Protein–RNA interactions for Protein: Q80SY5

Prpf38b, Pre-mRNA-splicing factor 38B, mousemouse

Known RBP Predictions only

Length 542 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prpf38bQ80SY5 Gm3365-201ENSMUST00000216296 1480 ntBASIC15.33■□□□□ 0.05
Prpf38bQ80SY5 Kdr-201ENSMUST00000113516 5924 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
Prpf38bQ80SY5 Cdk2-201ENSMUST00000026415 2240 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
Prpf38bQ80SY5 Nkain2-203ENSMUST00000191234 3760 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
Prpf38bQ80SY5 Zfp423-202ENSMUST00000109655 4907 ntAPPRIS P2 TSL 1 (best) BASIC15.33■□□□□ 0.05
Prpf38bQ80SY5 Tmc8-203ENSMUST00000117781 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.05
Prpf38bQ80SY5 Tyro3-201ENSMUST00000028763 3989 ntAPPRIS P3 TSL 1 (best) BASIC15.33■□□□□ 0.04
Prpf38bQ80SY5 Mdfic-203ENSMUST00000125326 3635 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
Prpf38bQ80SY5 Smpd4-221ENSMUST00000170996 1619 ntTSL 5 BASIC15.33■□□□□ 0.04
Prpf38bQ80SY5 Kif26a-201ENSMUST00000128402 6918 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Prpf38bQ80SY5 Jakmip1-202ENSMUST00000121010 2496 ntTSL 5 BASIC15.33■□□□□ 0.04
Prpf38bQ80SY5 Bend4-201ENSMUST00000169190 7935 ntAPPRIS P1 TSL 5 BASIC15.33■□□□□ 0.04
Prpf38bQ80SY5 Mbd3-202ENSMUST00000105347 914 ntTSL 2 BASIC15.33■□□□□ 0.04
Prpf38bQ80SY5 Tex22-202ENSMUST00000109729 735 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Prpf38bQ80SY5 Gm16215-201ENSMUST00000161990 637 ntBASIC15.33■□□□□ 0.04
Prpf38bQ80SY5 Gm44855-201ENSMUST00000205725 362 ntBASIC15.33■□□□□ 0.04
Prpf38bQ80SY5 Epo-201ENSMUST00000031723 715 ntAPPRIS P3 TSL 1 (best) BASIC15.33■□□□□ 0.04
Prpf38bQ80SY5 Arsi-201ENSMUST00000040359 2975 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Prpf38bQ80SY5 Gm5771-201ENSMUST00000049079 798 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Prpf38bQ80SY5 Men1-201ENSMUST00000056391 2975 ntAPPRIS P2 TSL 1 (best) BASIC15.33■□□□□ 0.04
Prpf38bQ80SY5 Phgr1-201ENSMUST00000061360 538 ntAPPRIS ALT2 TSL 5 BASIC15.33■□□□□ 0.04
Prpf38bQ80SY5 Atad3aos-201ENSMUST00000067628 971 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
Prpf38bQ80SY5 Ptprs-211ENSMUST00000223859 5588 ntBASIC15.33■□□□□ 0.04
Prpf38bQ80SY5 Slc12a5-201ENSMUST00000099092 6028 ntAPPRIS P2 TSL 1 (best) BASIC15.33■□□□□ 0.04
Prpf38bQ80SY5 AC131104.1-201ENSMUST00000222118 1739 ntTSL 5 BASIC15.33■□□□□ 0.04
Prpf38bQ80SY5 Cdhr5-202ENSMUST00000167263 2628 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.04
Prpf38bQ80SY5 Asf1b-201ENSMUST00000005607 1788 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Prpf38bQ80SY5 Disc1-207ENSMUST00000121953 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.04
Prpf38bQ80SY5 Pam-210ENSMUST00000161567 3630 ntAPPRIS ALT2 TSL 5 BASIC15.33■□□□□ 0.04
Prpf38bQ80SY5 Prr23a3-201ENSMUST00000167951 1817 ntAPPRIS P1 BASIC15.33■□□□□ 0.04
Prpf38bQ80SY5 Gm26826-201ENSMUST00000181317 1395 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
Prpf38bQ80SY5 Rspry1-207ENSMUST00000212729 2800 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
