Protein–RNA interactions for Protein: Q70E20

Sned1, Sushi, nidogen and EGF-like domain-containing protein 1, mousemouse

Predictions only

Length 1,403 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sned1Q70E20 Gm27772-201ENSMUST00000184900 187 ntBASIC17.35■□□□□ 0.37
Sned1Q70E20 2010106C02Rik-201ENSMUST00000191222 660 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Sned1Q70E20 Gm45881-201ENSMUST00000210659 517 ntTSL 5 BASIC17.35■□□□□ 0.37
Sned1Q70E20 9230020A06Rik-204ENSMUST00000215201 1116 ntTSL 5 BASIC17.35■□□□□ 0.37
Sned1Q70E20 Dhrs3-207ENSMUST00000171001 1349 ntTSL 5 BASIC17.35■□□□□ 0.37
Sned1Q70E20 Rarg-202ENSMUST00000063339 2718 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
Sned1Q70E20 Ifi35-201ENSMUST00000010502 1362 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Sned1Q70E20 Haus8-202ENSMUST00000110071 1452 ntAPPRIS P3 TSL 1 (best) BASIC17.35■□□□□ 0.37
Sned1Q70E20 Sbds-201ENSMUST00000026387 1548 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Sned1Q70E20 Rps6ka1-201ENSMUST00000003741 3085 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Sned1Q70E20 Gm17705-201ENSMUST00000172285 1555 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Sned1Q70E20 Cyp20a1-201ENSMUST00000060608 2223 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Sned1Q70E20 Ttyh3-202ENSMUST00000197452 4576 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Sned1Q70E20 Apoa5-202ENSMUST00000121598 2515 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Sned1Q70E20 Tmtc3-202ENSMUST00000099318 2794 ntAPPRIS P3 TSL 1 (best) BASIC17.34■□□□□ 0.37
Sned1Q70E20 Abhd5-204ENSMUST00000156520 3157 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Sned1Q70E20 Uso1-204ENSMUST00000202155 3707 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
Sned1Q70E20 Rimklb-201ENSMUST00000068242 4725 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Sned1Q70E20 Aldh16a1-201ENSMUST00000107815 2685 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Sned1Q70E20 Thoc6-204ENSMUST00000115490 1157 ntTSL 5 BASIC17.34■□□□□ 0.37
Sned1Q70E20 Gm12846-201ENSMUST00000120431 1373 ntBASIC17.34■□□□□ 0.37
Sned1Q70E20 Gm13342-201ENSMUST00000121055 207 ntBASIC17.34■□□□□ 0.37
Sned1Q70E20 Egfl7-208ENSMUST00000149789 683 ntTSL 3 BASIC17.34■□□□□ 0.37
Sned1Q70E20 Dnmt3a-205ENSMUST00000172689 2328 ntAPPRIS P3 TSL 1 (best) BASIC17.34■□□□□ 0.37
Sned1Q70E20 F420014N23Rik-201ENSMUST00000181578 2396 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Sned1Q70E20 Gm9124-201ENSMUST00000191789 1092 ntBASIC17.34■□□□□ 0.37
Sned1Q70E20 Gm9113-201ENSMUST00000192510 1018 ntBASIC17.34■□□□□ 0.37
Sned1Q70E20 Gm9131-201ENSMUST00000193557 1089 ntBASIC17.34■□□□□ 0.37
Sned1Q70E20 Gm9121-201ENSMUST00000193749 1071 ntBASIC17.34■□□□□ 0.37
Sned1Q70E20 Gm38223-201ENSMUST00000194484 695 ntBASIC17.34■□□□□ 0.37
Sned1Q70E20 Tmem205-203ENSMUST00000213698 705 ntAPPRIS P1 TSL 3 BASIC17.34■□□□□ 0.37
Sned1Q70E20 Syce1-201ENSMUST00000026553 1460 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Sned1Q70E20 Pex6-201ENSMUST00000002840 3200 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Sned1Q70E20 Atp1a1-201ENSMUST00000036493 3679 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Sned1Q70E20 Rwdd3-201ENSMUST00000039761 1145 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Sned1Q70E20 Fam171a2-201ENSMUST00000049057 3118 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Sned1Q70E20 Epm2a-201ENSMUST00000069106 3287 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Sned1Q70E20 Prss2-201ENSMUST00000070380 815 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Sned1Q70E20 Tmem40-201ENSMUST00000072933 1272 ntAPPRIS P3 TSL 1 (best) BASIC17.34■□□□□ 0.37
Sned1Q70E20 Htatsf1-201ENSMUST00000088652 2810 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Sned1Q70E20 Zxdc-203ENSMUST00000113539 4864 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
Sned1Q70E20 Esco1-203ENSMUST00000115864 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.37
Sned1Q70E20 Foxa3-201ENSMUST00000036018 2037 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Sned1Q70E20 Gm12280-201ENSMUST00000155836 1624 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
Sned1Q70E20 Sox4-201ENSMUST00000067230 4795 ntAPPRIS P1 BASIC17.33■□□□□ 0.37
Sned1Q70E20 Klf4-201ENSMUST00000107619 3029 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Sned1Q70E20 Ece2-204ENSMUST00000133344 3042 ntAPPRIS ALT1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Sned1Q70E20 Inpp5e-202ENSMUST00000114090 2790 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.37
Sned1Q70E20 Art3-204ENSMUST00000119587 1310 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.37
