Protein–RNA interactions for Protein: Q6PDQ2

Chd4, Chromodomain-helicase-DNA-binding protein 4, mousemouse

Known RBP Predictions only

Length 1,915 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chd4Q6PDQ2 Cdadc1-204ENSMUST00000171683 1892 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
Chd4Q6PDQ2 AC121801.1-201ENSMUST00000225363 1899 ntBASIC18.81■□□□□ 0.6
Chd4Q6PDQ2 Hoxc10-201ENSMUST00000001699 1909 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Chd4Q6PDQ2 Trav13d-2-201ENSMUST00000103596 264 ntAPPRIS P1 BASIC18.81■□□□□ 0.6
Chd4Q6PDQ2 Trav13n-2-201ENSMUST00000103622 264 ntAPPRIS P1 BASIC18.81■□□□□ 0.6
Chd4Q6PDQ2 Tex22-203ENSMUST00000146107 1130 ntAPPRIS P1 TSL 2 BASIC18.81■□□□□ 0.6
Chd4Q6PDQ2 Mtmr2-209ENSMUST00000156801 617 ntTSL 5 BASIC18.81■□□□□ 0.6
Chd4Q6PDQ2 Dhrs2-202ENSMUST00000165432 849 ntAPPRIS P1 TSL 5 BASIC18.81■□□□□ 0.6
Chd4Q6PDQ2 Gm27892-201ENSMUST00000185017 106 ntBASIC18.81■□□□□ 0.6
Chd4Q6PDQ2 Gm37667-201ENSMUST00000193103 752 ntTSL 5 BASIC18.81■□□□□ 0.6
Chd4Q6PDQ2 Sh3bgrl3-201ENSMUST00000030651 743 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Chd4Q6PDQ2 Crybb2-201ENSMUST00000031295 724 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Chd4Q6PDQ2 Dnaja3-201ENSMUST00000060067 2648 ntAPPRIS P3 TSL 1 (best) BASIC18.81■□□□□ 0.6
Chd4Q6PDQ2 Pid1-204ENSMUST00000176559 1564 ntTSL 2 BASIC18.81■□□□□ 0.6
Chd4Q6PDQ2 Large2-202ENSMUST00000090582 2291 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Chd4Q6PDQ2 Rab18-201ENSMUST00000097680 2257 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Chd4Q6PDQ2 Zfp879-203ENSMUST00000109134 2414 ntAPPRIS P1 TSL 5 BASIC18.81■□□□□ 0.6
Chd4Q6PDQ2 Lrig1-202ENSMUST00000101126 4951 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Chd4Q6PDQ2 Bdh1-202ENSMUST00000115226 1496 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Chd4Q6PDQ2 Abcb10-201ENSMUST00000075578 4306 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Chd4Q6PDQ2 Gdap1l1-201ENSMUST00000018087 2220 ntAPPRIS P2 TSL 1 (best) BASIC18.81■□□□□ 0.6
Chd4Q6PDQ2 Arhgap23-203ENSMUST00000121799 5816 ntAPPRIS P1 TSL 5 BASIC18.81■□□□□ 0.6
Chd4Q6PDQ2 Cpeb3-208ENSMUST00000132580 3148 ntAPPRIS P3 TSL 1 (best) BASIC18.81■□□□□ 0.6
Chd4Q6PDQ2 Ces2f-201ENSMUST00000076384 1823 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Chd4Q6PDQ2 Apol7a-201ENSMUST00000010745 1431 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Chd4Q6PDQ2 Gm13689-201ENSMUST00000119360 685 ntBASIC18.8■□□□□ 0.6
Chd4Q6PDQ2 Lrch4-202ENSMUST00000175968 2036 ntAPPRIS ALT2 TSL 5 BASIC18.8■□□□□ 0.6
Chd4Q6PDQ2 Gm9002-201ENSMUST00000178437 499 ntBASIC18.8■□□□□ 0.6
Chd4Q6PDQ2 Krt2-201ENSMUST00000023712 2613 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Chd4Q6PDQ2 Adal-201ENSMUST00000028702 2471 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Chd4Q6PDQ2 Ttll3-202ENSMUST00000038889 3114 ntAPPRIS ALT2 TSL 5 BASIC18.8■□□□□ 0.6
Chd4Q6PDQ2 Bhlhb9-201ENSMUST00000068755 2823 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Chd4Q6PDQ2 Shroom1-204ENSMUST00000109013 3312 ntAPPRIS P3 TSL 1 (best) BASIC18.8■□□□□ 0.6