Prpf38bQ80SY5 Fxyd3-205ENSMUST00000167369 2894 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Prpf38bQ80SY5 Traf5-201ENSMUST00000085573 1964 ntAPPRIS P1 TSL 5 BASIC15.33■□□□□ 0.04
Prpf38bQ80SY5 Smyd5-201ENSMUST00000045693 2486 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Prpf38bQ80SY5 Siglecf-201ENSMUST00000012798 2510 ntAPPRIS P3 TSL 1 (best) BASIC15.33■□□□□ 0.04
Prpf38bQ80SY5 Pdlim1-201ENSMUST00000068439 2571 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Prpf38bQ80SY5 E430018J23Rik-201ENSMUST00000074249 2063 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Prpf38bQ80SY5 Mrps35-201ENSMUST00000036111 4162 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Prpf38bQ80SY5 Commd10-201ENSMUST00000049388 1561 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Prpf38bQ80SY5 Gm4219-201ENSMUST00000168140 2143 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Prpf38bQ80SY5 Spag16-201ENSMUST00000065425 2126 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Prpf38bQ80SY5 Galnt13-203ENSMUST00000112635 7531 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Prpf38bQ80SY5 Cacnb1-201ENSMUST00000017552 3396 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Prpf38bQ80SY5 Islr2-205ENSMUST00000170421 4071 ntAPPRIS P3 TSL 3 BASIC15.32■□□□□ 0.04
Prpf38bQ80SY5 CT025610.1-201ENSMUST00000224552 1786 ntBASIC15.32■□□□□ 0.04
Prpf38bQ80SY5 Tle1-202ENSMUST00000072695 3644 ntAPPRIS P2 TSL 1 (best) BASIC15.32■□□□□ 0.04
Prpf38bQ80SY5 Bnipl-202ENSMUST00000107195 1810 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Prpf38bQ80SY5 Gm12008-201ENSMUST00000117791 755 ntBASIC15.32■□□□□ 0.04
Prpf38bQ80SY5 Gm833-201ENSMUST00000143133 884 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Prpf38bQ80SY5 1700047K16Rik-201ENSMUST00000145068 886 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Prpf38bQ80SY5 Gm2272-201ENSMUST00000194903 582 ntBASIC15.32■□□□□ 0.04
Prpf38bQ80SY5 AC132863.2-201ENSMUST00000226643 799 ntBASIC15.32■□□□□ 0.04
Prpf38bQ80SY5 Prg3-201ENSMUST00000028466 949 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Prpf38bQ80SY5 2210406O10Rik-201ENSMUST00000044964 937 ntTSL 5 BASIC15.32■□□□□ 0.04
Prpf38bQ80SY5 Rpsa-ps10-201ENSMUST00000057740 885 ntBASIC15.32■□□□□ 0.04
Prpf38bQ80SY5 Pard6a-202ENSMUST00000098444 1273 ntTSL 2 BASIC15.32■□□□□ 0.04
Prpf38bQ80SY5 1600020E01Rik-207ENSMUST00000204738 1997 ntTSL 5 BASIC15.32■□□□□ 0.04
Prpf38bQ80SY5 Tex13a-201ENSMUST00000096314 1317 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Prpf38bQ80SY5 Tc2n-203ENSMUST00000160830 2005 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Prpf38bQ80SY5 Il11ra1-201ENSMUST00000098132 2009 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Prpf38bQ80SY5 Fam83g-202ENSMUST00000093019 4778 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Prpf38bQ80SY5 Psmd8-202ENSMUST00000182328 1391 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
Prpf38bQ80SY5 Slc6a11-201ENSMUST00000032451 4132 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Prpf38bQ80SY5 Tmem161a-214ENSMUST00000182980 2080 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Prpf38bQ80SY5 Papd7-204ENSMUST00000223344 2118 ntAPPRIS P2 TSL 3 BASIC15.32■□□□□ 0.04
Prpf38bQ80SY5 Miga1-202ENSMUST00000073089 4965 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Prpf38bQ80SY5 Stra8-203ENSMUST00000114999 1455 ntAPPRIS P2 TSL 1 (best) BASIC15.32■□□□□ 0.04
