1Q80TE0 Prrt2-201ENSMUST00000159916 2501 ntAPPRIS P1 TSL 5 BASIC22.4■■□□□ 1.18
Rpap1Q80TE0 Ccnc-203ENSMUST00000108240 1406 ntTSL 1 (best) BASIC22.4■■□□□ 1.18
Rpap1Q80TE0 Gm11732-201ENSMUST00000151381 1742 ntTSL 1 (best) BASIC22.4■■□□□ 1.18
Rpap1Q80TE0 Zfp644-204ENSMUST00000112696 5785 ntAPPRIS ALT2 TSL 5 BASIC22.4■■□□□ 1.18
Rpap1Q80TE0 Arsi-201ENSMUST00000040359 2975 ntAPPRIS P1 TSL 1 (best) BASIC22.4■■□□□ 1.18
Rpap1Q80TE0 St3gal3-202ENSMUST00000097912 2143 ntTSL 1 (best) BASIC22.4■■□□□ 1.18
Rpap1Q80TE0 Arfgap2-202ENSMUST00000080008 3068 ntAPPRIS P1 TSL 1 (best) BASIC22.4■■□□□ 1.18
Rpap1Q80TE0 Gm13185-201ENSMUST00000131044 944 ntTSL 3 BASIC22.4■■□□□ 1.18
Rpap1Q80TE0 AC155258.1-201ENSMUST00000219303 253 ntBASIC22.4■■□□□ 1.18
Rpap1Q80TE0 Atp6v0c-201ENSMUST00000024932 1183 ntAPPRIS P1 TSL 1 (best) BASIC22.4■■□□□ 1.18
Rpap1Q80TE0 Olfr463-201ENSMUST00000081417 936 ntAPPRIS P1 BASIC22.4■■□□□ 1.18
Rpap1Q80TE0 Ptprn-201ENSMUST00000027404 3554 ntAPPRIS P1 TSL 1 (best) BASIC22.39■■□□□ 1.18
Rpap1Q80TE0 Zfp57-202ENSMUST00000089968 1991 ntAPPRIS ALT2 TSL 1 (best) BASIC22.39■■□□□ 1.18
Rpap1Q80TE0 Whrn-201ENSMUST00000063650 4016 ntAPPRIS ALT2 TSL 1 (best) BASIC22.39■■□□□ 1.18
Rpap1Q80TE0 Slc22a7-201ENSMUST00000087012 2007 ntAPPRIS P1 TSL 1 (best) BASIC22.39■■□□□ 1.18
Rpap1Q80TE0 Dennd6a-201ENSMUST00000037585 6638 ntAPPRIS P1 TSL 1 (best) BASIC22.39■■□□□ 1.18
Rpap1Q80TE0 Nova2-202ENSMUST00000220302 8372 ntAPPRIS P1 TSL 5 BASIC22.39■■□□□ 1.18
Rpap1Q80TE0 Nova2-201ENSMUST00000032571 8372 ntTSL 5 BASIC22.39■■□□□ 1.18
Rpap1Q80TE0 Slc43a3-201ENSMUST00000090726 2583 ntAPPRIS P1 TSL 1 (best) BASIC22.39■■□□□ 1.17
Rpap1Q80TE0 Gm26882-201ENSMUST00000181611 1537 ntTSL 5 BASIC22.39■■□□□ 1.17
Rpap1Q80TE0 Fgf13-201ENSMUST00000033473 2499 ntAPPRIS P1 TSL 1 (best) BASIC22.39■■□□□ 1.17
Rpap1Q80TE0 H60b-202ENSMUST00000131558 1080 ntAPPRIS P1 TSL 5 BASIC22.39■■□□□ 1.17
Rpap1Q80TE0 Gm45784-201ENSMUST00000188360 142 ntBASIC22.39■■□□□ 1.17
Rpap1Q80TE0 Gm37424-201ENSMUST00000191727 561 ntBASIC22.39■■□□□ 1.17
Rpap1Q80TE0 AC140451.2-201ENSMUST00000228030 664 ntBASIC22.39■■□□□ 1.17
Rpap1Q80TE0 Cfc1-201ENSMUST00000027298 1040 ntAPPRIS P1 TSL 1 (best) BASIC22.39■■□□□ 1.17