Chd4Q6PDQ2 Tpm3-202ENSMUST00000118566 2190 ntTSL 5 BASIC18.8■□□□□ 0.6
Chd4Q6PDQ2 Sprn-201ENSMUST00000059241 3374 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Chd4Q6PDQ2 Enah-205ENSMUST00000177811 4231 ntAPPRIS ALT2 TSL 5 BASIC18.8■□□□□ 0.6
Chd4Q6PDQ2 Nmi-202ENSMUST00000112705 1130 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Chd4Q6PDQ2 Gm12390-201ENSMUST00000117897 397 ntBASIC18.8■□□□□ 0.6
Chd4Q6PDQ2 Otx2os1-202ENSMUST00000183803 743 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Chd4Q6PDQ2 Mrpl30-205ENSMUST00000193673 662 ntAPPRIS P1 TSL 2 BASIC18.8■□□□□ 0.6
Chd4Q6PDQ2 Gp9-201ENSMUST00000032133 881 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Chd4Q6PDQ2 Mrps17-201ENSMUST00000042191 832 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Chd4Q6PDQ2 Fubp1-205ENSMUST00000196695 2374 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
Chd4Q6PDQ2 Gm14451-201ENSMUST00000121581 1542 ntBASIC18.79■□□□□ 0.6
Chd4Q6PDQ2 Mturn-203ENSMUST00000190641 5303 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Chd4Q6PDQ2 R3hcc1-202ENSMUST00000121142 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
Chd4Q6PDQ2 Sytl1-201ENSMUST00000030674 1951 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Chd4Q6PDQ2 Ppm1h-206ENSMUST00000161487 2931 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Chd4Q6PDQ2 Phospho2-202ENSMUST00000112266 2194 ntAPPRIS P1 TSL 3 BASIC18.79■□□□□ 0.6
Chd4Q6PDQ2 Klhl11-201ENSMUST00000056665 2393 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Chd4Q6PDQ2 AC159196.2-201ENSMUST00000224082 1622 ntBASIC18.79■□□□□ 0.6
Chd4Q6PDQ2 Pdpn-201ENSMUST00000030317 1817 ntAPPRIS P3 TSL 1 (best) BASIC18.79■□□□□ 0.6
Chd4Q6PDQ2 Ttc9-202ENSMUST00000218362 4754 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Chd4Q6PDQ2 Mir692-1-201ENSMUST00000102263 109 ntBASIC18.79■□□□□ 0.6
Chd4Q6PDQ2 Gm15755-201ENSMUST00000133698 659 ntTSL 3 BASIC18.79■□□□□ 0.6
Chd4Q6PDQ2 Gm18307-201ENSMUST00000206864 949 ntBASIC18.79■□□□□ 0.6
Chd4Q6PDQ2 Gm7446-201ENSMUST00000221035 1240 ntBASIC18.79■□□□□ 0.6
Chd4Q6PDQ2 Mecp2-203ENSMUST00000123362 1675 ntTSL 5 BASIC18.79■□□□□ 0.6
Chd4Q6PDQ2 Narfl-204ENSMUST00000134108 2062 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Chd4Q6PDQ2 Kcng1-201ENSMUST00000099069 2316 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Chd4Q6PDQ2 Grhl2-203ENSMUST00000161405 1996 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Chd4Q6PDQ2 Tnip2-202ENSMUST00000087737 1987 ntAPPRIS P2 TSL 1 (best) BASIC18.79■□□□□ 0.6
Chd4Q6PDQ2 Nfe2-207ENSMUST00000134554 1761 ntAPPRIS P1 TSL 2 BASIC18.79■□□□□ 0.6
Chd4Q6PDQ2 Arpp19-201ENSMUST00000007800 4046 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Chd4Q6PDQ2 Rnf180-203ENSMUST00000224662 2734 ntAPPRIS ALT2 BASIC18.79■□□□□ 0.6
Chd4Q6PDQ2 Efnb3-201ENSMUST00000004036 3183 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Chd4Q6PDQ2 Rxra-201ENSMUST00000077257 4905 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Chd4Q6PDQ2 0610005C13Rik-207ENSMUST00000210866 2434 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Chd4Q6PDQ2 Trav4-2-201ENSMUST00000103637 370 ntAPPRIS P1 BASIC18.78■□□□□ 0.6