Sned1Q70E20 Fpr1-201ENSMUST00000061516 1324 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Sned1Q70E20 Gm8213-201ENSMUST00000118191 441 ntBASIC17.33■□□□□ 0.36
Sned1Q70E20 Hypk-204ENSMUST00000126764 961 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Sned1Q70E20 Cmc4-203ENSMUST00000149863 507 ntAPPRIS P1 TSL 3 BASIC17.33■□□□□ 0.36
Sned1Q70E20 Gm6152-201ENSMUST00000151704 340 ntBASIC17.33■□□□□ 0.36
Sned1Q70E20 Cd180-203ENSMUST00000170878 842 ntTSL 3 BASIC17.33■□□□□ 0.36
Sned1Q70E20 Cd180-205ENSMUST00000172138 518 ntTSL 2 BASIC17.33■□□□□ 0.36
Sned1Q70E20 D930030I03Rik-201ENSMUST00000180735 920 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
Sned1Q70E20 Gm43133-201ENSMUST00000197472 463 ntBASIC17.33■□□□□ 0.36
Sned1Q70E20 Lsm7-208ENSMUST00000220225 1129 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
Sned1Q70E20 Ndufb3-201ENSMUST00000027193 763 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Sned1Q70E20 Rhoj-202ENSMUST00000118602 2396 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
Sned1Q70E20 Ttc34-203ENSMUST00000207854 4733 ntAPPRIS ALT2 TSL 5 BASIC17.33■□□□□ 0.36
Sned1Q70E20 Bet1l-201ENSMUST00000026557 2268 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Sned1Q70E20 Fads3-201ENSMUST00000115995 3269 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Sned1Q70E20 Sorcs2-201ENSMUST00000037370 5707 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Sned1Q70E20 Zfp977-201ENSMUST00000173283 1425 ntAPPRIS P1 TSL 2 BASIC17.32■□□□□ 0.36
Sned1Q70E20 Gm6297-201ENSMUST00000181475 2146 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Sned1Q70E20 Maged1-201ENSMUST00000026142 2821 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Sned1Q70E20 Trip4-201ENSMUST00000117083 1999 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Sned1Q70E20 Slc29a1-203ENSMUST00000097317 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
Sned1Q70E20 Hnf4aos-203ENSMUST00000141329 839 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Sned1Q70E20 1700012C08Rik-201ENSMUST00000141554 363 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Sned1Q70E20 Gm12349-201ENSMUST00000153030 657 ntTSL 3 BASIC17.32■□□□□ 0.36
Sned1Q70E20 Gm4271-201ENSMUST00000174444 973 ntBASIC17.32■□□□□ 0.36
Sned1Q70E20 Gm26894-201ENSMUST00000180828 1134 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Sned1Q70E20 Mir7070-201ENSMUST00000183657 86 ntBASIC17.32■□□□□ 0.36
Sned1Q70E20 Gm45233-201ENSMUST00000203633 898 ntAPPRIS P5 TSL 5 BASIC17.32■□□□□ 0.36
Sned1Q70E20 Caly-203ENSMUST00000211044 1029 ntAPPRIS P1 TSL 5 BASIC17.32■□□□□ 0.36
Sned1Q70E20 AC167229.2-201ENSMUST00000218902 675 ntTSL 5 BASIC17.32■□□□□ 0.36
Sned1Q70E20 Sphk1-202ENSMUST00000063446 2527 ntAPPRIS ALT2 TSL 2 BASIC17.32■□□□□ 0.36
Sned1Q70E20 Asic3-201ENSMUST00000049346 1853 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Sned1Q70E20 Amigo1-202ENSMUST00000106656 5482 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Sned1Q70E20 Nrxn2-201ENSMUST00000077182 6059 ntAPPRIS ALT2 TSL 5 BASIC17.32■□□□□ 0.36
Sned1Q70E20 Ogfr-201ENSMUST00000029087 2449 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Sned1Q70E20 Fam110a-201ENSMUST00000062047 1754 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Sned1Q70E20 Disp3-201ENSMUST00000047720 5282 ntAPPRIS P1 TSL 5 BASIC17.32■□□□□ 0.36
Sned1Q70E20 Apba3-211ENSMUST00000220297 2268 ntAPPRIS P1 TSL 5 BASIC17.32■□□□□ 0.36
Sned1Q70E20 Dao-203ENSMUST00000161610 1633 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Sned1Q70E20 Tmcc1-202ENSMUST00000088896 5838 ntAPPRIS P2 TSL 1 (best) BASIC17.32■□□□□ 0.36
Sned1Q70E20 Tpm2-202ENSMUST00000107913 2098 ntAPPRIS P3 TSL 1 (best) BASIC17.32■□□□□ 0.36
Sned1Q70E20 Dek-201ENSMUST00000021807 2556 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Sned1Q70E20 Ilf2-201ENSMUST00000001042 2027 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Sned1Q70E20 Wdr53-201ENSMUST00000023474 1394 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Sned1Q70E20 Cwh43-201ENSMUST00000031040 2716 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Sned1Q70E20 Sfta3-ps-205ENSMUST00000220379 2187 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Sned1Q70E20 Dhrs3-202ENSMUST00000105744 1226 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Sned1Q70E20 Gm12203-201ENSMUST00000118235 598 ntBASIC17.31■□□□□ 0.36
Sned1Q70E20 Gm12209-201ENSMUST00000120089 596 ntBASIC17.31■□□□□ 0.36
Sned1Q70E20 Gm11557-201ENSMUST00000120200 1008 ntBASIC17.31■□□□□ 0.36
Sned1Q70E20 Ly6g5b-202ENSMUST00000172854 1176 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
Retrieved 100 of 76,532 protein–RNA pairs in 53.5 ms