Rpap1Q80TE0 Duoxa1-201ENSMUST00000028653 1026 ntAPPRIS P1 TSL 3 BASIC22.39■■□□□ 1.17
Rpap1Q80TE0 Chmp1a-201ENSMUST00000000759 2140 ntAPPRIS P1 TSL 1 (best) BASIC22.39■■□□□ 1.17
Rpap1Q80TE0 Fars2-202ENSMUST00000099582 962 ntTSL 1 (best) BASIC22.39■■□□□ 1.17
Rpap1Q80TE0 As3mt-201ENSMUST00000003655 1751 ntAPPRIS P1 TSL 1 (best) BASIC22.39■■□□□ 1.17
Rpap1Q80TE0 BC037039-201ENSMUST00000192003 2205 ntBASIC22.39■■□□□ 1.17
Rpap1Q80TE0 Clvs2-201ENSMUST00000019920 2717 ntAPPRIS P1 TSL 1 (best) BASIC22.38■■□□□ 1.17
Rpap1Q80TE0 Zfp707-201ENSMUST00000109966 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC22.38■■□□□ 1.17
Rpap1Q80TE0 Fam219a-201ENSMUST00000108049 3296 ntTSL 1 (best) BASIC22.38■■□□□ 1.17
Rpap1Q80TE0 Fhl2-202ENSMUST00000185893 1421 ntAPPRIS P1 TSL 1 (best) BASIC22.38■■□□□ 1.17
Rpap1Q80TE0 Vps37c-201ENSMUST00000087951 2415 ntAPPRIS P1 TSL 1 (best) BASIC22.38■■□□□ 1.17
Rpap1Q80TE0 Cyp2ab1-205ENSMUST00000182741 1497 ntAPPRIS P1 TSL 5 BASIC22.38■■□□□ 1.17
Rpap1Q80TE0 Gm26840-201ENSMUST00000180784 2980 ntTSL 1 (best) BASIC22.38■■□□□ 1.17
Rpap1Q80TE0 Adck5-214ENSMUST00000162503 2040 ntAPPRIS P1 TSL 5 BASIC22.38■■□□□ 1.17
Rpap1Q80TE0 Anks6-201ENSMUST00000084616 3552 ntAPPRIS P1 TSL 5 BASIC22.38■■□□□ 1.17
Rpap1Q80TE0 Pid1-204ENSMUST00000176559 1564 ntTSL 2 BASIC22.38■■□□□ 1.17
Rpap1Q80TE0 Nhs-201ENSMUST00000081569 4881 ntAPPRIS P3 TSL 1 (best) BASIC22.38■■□□□ 1.17
Rpap1Q80TE0 Hs3st5-203ENSMUST00000168572 2715 ntAPPRIS P1 TSL 1 (best) BASIC22.38■■□□□ 1.17
Rpap1Q80TE0 Cyp20a1-201ENSMUST00000060608 2223 ntAPPRIS P1 TSL 1 (best) BASIC22.38■■□□□ 1.17
Rpap1Q80TE0 Apoa4-201ENSMUST00000034585 1815 ntAPPRIS P1 TSL 1 (best) BASIC22.38■■□□□ 1.17
Rpap1Q80TE0 Ifnar2-203ENSMUST00000117836 1099 ntAPPRIS ALT2 TSL 1 (best) BASIC22.38■■□□□ 1.17
Rpap1Q80TE0 Gm27206-201ENSMUST00000154038 979 ntTSL 5 BASIC22.38■■□□□ 1.17
Rpap1Q80TE0 AC102291.3-201ENSMUST00000226566 405 ntBASIC22.38■■□□□ 1.17
Rpap1Q80TE0 Ttr-201ENSMUST00000075312 1219 ntAPPRIS P1 TSL 1 (best) BASIC22.38■■□□□ 1.17
Rpap1Q80TE0 Gm10478-201ENSMUST00000084451 396 ntBASIC22.38■■□□□ 1.17
Rpap1Q80TE0 Tmem256-201ENSMUST00000094065 492 ntAPPRIS P1 TSL 1 (best) BASIC22.38■■□□□ 1.17
Retrieved 100 of 76,532 protein–RNA pairs in 32.4 ms