Protein–RNA interactions for Protein: Q6PFF0

Scaf4, SR-related CTD-associated factor 4, mousemouse

Known RBP Predictions only

Length 1,209 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scaf4Q6PFF0 Synm-201ENSMUST00000051389 6953 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
Scaf4Q6PFF0 Cblb-204ENSMUST00000227062 3728 ntAPPRIS P2 BASIC14.44□□□□□ -0.1
Scaf4Q6PFF0 Tspan32-204ENSMUST00000105923 1499 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Scaf4Q6PFF0 Tfe3-201ENSMUST00000077680 3277 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Scaf4Q6PFF0 Mast2-201ENSMUST00000003908 5445 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
Scaf4Q6PFF0 Gpr137b-202ENSMUST00000220628 3634 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Scaf4Q6PFF0 Elovl1-201ENSMUST00000006557 1811 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Scaf4Q6PFF0 Gm8749-201ENSMUST00000117737 331 ntBASIC14.44□□□□□ -0.1
Scaf4Q6PFF0 Gm9726-201ENSMUST00000180321 678 ntBASIC14.44□□□□□ -0.1
Scaf4Q6PFF0 Dusp13-213ENSMUST00000184703 902 ntAPPRIS ALT1 TSL 5 BASIC14.44□□□□□ -0.1
Scaf4Q6PFF0 AC140264.2-201ENSMUST00000219668 289 ntTSL 2 BASIC14.44□□□□□ -0.1
Scaf4Q6PFF0 AC147366.1-201ENSMUST00000227671 852 ntBASIC14.44□□□□□ -0.1
Scaf4Q6PFF0 Ppib-201ENSMUST00000034947 892 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Scaf4Q6PFF0 Rpl8-201ENSMUST00000004072 862 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Scaf4Q6PFF0 Chmp2a-201ENSMUST00000005711 949 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Scaf4Q6PFF0 Lce1i-201ENSMUST00000090866 731 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Scaf4Q6PFF0 Dhx9-201ENSMUST00000042141 4616 ntAPPRIS ALT2 TSL 5 BASIC14.44□□□□□ -0.1
Scaf4Q6PFF0 Piezo1-209ENSMUST00000156333 8219 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
Scaf4Q6PFF0 Piezo1-201ENSMUST00000067252 8216 ntAPPRIS P2 TSL 5 BASIC14.44□□□□□ -0.1
Scaf4Q6PFF0 Shmt1-201ENSMUST00000018744 2858 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Scaf4Q6PFF0 Map7d1-201ENSMUST00000061143 3351 ntAPPRIS P3 TSL 1 (best) BASIC14.44□□□□□ -0.1
Scaf4Q6PFF0 Chrnb1-201ENSMUST00000045971 2155 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Scaf4Q6PFF0 Tspyl1-201ENSMUST00000061372 3086 ntAPPRIS P1 BASIC14.44□□□□□ -0.1
Scaf4Q6PFF0 Cpne6-202ENSMUST00000163767 2004 ntAPPRIS P3 TSL 1 (best) BASIC14.44□□□□□ -0.1
Scaf4Q6PFF0 Acadm-201ENSMUST00000072697 2047 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Scaf4Q6PFF0 Hp1bp3-204ENSMUST00000105826 3348 ntAPPRIS ALT2 TSL 5 BASIC14.44□□□□□ -0.1
Scaf4Q6PFF0 Aldh1a2-201ENSMUST00000034723 2264 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Scaf4Q6PFF0 Tagap1-201ENSMUST00000063683 2358 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Scaf4Q6PFF0 H2-T23-201ENSMUST00000102678 1472 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Scaf4Q6PFF0 Tbc1d16-203ENSMUST00000207655 2855 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
