Protein–RNA interactions for Protein: Q80SX8

Pif1, ATP-dependent DNA helicase PIF1, mousemouse

Predictions only

Length 650 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pif1Q80SX8 Gm6539-201ENSMUST00000119157 1064 ntBASIC13.52□□□□□ -0.25
Pif1Q80SX8 Gm13823-201ENSMUST00000119930 345 ntBASIC13.52□□□□□ -0.25
Pif1Q80SX8 Prr29-203ENSMUST00000185986 983 ntAPPRIS ALT2 TSL 5 BASIC13.52□□□□□ -0.25
Pif1Q80SX8 1700021A07Rik-203ENSMUST00000188024 404 ntTSL 3 BASIC13.52□□□□□ -0.25
Pif1Q80SX8 Gm37596-201ENSMUST00000193565 1021 ntAPPRIS P1 BASIC13.52□□□□□ -0.25
Pif1Q80SX8 Gm34030-202ENSMUST00000211434 1126 ntTSL 5 BASIC13.52□□□□□ -0.25
Pif1Q80SX8 Gm7730-201ENSMUST00000212486 454 ntBASIC13.52□□□□□ -0.25
Pif1Q80SX8 Dkkl1-201ENSMUST00000033057 1149 ntAPPRIS P2 TSL 1 (best) BASIC13.52□□□□□ -0.25
Pif1Q80SX8 Gbgt1-203ENSMUST00000163121 1335 ntAPPRIS P1 TSL 5 BASIC13.52□□□□□ -0.25
Pif1Q80SX8 Atat1-203ENSMUST00000077494 1340 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.25
Pif1Q80SX8 Egfl7-202ENSMUST00000102907 1372 ntAPPRIS P4 TSL 1 (best) BASIC13.52□□□□□ -0.25
Pif1Q80SX8 Rprd1a-201ENSMUST00000046206 4297 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Pif1Q80SX8 Slc7a15-204ENSMUST00000165657 1467 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
Pif1Q80SX8 Slc7a15-202ENSMUST00000095863 1467 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Pif1Q80SX8 Arxes2-201ENSMUST00000058119 1532 ntAPPRIS P1 BASIC13.52□□□□□ -0.25
Pif1Q80SX8 Procr-201ENSMUST00000029140 1597 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Pif1Q80SX8 Tbc1d1-203ENSMUST00000119756 4760 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.25
Pif1Q80SX8 Lmcd1-201ENSMUST00000032376 1730 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Pif1Q80SX8 Syk-203ENSMUST00000120135 5363 ntAPPRIS P2 TSL 1 (best) BASIC13.52□□□□□ -0.25
Pif1Q80SX8 Mob4-202ENSMUST00000159311 1816 ntTSL 3 BASIC13.52□□□□□ -0.25
Pif1Q80SX8 Osbpl10-201ENSMUST00000046627 1872 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
Pif1Q80SX8 Tmod2-208ENSMUST00000215614 1921 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Pif1Q80SX8 Ppp1r8-201ENSMUST00000030702 2037 ntAPPRIS P3 TSL 1 (best) BASIC13.52□□□□□ -0.25
Pif1Q80SX8 Irf3-201ENSMUST00000003284 2031 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Pif1Q80SX8 Plch2-212ENSMUST00000186598 2119 ntTSL 5 BASIC13.52□□□□□ -0.25
Pif1Q80SX8 Cdhr5-201ENSMUST00000080654 2133 ntAPPRIS P3 TSL 1 (best) BASIC13.52□□□□□ -0.25
Pif1Q80SX8 Zgpat-201ENSMUST00000029105 2293 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Pif1Q80SX8 Pgm2-201ENSMUST00000058351 2371 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Pif1Q80SX8 Mcidas-201ENSMUST00000092089 2377 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Pif1Q80SX8 Stard5-201ENSMUST00000075418 2483 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Pif1Q80SX8 Efcab14-204ENSMUST00000106525 2792 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.25
Pif1Q80SX8 Nrg1-218ENSMUST00000209107 2972 ntAPPRIS ALT2 TSL 5 BASIC13.52□□□□□ -0.25
