Protein–RNA interactions for Protein: Q6PE01

Snrnp40, U5 small nuclear ribonucleoprotein 40 kDa protein, mousemouse

Predictions only

Length 358 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Snrnp40Q6PE01 Hivep3-201ENSMUST00000084306 2973 ntBASIC12.82□□□□□ -0.36
Snrnp40Q6PE01 E530011L22Rik-201ENSMUST00000181325 5282 ntBASIC12.82□□□□□ -0.36
Snrnp40Q6PE01 Slc35f1-201ENSMUST00000105473 4941 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Snrnp40Q6PE01 Sptlc2-201ENSMUST00000021424 6710 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Snrnp40Q6PE01 Wisp3-201ENSMUST00000076713 1419 ntAPPRIS P1 TSL 5 BASIC12.82□□□□□ -0.36
Snrnp40Q6PE01 Fzd7-201ENSMUST00000114246 4532 ntAPPRIS P1 BASIC12.82□□□□□ -0.36
Snrnp40Q6PE01 Spire2-202ENSMUST00000212404 2158 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Snrnp40Q6PE01 Wasf1-202ENSMUST00000105509 2719 ntAPPRIS P1 TSL 5 BASIC12.82□□□□□ -0.36
Snrnp40Q6PE01 Nmi-202ENSMUST00000112705 1130 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Snrnp40Q6PE01 Sumo2-204ENSMUST00000118155 884 ntTSL 2 BASIC12.82□□□□□ -0.36
Snrnp40Q6PE01 Klk12-201ENSMUST00000014063 924 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Snrnp40Q6PE01 Olfr455-201ENSMUST00000171307 954 ntAPPRIS P1 BASIC12.82□□□□□ -0.36
Snrnp40Q6PE01 Platr12-202ENSMUST00000189722 549 ntTSL 3 BASIC12.82□□□□□ -0.36
Snrnp40Q6PE01 1700029B24Rik-201ENSMUST00000194040 497 ntBASIC12.82□□□□□ -0.36
Snrnp40Q6PE01 Gm5035-201ENSMUST00000215581 927 ntBASIC12.82□□□□□ -0.36
Snrnp40Q6PE01 CT030657.3-201ENSMUST00000222707 1200 ntBASIC12.82□□□□□ -0.36
Snrnp40Q6PE01 Tmem253-203ENSMUST00000227295 704 ntAPPRIS ALT2 BASIC12.82□□□□□ -0.36
Snrnp40Q6PE01 Rnf113a1-201ENSMUST00000046433 1223 ntAPPRIS P1 BASIC12.82□□□□□ -0.36
Snrnp40Q6PE01 Casz1-202ENSMUST00000122222 7926 ntAPPRIS P1 TSL 5 BASIC12.82□□□□□ -0.36
Snrnp40Q6PE01 Mxd4-201ENSMUST00000042701 3872 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Snrnp40Q6PE01 Gm13589-201ENSMUST00000146404 1675 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Snrnp40Q6PE01 Chmp4c-201ENSMUST00000029049 6188 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Snrnp40Q6PE01 Gm16754-201ENSMUST00000181222 2077 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Snrnp40Q6PE01 Hs3st3b1-201ENSMUST00000094103 4911 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Snrnp40Q6PE01 Cxxc5-201ENSMUST00000060722 2271 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Snrnp40Q6PE01 Slc17a9-201ENSMUST00000094218 2275 ntAPPRIS P1 TSL 5 BASIC12.82□□□□□ -0.36
Snrnp40Q6PE01 Ints8-203ENSMUST00000108319 3220 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Snrnp40Q6PE01 Ina-201ENSMUST00000037636 3240 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Snrnp40Q6PE01 Aipl1-201ENSMUST00000048207 2309 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Snrnp40Q6PE01 Atp6v0a1-203ENSMUST00000103110 2716 ntTSL 5 BASIC12.82□□□□□ -0.36
Snrnp40Q6PE01 Slco3a1-202ENSMUST00000098371 2709 ntAPPRIS ALT1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Snrnp40Q6PE01 Mapk8ip3-201ENSMUST00000088345 5543 ntAPPRIS P3 TSL 1 (best) BASIC12.81□□□□□ -0.36