Scaf4Q6PFF0 Rnf122-205ENSMUST00000217278 1726 ntAPPRIS ALT1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Scaf4Q6PFF0 Jph3-201ENSMUST00000026357 3637 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Scaf4Q6PFF0 Mtrr-209ENSMUST00000223398 3861 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Scaf4Q6PFF0 2010300F17Rik-202ENSMUST00000181758 2493 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Scaf4Q6PFF0 Cobll1-201ENSMUST00000090896 4867 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
Scaf4Q6PFF0 Spg20-204ENSMUST00000118118 3981 ntAPPRIS P3 TSL 1 (best) BASIC14.43□□□□□ -0.1
Scaf4Q6PFF0 Gm3928-201ENSMUST00000121141 1307 ntBASIC14.43□□□□□ -0.1
Scaf4Q6PFF0 Dmkn-205ENSMUST00000165887 2063 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
Scaf4Q6PFF0 Ccdc157-202ENSMUST00000101626 5153 ntAPPRIS P3 TSL 1 (best) BASIC14.43□□□□□ -0.1
Scaf4Q6PFF0 4632428C04Rik-201ENSMUST00000181485 2430 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Scaf4Q6PFF0 Vwa2-201ENSMUST00000026068 4049 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Scaf4Q6PFF0 Traf2-201ENSMUST00000028311 3044 ntAPPRIS P3 TSL 1 (best) BASIC14.43□□□□□ -0.1
Scaf4Q6PFF0 Erc1-207ENSMUST00000183911 3865 ntTSL 5 BASIC14.43□□□□□ -0.1
Scaf4Q6PFF0 Kcnj8-201ENSMUST00000032374 2269 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Scaf4Q6PFF0 Scube1-201ENSMUST00000016907 3991 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
Scaf4Q6PFF0 Tnfsf13-202ENSMUST00000108648 1503 ntAPPRIS ALT2 TSL 5 BASIC14.43□□□□□ -0.1
Scaf4Q6PFF0 Mterf4-202ENSMUST00000112942 1525 ntTSL 2 BASIC14.43□□□□□ -0.1
Scaf4Q6PFF0 Zfp74-203ENSMUST00000108211 1278 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Scaf4Q6PFF0 Gm13418-201ENSMUST00000119097 944 ntBASIC14.43□□□□□ -0.1
Scaf4Q6PFF0 5830454E08Rik-202ENSMUST00000213974 744 ntBASIC14.43□□□□□ -0.1
Scaf4Q6PFF0 AC159301.1-201ENSMUST00000225130 1182 ntBASIC14.43□□□□□ -0.1
Scaf4Q6PFF0 Kcnk16-201ENSMUST00000024155 916 ntAPPRIS P1 TSL 5 BASIC14.43□□□□□ -0.1
Scaf4Q6PFF0 Vkorc1-201ENSMUST00000033074 748 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Scaf4Q6PFF0 Sdhc-201ENSMUST00000081560 815 ntTSL 3 BASIC14.43□□□□□ -0.1
Scaf4Q6PFF0 Lce3f-201ENSMUST00000090863 611 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Scaf4Q6PFF0 Ahnak-201ENSMUST00000092955 1046 ntAPPRIS ALT2 TSL 2 BASIC14.43□□□□□ -0.1
Scaf4Q6PFF0 Mybl1-201ENSMUST00000088658 4980 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Scaf4Q6PFF0 Brpf1-210ENSMUST00000204626 4381 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
Scaf4Q6PFF0 AU040320-201ENSMUST00000047431 4384 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
Scaf4Q6PFF0 Gm2895-201ENSMUST00000171591 3194 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Scaf4Q6PFF0 Zfp57-211ENSMUST00000174524 1747 ntAPPRIS P3 TSL 1 (best) BASIC14.43□□□□□ -0.1
Scaf4Q6PFF0 Tmem19-203ENSMUST00000217884 2799 ntTSL 5 BASIC14.43□□□□□ -0.1
Scaf4Q6PFF0 Gins3-201ENSMUST00000034094 2519 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Scaf4Q6PFF0 Sipa1-204ENSMUST00000169854 3583 ntAPPRIS P1 TSL 5 BASIC14.43□□□□□ -0.1
Scaf4Q6PFF0 Mfrp-202ENSMUST00000161381 4254 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
