Protein–RNA interactions for Protein: Q6PE54

Dhx40, Probable ATP-dependent RNA helicase DHX40, mousemouse

Known RBP Predictions only

Length 779 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Dhx40Q6PE54 Lyrm1-203ENSMUST00000106517 1279 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Dhx40Q6PE54 Dgcr6-208ENSMUST00000153123 920 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
Dhx40Q6PE54 Shisa5-218ENSMUST00000200515 1005 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
Dhx40Q6PE54 Gm32031-203ENSMUST00000208993 649 ntTSL 2 BASIC16.25■□□□□ 0.19
Dhx40Q6PE54 Vkorc1-201ENSMUST00000033074 748 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Dhx40Q6PE54 Ndufb10-201ENSMUST00000045602 732 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Dhx40Q6PE54 Prss23-201ENSMUST00000041761 3228 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Dhx40Q6PE54 Avpr1a-201ENSMUST00000020323 2670 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Dhx40Q6PE54 Upk1a-201ENSMUST00000006476 1421 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Dhx40Q6PE54 Fam83g-202ENSMUST00000093019 4778 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Dhx40Q6PE54 Mrc2-202ENSMUST00000100335 5795 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Dhx40Q6PE54 5730559C18Rik-201ENSMUST00000120339 2988 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Dhx40Q6PE54 Hlcs-205ENSMUST00000227141 4021 ntAPPRIS ALT2 BASIC16.25■□□□□ 0.19
Dhx40Q6PE54 Osm-201ENSMUST00000075221 2272 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Dhx40Q6PE54 Traf1-201ENSMUST00000028234 2069 ntAPPRIS P1 TSL 5 BASIC16.25■□□□□ 0.19
Dhx40Q6PE54 Cask-203ENSMUST00000115436 8260 ntAPPRIS P1 TSL 2 BASIC16.25■□□□□ 0.19
Dhx40Q6PE54 Cgnl1-203ENSMUST00000122065 4487 ntAPPRIS P2 TSL 1 (best) BASIC16.25■□□□□ 0.19
Dhx40Q6PE54 P2rx6-203ENSMUST00000171002 1353 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
Dhx40Q6PE54 Tepsin-203ENSMUST00000106225 2566 ntAPPRIS ALT2 TSL 5 BASIC16.25■□□□□ 0.19
Dhx40Q6PE54 Sema4b-204ENSMUST00000205822 3760 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Dhx40Q6PE54 Mycbpap-201ENSMUST00000040692 1512 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
Dhx40Q6PE54 Ptbp3-205ENSMUST00000148331 2016 ntAPPRIS ALT2 TSL 5 BASIC16.24■□□□□ 0.19
Dhx40Q6PE54 Rcan1-201ENSMUST00000023672 2192 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Dhx40Q6PE54 Rbm47-201ENSMUST00000094756 2973 ntAPPRIS ALT2 TSL 1 (best) BASIC16.24■□□□□ 0.19
Dhx40Q6PE54 Gm13387-202ENSMUST00000131147 2646 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
Dhx40Q6PE54 Phf12-201ENSMUST00000049167 4410 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Dhx40Q6PE54 4632404H12Rik-201ENSMUST00000038450 2791 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
Dhx40Q6PE54 Ap4e1-203ENSMUST00000110394 2271 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
Dhx40Q6PE54 Slc8b1-203ENSMUST00000111889 1624 ntAPPRIS ALT2 TSL 5 BASIC16.24■□□□□ 0.19
Dhx40Q6PE54 Chac1-201ENSMUST00000028780 1637 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Dhx40Q6PE54 Trnt1-201ENSMUST00000057578 2283 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Dhx40Q6PE54 Prrx1-202ENSMUST00000075805 4986 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