Pif1Q80SX8 Wipi1-201ENSMUST00000047186 3338 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
Pif1Q80SX8 Barhl1-201ENSMUST00000050776 3666 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Pif1Q80SX8 Tnfaip2-201ENSMUST00000102745 3762 ntAPPRIS P2 TSL 1 (best) BASIC13.52□□□□□ -0.25
Pif1Q80SX8 Lrrc32-203ENSMUST00000205956 4576 ntAPPRIS P1 TSL 5 BASIC13.52□□□□□ -0.25
Pif1Q80SX8 Pum2-202ENSMUST00000111122 6311 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.25
Pif1Q80SX8 Slc22a15-207ENSMUST00000190824 3010 ntTSL 5 BASIC13.51□□□□□ -0.25
Pif1Q80SX8 Farp2-202ENSMUST00000122402 2816 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Pif1Q80SX8 Tmem185b-202ENSMUST00000183952 2824 ntAPPRIS P1 BASIC13.51□□□□□ -0.25
Pif1Q80SX8 Slc35c1-202ENSMUST00000125276 2668 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Pif1Q80SX8 Cbfb-203ENSMUST00000109394 2487 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Pif1Q80SX8 Gadd45gip1-201ENSMUST00000036734 2494 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Pif1Q80SX8 Asic1-205ENSMUST00000228185 1818 ntBASIC13.51□□□□□ -0.25
Pif1Q80SX8 Kat8-201ENSMUST00000033070 1579 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Pif1Q80SX8 Rnf25-201ENSMUST00000027357 1479 ntAPPRIS P3 TSL 1 (best) BASIC13.51□□□□□ -0.25
Pif1Q80SX8 Rfx5-202ENSMUST00000107253 4367 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Pif1Q80SX8 Ubl4b-201ENSMUST00000052853 1387 ntAPPRIS P1 BASIC13.51□□□□□ -0.25
Pif1Q80SX8 Serhl-201ENSMUST00000078218 1371 ntAPPRIS P2 TSL 1 (best) BASIC13.51□□□□□ -0.25
Pif1Q80SX8 Dancr-202ENSMUST00000120364 575 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Pif1Q80SX8 H2-Pa-201ENSMUST00000182803 626 ntBASIC13.51□□□□□ -0.25
Pif1Q80SX8 Gm9063-201ENSMUST00000223299 582 ntBASIC13.51□□□□□ -0.25
Pif1Q80SX8 Pspn-201ENSMUST00000002740 474 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Pif1Q80SX8 Mesp1-201ENSMUST00000032760 1275 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Pif1Q80SX8 Gstp2-201ENSMUST00000042700 770 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Pif1Q80SX8 Guca2b-201ENSMUST00000044426 605 ntAPPRIS P2 TSL 1 (best) BASIC13.51□□□□□ -0.25
Pif1Q80SX8 Med8-203ENSMUST00000084319 1134 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Pif1Q80SX8 Stk40-201ENSMUST00000094761 3492 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Pif1Q80SX8 Ptch1-201ENSMUST00000021921 7725 ntAPPRIS P2 TSL 1 (best) BASIC13.51□□□□□ -0.25
Pif1Q80SX8 Adipor1-201ENSMUST00000027727 3123 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Pif1Q80SX8 Gm37736-201ENSMUST00000193564 2802 ntBASIC13.51□□□□□ -0.25
Pif1Q80SX8 Nap1l4-206ENSMUST00000208190 2259 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Pif1Q80SX8 Hoxb1-201ENSMUST00000019117 2086 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Pif1Q80SX8 March4-201ENSMUST00000047786 4553 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Pif1Q80SX8 Pdpk1-201ENSMUST00000052462 1832 ntAPPRIS ALT2 TSL 1 (best) BASIC13.5□□□□□ -0.25
Pif1Q80SX8 Eif4g1-201ENSMUST00000044783 5444 ntAPPRIS P3 TSL 1 (best) BASIC13.5□□□□□ -0.25