Scaf4Q6PFF0 Krt23-201ENSMUST00000006969 1565 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Scaf4Q6PFF0 Lman2-201ENSMUST00000021940 4315 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Scaf4Q6PFF0 Marveld3-201ENSMUST00000001722 1330 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Scaf4Q6PFF0 Prpf3-201ENSMUST00000015892 2933 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Scaf4Q6PFF0 Dnajb12-205ENSMUST00000147914 3041 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Scaf4Q6PFF0 Tmem241-205ENSMUST00000209859 1426 ntAPPRIS P4 TSL 1 (best) BASIC14.42□□□□□ -0.1
Scaf4Q6PFF0 Cdh7-206ENSMUST00000137092 2681 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Scaf4Q6PFF0 Epsti1-201ENSMUST00000022591 1870 ntAPPRIS P2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Scaf4Q6PFF0 Ggh-201ENSMUST00000098242 1965 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Scaf4Q6PFF0 Pik3c2b-201ENSMUST00000077730 7928 ntAPPRIS P1 TSL 5 BASIC14.42□□□□□ -0.1
Scaf4Q6PFF0 Narfl-204ENSMUST00000134108 2062 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Scaf4Q6PFF0 Popdc2-201ENSMUST00000023494 2169 ntAPPRIS P4 TSL 1 (best) BASIC14.42□□□□□ -0.1
Scaf4Q6PFF0 Enpp1-203ENSMUST00000135846 2721 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Scaf4Q6PFF0 Gm15593-201ENSMUST00000122085 1008 ntBASIC14.42□□□□□ -0.1
Scaf4Q6PFF0 Hbb-bh0-201ENSMUST00000124800 129 ntBASIC14.42□□□□□ -0.1
Scaf4Q6PFF0 Nabp2-204ENSMUST00000166608 979 ntTSL 5 BASIC14.42□□□□□ -0.1
Scaf4Q6PFF0 Tbc1d7-202ENSMUST00000179852 1246 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Scaf4Q6PFF0 Rbm14-203ENSMUST00000180008 370 ntTSL 5 BASIC14.42□□□□□ -0.1
Scaf4Q6PFF0 Dusp13-208ENSMUST00000183698 1019 ntTSL 5 BASIC14.42□□□□□ -0.1
Scaf4Q6PFF0 Gm33142-201ENSMUST00000193913 867 ntBASIC14.42□□□□□ -0.1
Scaf4Q6PFF0 Ssr2-205ENSMUST00000193934 569 ntTSL 3 BASIC14.42□□□□□ -0.1
Scaf4Q6PFF0 AC154757.1-201ENSMUST00000228289 336 ntBASIC14.42□□□□□ -0.1
Scaf4Q6PFF0 Magohb-201ENSMUST00000032307 767 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Scaf4Q6PFF0 Stat3-201ENSMUST00000092671 2927 ntAPPRIS ALT1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Scaf4Q6PFF0 Rbm33-202ENSMUST00000059644 9510 ntAPPRIS P2 TSL 5 BASIC14.42□□□□□ -0.1
Scaf4Q6PFF0 Erg-206ENSMUST00000122199 2007 ntAPPRIS ALT1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Scaf4Q6PFF0 Syt13-201ENSMUST00000028648 3761 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Scaf4Q6PFF0 Mccc2-201ENSMUST00000022148 2123 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Scaf4Q6PFF0 Prr18-201ENSMUST00000069742 3407 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Scaf4Q6PFF0 AC013548.1-201ENSMUST00000228850 4738 ntAPPRIS P1 BASIC14.42□□□□□ -0.1
Scaf4Q6PFF0 Asic3-201ENSMUST00000049346 1853 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Scaf4Q6PFF0 Pnkd-201ENSMUST00000027370 2937 ntAPPRIS P2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Scaf4Q6PFF0 Atp2b3-201ENSMUST00000033744 3894 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Scaf4Q6PFF0 Renbp-201ENSMUST00000114379 1318 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Scaf4Q6PFF0 Pmm1-201ENSMUST00000023112 1300 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Retrieved 100 of 76,532 protein–RNA pairs in 22.7 ms