Snrnp40Q6PE01 Dynlt1c-201ENSMUST00000092966 2589 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Snrnp40Q6PE01 Slc4a7-201ENSMUST00000057015 8132 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Snrnp40Q6PE01 Rhot1-201ENSMUST00000017831 3029 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Snrnp40Q6PE01 Clcc1-201ENSMUST00000029483 2224 ntAPPRIS P3 TSL 5 BASIC12.81□□□□□ -0.36
Snrnp40Q6PE01 Serpine3-201ENSMUST00000171692 1402 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Snrnp40Q6PE01 Kdr-201ENSMUST00000113516 5924 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Snrnp40Q6PE01 Ppef2-201ENSMUST00000031359 2274 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Snrnp40Q6PE01 Shank1-202ENSMUST00000107935 6649 ntAPPRIS ALT2 TSL 5 BASIC12.81□□□□□ -0.36
Snrnp40Q6PE01 Cd5-201ENSMUST00000025571 2069 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Snrnp40Q6PE01 Slc13a3-202ENSMUST00000109279 3131 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Snrnp40Q6PE01 Ogfrl1-201ENSMUST00000027343 4844 ntAPPRIS P1 TSL 3 BASIC12.81□□□□□ -0.36
Snrnp40Q6PE01 Vwa5b2-203ENSMUST00000100074 2512 ntAPPRIS P3 TSL 1 (best) BASIC12.81□□□□□ -0.36
Snrnp40Q6PE01 Gm13496-201ENSMUST00000141133 1165 ntTSL 2 BASIC12.81□□□□□ -0.36
Snrnp40Q6PE01 Snx14-206ENSMUST00000173039 2970 ntTSL 5 BASIC12.81□□□□□ -0.36
Snrnp40Q6PE01 Ube2i-211ENSMUST00000173713 890 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Snrnp40Q6PE01 AY702102-202ENSMUST00000194651 1173 ntBASIC12.81□□□□□ -0.36
Snrnp40Q6PE01 Gm6007-201ENSMUST00000208170 823 ntBASIC12.81□□□□□ -0.36
Snrnp40Q6PE01 Gm4129-201ENSMUST00000220083 625 ntTSL 3 BASIC12.81□□□□□ -0.36
Snrnp40Q6PE01 Pcgf1-201ENSMUST00000092614 866 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Snrnp40Q6PE01 Gm11696-201ENSMUST00000070956 2765 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Snrnp40Q6PE01 Nek2-201ENSMUST00000027931 3227 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Snrnp40Q6PE01 Cyp4f18-201ENSMUST00000003574 1702 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Snrnp40Q6PE01 Lrriq4-202ENSMUST00000108267 2387 ntAPPRIS P3 TSL 1 (best) BASIC12.81□□□□□ -0.36
Snrnp40Q6PE01 Spon1-202ENSMUST00000084696 5201 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Snrnp40Q6PE01 BC001981-202ENSMUST00000191393 1545 ntBASIC12.81□□□□□ -0.36
Snrnp40Q6PE01 N6amt1-202ENSMUST00000118115 1951 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Snrnp40Q6PE01 Cd300lf-203ENSMUST00000106562 1762 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Snrnp40Q6PE01 Kcnj14-201ENSMUST00000071937 2681 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Snrnp40Q6PE01 Coro6-205ENSMUST00000108391 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Snrnp40Q6PE01 Zfp868-202ENSMUST00000121886 2259 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Snrnp40Q6PE01 Trim11-201ENSMUST00000093061 2251 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Snrnp40Q6PE01 Ncmap-204ENSMUST00000105859 1801 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Snrnp40Q6PE01 Vdac3-201ENSMUST00000009036 1354 ntAPPRIS P2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Snrnp40Q6PE01 Zfp422-203ENSMUST00000112880 2523 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Snrnp40Q6PE01 Apeh-206ENSMUST00000193254 2518 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Snrnp40Q6PE01 Tyw1-203ENSMUST00000100662 1867 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Snrnp40Q6PE01 AC163637.1-201ENSMUST00000215491 1894 ntBASIC12.8□□□□□ -0.36