Dhx40Q6PE54 Gm45630-201ENSMUST00000210243 1911 ntBASIC16.24■□□□□ 0.19
Dhx40Q6PE54 Rhox13-201ENSMUST00000152730 876 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Dhx40Q6PE54 Tnnt2-205ENSMUST00000178204 1172 ntAPPRIS ALT2 TSL 5 BASIC16.24■□□□□ 0.19
Dhx40Q6PE54 Tnnt2-207ENSMUST00000179863 1097 ntAPPRIS P4 TSL 5 BASIC16.24■□□□□ 0.19
Dhx40Q6PE54 Tnnt2-209ENSMUST00000188028 1200 ntAPPRIS P4 TSL 5 BASIC16.24■□□□□ 0.19
Dhx40Q6PE54 Lat-206ENSMUST00000206793 1215 ntAPPRIS ALT2 TSL 5 BASIC16.24■□□□□ 0.19
Dhx40Q6PE54 Gm6376-201ENSMUST00000209407 580 ntBASIC16.24■□□□□ 0.19
Dhx40Q6PE54 Hmgb1-rs17-201ENSMUST00000210634 972 ntBASIC16.24■□□□□ 0.19
Dhx40Q6PE54 Plpp2-205ENSMUST00000218241 825 ntAPPRIS ALT2 TSL 3 BASIC16.24■□□□□ 0.19
Dhx40Q6PE54 Idnk-201ENSMUST00000051490 764 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Dhx40Q6PE54 Scamp1-201ENSMUST00000022197 4259 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Dhx40Q6PE54 Arid3c-201ENSMUST00000084698 1417 ntAPPRIS P3 TSL 1 (best) BASIC16.24■□□□□ 0.19
Dhx40Q6PE54 Ush1c-207ENSMUST00000176371 1865 ntAPPRIS ALT2 TSL 5 BASIC16.24■□□□□ 0.19
Dhx40Q6PE54 Hsph1-205ENSMUST00000201452 3140 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Dhx40Q6PE54 Epsti1-201ENSMUST00000022591 1870 ntAPPRIS P2 TSL 1 (best) BASIC16.24■□□□□ 0.19
Dhx40Q6PE54 Pqbp1-202ENSMUST00000115654 1374 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Dhx40Q6PE54 Pfkfb3-205ENSMUST00000114845 1971 ntTSL 5 BASIC16.24■□□□□ 0.19
Dhx40Q6PE54 R3hcc1-202ENSMUST00000121142 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC16.24■□□□□ 0.19
Dhx40Q6PE54 4930579G24Rik-201ENSMUST00000029388 1970 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Dhx40Q6PE54 Arhgap4-204ENSMUST00000114406 2749 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
Dhx40Q6PE54 Slc41a1-201ENSMUST00000086559 4697 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Dhx40Q6PE54 Fam234a-201ENSMUST00000114988 3714 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Dhx40Q6PE54 Noct-203ENSMUST00000167780 2992 ntAPPRIS P2 TSL 5 BASIC16.23■□□□□ 0.19
Dhx40Q6PE54 Nsd3-211ENSMUST00000155861 2834 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
Dhx40Q6PE54 Rxrg-202ENSMUST00000111380 1630 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
Dhx40Q6PE54 Adam10-201ENSMUST00000067880 4593 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Dhx40Q6PE54 Gins4-201ENSMUST00000033950 1349 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Dhx40Q6PE54 Dhrs3-206ENSMUST00000154208 2337 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Dhx40Q6PE54 Tmem30a-202ENSMUST00000120690 3627 ntAPPRIS ALT2 TSL 5 BASIC16.23■□□□□ 0.19
Dhx40Q6PE54 Ash2l-201ENSMUST00000068892 3307 ntAPPRIS P4 TSL 1 (best) BASIC16.23■□□□□ 0.19
Dhx40Q6PE54 Tmem38b-201ENSMUST00000030127 2862 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Dhx40Q6PE54 Cblb-204ENSMUST00000227062 3728 ntAPPRIS P2 BASIC16.23■□□□□ 0.19
Dhx40Q6PE54 Sipa1-204ENSMUST00000169854 3583 ntAPPRIS P1 TSL 5 BASIC16.23■□□□□ 0.19