Chd4Q6PDQ2 Gm15945-201ENSMUST00000146755 810 ntTSL 3 BASIC18.78■□□□□ 0.6
Chd4Q6PDQ2 Gm42921-201ENSMUST00000196670 655 ntTSL 2 BASIC18.78■□□□□ 0.6
Chd4Q6PDQ2 Med10-201ENSMUST00000022089 913 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Chd4Q6PDQ2 Ptx4-201ENSMUST00000054930 1582 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Chd4Q6PDQ2 Pdia3-201ENSMUST00000028683 2770 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Chd4Q6PDQ2 Slc27a1-201ENSMUST00000034267 2795 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Chd4Q6PDQ2 Dsn1-202ENSMUST00000103130 2636 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Chd4Q6PDQ2 Pik3ap1-201ENSMUST00000059672 2615 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Chd4Q6PDQ2 Slc22a18-201ENSMUST00000052348 1525 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Chd4Q6PDQ2 Rpsa-ps9-201ENSMUST00000120702 885 ntBASIC18.78■□□□□ 0.6
Chd4Q6PDQ2 C430049B03Rik-201ENSMUST00000129764 868 ntTSL 3 BASIC18.78■□□□□ 0.6
Chd4Q6PDQ2 4930412M03Rik-201ENSMUST00000130746 1111 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Chd4Q6PDQ2 Ucma-204ENSMUST00000167607 785 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Chd4Q6PDQ2 Gm18905-201ENSMUST00000205454 928 ntBASIC18.78■□□□□ 0.6
Chd4Q6PDQ2 4930438A08Rik-202ENSMUST00000208022 918 ntTSL 5 BASIC18.78■□□□□ 0.6
Chd4Q6PDQ2 Ndufs6-201ENSMUST00000022097 568 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Chd4Q6PDQ2 AC192088.1-201ENSMUST00000227561 301 ntBASIC18.78■□□□□ 0.6
Chd4Q6PDQ2 Ddx20-201ENSMUST00000090680 2905 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Chd4Q6PDQ2 Gm2762-202ENSMUST00000201517 2339 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
Chd4Q6PDQ2 Gm29358-201ENSMUST00000186510 1734 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
Chd4Q6PDQ2 Phf23-209ENSMUST00000153684 1797 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
Chd4Q6PDQ2 Fbxw17-201ENSMUST00000046974 1798 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Chd4Q6PDQ2 Chst4-202ENSMUST00000211894 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
Chd4Q6PDQ2 Lrrc56-201ENSMUST00000047093 2197 ntAPPRIS P3 TSL 1 (best) BASIC18.77■□□□□ 0.6
Chd4Q6PDQ2 Retreg1-202ENSMUST00000110438 1526 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Chd4Q6PDQ2 Kir3dl1-202ENSMUST00000113105 1544 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Chd4Q6PDQ2 Men1-207ENSMUST00000113503 1851 ntAPPRIS ALT2 TSL 5 BASIC18.77■□□□□ 0.6
Chd4Q6PDQ2 Casp8-201ENSMUST00000027189 2585 ntAPPRIS P3 TSL 1 (best) BASIC18.77■□□□□ 0.6
Chd4Q6PDQ2 Epha1-203ENSMUST00000204357 2948 ntTSL 5 BASIC18.77■□□□□ 0.6
Chd4Q6PDQ2 Card10-202ENSMUST00000164826 4726 ntAPPRIS P2 TSL 1 (best) BASIC18.77■□□□□ 0.6
Chd4Q6PDQ2 Hus1b-201ENSMUST00000102943 1187 ntAPPRIS P1 BASIC18.77■□□□□ 0.6
Retrieved 100 of 76,532 protein–RNA pairs in 44.6 ms