Snrnp40Q6PE01 Hap1-201ENSMUST00000103124 2120 ntAPPRIS P3 TSL 1 (best) BASIC12.8□□□□□ -0.36
Snrnp40Q6PE01 4930473A02Rik-202ENSMUST00000136793 1409 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Snrnp40Q6PE01 Nov-201ENSMUST00000050027 2869 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Snrnp40Q6PE01 Zfp668-201ENSMUST00000054415 5768 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Snrnp40Q6PE01 Ptpn6-210ENSMUST00000174265 1743 ntTSL 5 BASIC12.8□□□□□ -0.36
Snrnp40Q6PE01 Plin5-201ENSMUST00000019808 1986 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Snrnp40Q6PE01 Mxra8-201ENSMUST00000030947 2203 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Snrnp40Q6PE01 Gm21981-201ENSMUST00000143789 2721 ntAPPRIS P1 TSL 5 BASIC12.8□□□□□ -0.36
Snrnp40Q6PE01 Map3k14-201ENSMUST00000021324 4246 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Snrnp40Q6PE01 Gm15559-201ENSMUST00000132267 2260 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Snrnp40Q6PE01 Unc50-202ENSMUST00000114925 1094 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Snrnp40Q6PE01 Gm15460-201ENSMUST00000118147 391 ntBASIC12.8□□□□□ -0.36
Snrnp40Q6PE01 Gm11425-201ENSMUST00000119608 498 ntBASIC12.8□□□□□ -0.36
Snrnp40Q6PE01 Rpl12-203ENSMUST00000126610 1242 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Snrnp40Q6PE01 Rab10os-207ENSMUST00000179924 823 ntTSL 5 BASIC12.8□□□□□ -0.36
Snrnp40Q6PE01 Gm5354-201ENSMUST00000182417 973 ntBASIC12.8□□□□□ -0.36
Snrnp40Q6PE01 Gm27701-201ENSMUST00000184498 110 ntBASIC12.8□□□□□ -0.36
Snrnp40Q6PE01 Gm28198-201ENSMUST00000190938 471 ntTSL 3 BASIC12.8□□□□□ -0.36
Snrnp40Q6PE01 Zfp936-202ENSMUST00000200973 578 ntTSL 3 BASIC12.8□□□□□ -0.36
Snrnp40Q6PE01 AC162801.1-201ENSMUST00000220612 198 ntBASIC12.8□□□□□ -0.36
Snrnp40Q6PE01 Ndufa4l2-201ENSMUST00000035735 934 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Snrnp40Q6PE01 Rnase2b-201ENSMUST00000075648 759 ntAPPRIS P1 BASIC12.8□□□□□ -0.36
Snrnp40Q6PE01 Gm9396-201ENSMUST00000076703 567 ntBASIC12.8□□□□□ -0.36
Snrnp40Q6PE01 Itga5-201ENSMUST00000023128 4382 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Snrnp40Q6PE01 Rad18-202ENSMUST00000077088 2577 ntAPPRIS P3 TSL 1 (best) BASIC12.8□□□□□ -0.36
Snrnp40Q6PE01 Tmem229b-201ENSMUST00000056660 3860 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Snrnp40Q6PE01 Fam184a-201ENSMUST00000020003 4164 ntAPPRIS P1 TSL 5 BASIC12.8□□□□□ -0.36
Snrnp40Q6PE01 Mbp-206ENSMUST00000102812 2108 ntAPPRIS ALT2 TSL 2 BASIC12.8□□□□□ -0.36
Snrnp40Q6PE01 Sec24a-202ENSMUST00000064297 2104 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Snrnp40Q6PE01 Cyp27a1-201ENSMUST00000027356 1892 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Snrnp40Q6PE01 Crtc3-201ENSMUST00000122255 5115 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Retrieved 100 of 76,532 protein–RNA pairs in 39.9 ms