Dhx40Q6PE54 Gm15635-203ENSMUST00000148972 554 ntTSL 2 BASIC16.23■□□□□ 0.19
Dhx40Q6PE54 Tmem255b-201ENSMUST00000167071 1138 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
Dhx40Q6PE54 Gm10419-203ENSMUST00000197854 653 ntTSL 5 BASIC16.23■□□□□ 0.19
Dhx40Q6PE54 Gm45167-201ENSMUST00000208007 322 ntBASIC16.23■□□□□ 0.19
Dhx40Q6PE54 Vmn2r-ps89-201ENSMUST00000209195 1010 ntBASIC16.23■□□□□ 0.19
Dhx40Q6PE54 Gm33054-201ENSMUST00000216588 313 ntTSL 5 BASIC16.23■□□□□ 0.19
Dhx40Q6PE54 Rph3al-202ENSMUST00000066504 988 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Dhx40Q6PE54 Rrp1-201ENSMUST00000062678 1984 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Dhx40Q6PE54 Myh14-204ENSMUST00000207775 6499 ntAPPRIS ALT2 TSL 5 BASIC16.23■□□□□ 0.19
Dhx40Q6PE54 Gpr137b-202ENSMUST00000220628 3634 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
Dhx40Q6PE54 Ntrk2-209ENSMUST00000225950 2640 ntBASIC16.23■□□□□ 0.19
Dhx40Q6PE54 Gm18856-201ENSMUST00000178096 1374 ntBASIC16.23■□□□□ 0.19
Dhx40Q6PE54 Adam23-201ENSMUST00000087374 6426 ntAPPRIS P2 TSL 1 (best) BASIC16.23■□□□□ 0.19
Dhx40Q6PE54 AC148324.1-201ENSMUST00000219034 4240 ntBASIC16.23■□□□□ 0.19
Dhx40Q6PE54 Cd72-202ENSMUST00000098104 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC16.23■□□□□ 0.19
Dhx40Q6PE54 Dnase1l1-201ENSMUST00000019232 1625 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Dhx40Q6PE54 Ash2l-202ENSMUST00000110608 2134 ntTSL 5 BASIC16.22■□□□□ 0.19
Dhx40Q6PE54 Nipal3-201ENSMUST00000102549 5153 ntAPPRIS P3 TSL 1 (best) BASIC16.22■□□□□ 0.19
Dhx40Q6PE54 Srgn-204ENSMUST00000160987 1727 ntAPPRIS P1 TSL 3 BASIC16.22■□□□□ 0.19
Dhx40Q6PE54 Arfip1-203ENSMUST00000143514 1343 ntAPPRIS P1 TSL 5 BASIC16.22■□□□□ 0.19
Dhx40Q6PE54 Lrrc25-201ENSMUST00000052437 1313 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Dhx40Q6PE54 Gopc-201ENSMUST00000020008 4216 ntAPPRIS P2 TSL 1 (best) BASIC16.22■□□□□ 0.19
Dhx40Q6PE54 Zfp467-205ENSMUST00000114560 3266 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Dhx40Q6PE54 Kcnip1-202ENSMUST00000101368 2322 ntTSL 2 BASIC16.22■□□□□ 0.19
Dhx40Q6PE54 1810062O18Rik-203ENSMUST00000129237 647 ntTSL 5 BASIC16.22■□□□□ 0.19
Dhx40Q6PE54 A930006K02Rik-201ENSMUST00000149172 776 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
Dhx40Q6PE54 Tmprss5-204ENSMUST00000167095 1146 ntAPPRIS ALT2 TSL 5 BASIC16.22■□□□□ 0.19
Dhx40Q6PE54 6430573P05Rik-202ENSMUST00000192648 597 ntTSL 3 BASIC16.22■□□□□ 0.19
Dhx40Q6PE54 Timm10b-211ENSMUST00000210350 529 ntAPPRIS ALT2 TSL 2 BASIC16.22■□□□□ 0.19
Dhx40Q6PE54 Cd300c-201ENSMUST00000061637 690 ntAPPRIS ALT2 TSL 5 BASIC16.22■□□□□ 0.19
Dhx40Q6PE54 Rps4l-201ENSMUST00000071745 943 ntBASIC16.22■□□□□ 0.19
Dhx40Q6PE54 4930431F12Rik-201ENSMUST00000079389 429 ntTSL 5 BASIC16.22■□□□□ 0.19
Dhx40Q6PE54 Cd300c-202ENSMUST00000092466 700 ntAPPRIS P5 TSL 5 BASIC16.22■□□□□ 0.19
Dhx40Q6PE54 Tfdp2-201ENSMUST00000034982 7354 ntAPPRIS P3 TSL 1 (best) BASIC16.22■□□□□ 0.19
Dhx40Q6PE54 Erg-206ENSMUST00000122199 2007 ntAPPRIS ALT1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Retrieved 100 of 76,532 protein–RNA pairs in 29.4 ms