Pif1Q80SX8 Pcdha4-202ENSMUST00000192512 5363 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Pif1Q80SX8 Pcdha5-201ENSMUST00000192168 5206 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Pif1Q80SX8 Gal3st1-203ENSMUST00000109981 1600 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Pif1Q80SX8 Ehd4-201ENSMUST00000028755 3730 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Pif1Q80SX8 Gm5049-201ENSMUST00000195878 1590 ntBASIC13.5□□□□□ -0.25
Pif1Q80SX8 Spsb1-203ENSMUST00000105685 1537 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Pif1Q80SX8 Rasgef1b-206ENSMUST00000161516 2523 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Pif1Q80SX8 Slc43a1-201ENSMUST00000028469 2539 ntAPPRIS ALT2 TSL 1 (best) BASIC13.5□□□□□ -0.25
Pif1Q80SX8 Ldoc1-201ENSMUST00000075983 1459 ntAPPRIS P1 BASIC13.5□□□□□ -0.25
Pif1Q80SX8 Gm45546-201ENSMUST00000211053 2394 ntBASIC13.5□□□□□ -0.25
Pif1Q80SX8 Pcdh20-201ENSMUST00000061628 5241 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Pif1Q80SX8 Mdm1-208ENSMUST00000219087 1318 ntTSL 2 BASIC13.5□□□□□ -0.25
Pif1Q80SX8 Apip-201ENSMUST00000011055 919 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Pif1Q80SX8 Gm7030-203ENSMUST00000173322 913 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Pif1Q80SX8 2700012I20Rik-201ENSMUST00000180525 684 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Pif1Q80SX8 Gtpbp10-211ENSMUST00000198799 648 ntBASIC13.5□□□□□ -0.25
Pif1Q80SX8 Gm45785-201ENSMUST00000209690 988 ntAPPRIS P1 TSL 5 BASIC13.5□□□□□ -0.25
Pif1Q80SX8 Cplx3-202ENSMUST00000215487 594 ntTSL 3 BASIC13.5□□□□□ -0.25
Pif1Q80SX8 Aip-201ENSMUST00000025767 1261 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Pif1Q80SX8 Gm7030-201ENSMUST00000046131 913 ntAPPRIS P1 TSL 5 BASIC13.5□□□□□ -0.25
Pif1Q80SX8 Myl3-201ENSMUST00000079784 937 ntAPPRIS P2 TSL 1 (best) BASIC13.5□□□□□ -0.25
Pif1Q80SX8 Casp16-ps-201ENSMUST00000088673 531 ntAPPRIS P1 TSL 5 BASIC13.5□□□□□ -0.25
Pif1Q80SX8 Pabpn1l-201ENSMUST00000093059 1148 ntAPPRIS P2 TSL 1 (best) BASIC13.5□□□□□ -0.25
Pif1Q80SX8 Cpeb3-212ENSMUST00000154376 5671 ntAPPRIS P3 TSL 1 (best) BASIC13.5□□□□□ -0.25
Pif1Q80SX8 Usp43-201ENSMUST00000021288 4462 ntAPPRIS P3 TSL 1 (best) BASIC13.5□□□□□ -0.25
Pif1Q80SX8 Col13a1-203ENSMUST00000105452 3037 ntAPPRIS ALT2 TSL 5 BASIC13.5□□□□□ -0.25
Pif1Q80SX8 Mllt1-201ENSMUST00000025053 3608 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Pif1Q80SX8 Acot4-201ENSMUST00000021652 6203 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Pif1Q80SX8 Rab3a-204ENSMUST00000110093 1442 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Pif1Q80SX8 Tmem176b-203ENSMUST00000166247 1414 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Pif1Q80SX8 Ankrd27-202ENSMUST00000186245 1926 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Pif1Q80SX8 Zfp36-202ENSMUST00000209061 2465 ntAPPRIS ALT2 BASIC13.49□□□□□ -0.25
Pif1Q80SX8 Slc41a3-202ENSMUST00000044019 2412 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Pif1Q80SX8 Slc44a2-210ENSMUST00000217461 3478 ntAPPRIS ALT1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Retrieved 100 of 76,532 protein–RNA pairs in 31.4 ms