Prpf38bQ80SY5 Cyb561a3-201ENSMUST00000168445 1474 ntAPPRIS P1 TSL 5 BASIC15.32■□□□□ 0.04
Prpf38bQ80SY5 Cog8-202ENSMUST00000095517 4476 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Prpf38bQ80SY5 Psmd14-201ENSMUST00000028278 1541 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Prpf38bQ80SY5 Prr15-201ENSMUST00000059138 1511 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Prpf38bQ80SY5 Fen1-204ENSMUST00000156291 2373 ntAPPRIS P1 TSL 2 BASIC15.32■□□□□ 0.04
Prpf38bQ80SY5 Nop53-201ENSMUST00000044158 3176 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Prpf38bQ80SY5 Srpx-201ENSMUST00000044789 2477 ntAPPRIS P2 TSL 1 (best) BASIC15.32■□□□□ 0.04
Prpf38bQ80SY5 Pald1-201ENSMUST00000020289 4282 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Prpf38bQ80SY5 Rab23-201ENSMUST00000088287 4322 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Prpf38bQ80SY5 Tbl1x-201ENSMUST00000088217 5234 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Prpf38bQ80SY5 Scyl1-201ENSMUST00000025890 2637 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Prpf38bQ80SY5 Map2k7-202ENSMUST00000062686 3525 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Prpf38bQ80SY5 G630022F23Rik-201ENSMUST00000202923 3627 ntBASIC15.31■□□□□ 0.04
Prpf38bQ80SY5 Tpcn1-201ENSMUST00000046426 4712 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Prpf38bQ80SY5 Snn-201ENSMUST00000089011 2902 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Prpf38bQ80SY5 Nkx6-1-201ENSMUST00000044125 3138 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Prpf38bQ80SY5 Srrm1-208ENSMUST00000136342 3152 ntAPPRIS P3 TSL 5 BASIC15.31■□□□□ 0.04
Prpf38bQ80SY5 Dsg2-201ENSMUST00000059787 5766 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Prpf38bQ80SY5 Glg1-204ENSMUST00000169020 7021 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Prpf38bQ80SY5 Crybb3-205ENSMUST00000120506 804 ntAPPRIS P1 TSL 3 BASIC15.31■□□□□ 0.04
Prpf38bQ80SY5 Gm15222-201ENSMUST00000127359 344 ntTSL 3 BASIC15.31■□□□□ 0.04
Prpf38bQ80SY5 Commd6-203ENSMUST00000168587 519 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Prpf38bQ80SY5 Krtap16-3-201ENSMUST00000179707 601 ntAPPRIS P1 BASIC15.31■□□□□ 0.04
Prpf38bQ80SY5 Mzt2-201ENSMUST00000023351 1035 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Prpf38bQ80SY5 Nudt17-201ENSMUST00000029742 1039 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Prpf38bQ80SY5 Syt7-204ENSMUST00000223586 1344 ntBASIC15.31■□□□□ 0.04
Prpf38bQ80SY5 Cdcp1-201ENSMUST00000039229 5310 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Prpf38bQ80SY5 AC167013.2-201ENSMUST00000228520 2684 ntBASIC15.31■□□□□ 0.04
Prpf38bQ80SY5 Cchcr1-201ENSMUST00000045956 2748 ntAPPRIS P2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Prpf38bQ80SY5 Serhl-201ENSMUST00000078218 1371 ntAPPRIS P2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Prpf38bQ80SY5 March4-201ENSMUST00000047786 4553 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Prpf38bQ80SY5 Uxs1-202ENSMUST00000126008 4620 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Retrieved 100 of 76,532 protein–RNA pairs in 26.5 ms