Protein–RNA interactions for Protein: Q6PDG5

Smarcc2, SWI/SNF complex subunit SMARCC2, mousemouse

Predictions only

Length 1,213 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smarcc2Q6PDG5 Lce1f-201ENSMUST00000047153 728 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Smarcc2Q6PDG5 Rph3al-202ENSMUST00000066504 988 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Smarcc2Q6PDG5 Thap12-201ENSMUST00000033009 3723 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Smarcc2Q6PDG5 Fndc3a-201ENSMUST00000089017 6143 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Smarcc2Q6PDG5 Nr3c2-204ENSMUST00000109913 5916 ntAPPRIS P2 TSL 5 BASIC17.08■□□□□ 0.32
Smarcc2Q6PDG5 Sik1-201ENSMUST00000024839 4511 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Smarcc2Q6PDG5 Cox16-201ENSMUST00000002757 2007 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Smarcc2Q6PDG5 Tmem184a-201ENSMUST00000044002 2039 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.32
Smarcc2Q6PDG5 Psmd12-201ENSMUST00000021063 1904 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Smarcc2Q6PDG5 Fars2-208ENSMUST00000224611 1750 ntAPPRIS P1 BASIC17.07■□□□□ 0.32
Smarcc2Q6PDG5 AI606473-201ENSMUST00000177201 1731 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Smarcc2Q6PDG5 Alox5-201ENSMUST00000026795 2821 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Smarcc2Q6PDG5 Slc27a5-202ENSMUST00000120903 1468 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Smarcc2Q6PDG5 Gm2109-201ENSMUST00000189326 1409 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Smarcc2Q6PDG5 L2hgdh-201ENSMUST00000021370 3340 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Smarcc2Q6PDG5 Ccdc42-203ENSMUST00000154294 1384 ntAPPRIS P1 TSL 5 BASIC17.07■□□□□ 0.32
Smarcc2Q6PDG5 Ispd-202ENSMUST00000220519 3122 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Smarcc2Q6PDG5 Pdk2-201ENSMUST00000038431 2246 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Smarcc2Q6PDG5 Tbc1d1-203ENSMUST00000119756 4760 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
Smarcc2Q6PDG5 Paxx-201ENSMUST00000114261 981 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Smarcc2Q6PDG5 Pfn2-203ENSMUST00000120289 905 ntTSL 2 BASIC17.07■□□□□ 0.32
Smarcc2Q6PDG5 Gm11025-201ENSMUST00000140773 466 ntBASIC17.07■□□□□ 0.32
Smarcc2Q6PDG5 Ighv1-15-201ENSMUST00000192077 351 ntAPPRIS P1 BASIC17.07■□□□□ 0.32
Smarcc2Q6PDG5 Gm29909-201ENSMUST00000214500 922 ntTSL 5 BASIC17.07■□□□□ 0.32
Smarcc2Q6PDG5 Prss29-201ENSMUST00000024993 1178 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Smarcc2Q6PDG5 Epc1-202ENSMUST00000050542 565 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Smarcc2Q6PDG5 C1qtnf2-201ENSMUST00000057679 1211 ntAPPRIS P2 TSL 1 (best) BASIC17.07■□□□□ 0.32
Smarcc2Q6PDG5 Medag-201ENSMUST00000093110 2953 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Smarcc2Q6PDG5 Ggh-201ENSMUST00000098242 1965 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Smarcc2Q6PDG5 Rimkla-201ENSMUST00000049994 4097 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Smarcc2Q6PDG5 A430034D21Rik-201ENSMUST00000194339 1802 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Smarcc2Q6PDG5 Sesn3-201ENSMUST00000034507 1827 ntTSL 5 BASIC17.07■□□□□ 0.32
Smarcc2Q6PDG5 Mpped1-201ENSMUST00000046168 3265 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Smarcc2Q6PDG5 Uck2-202ENSMUST00000053686 4731 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Smarcc2Q6PDG5 Cdk8-205ENSMUST00000161181 2467 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Smarcc2Q6PDG5 Zfp707-202ENSMUST00000109967 1703 ntAPPRIS P3 TSL 1 (best) BASIC17.07■□□□□ 0.32
Smarcc2Q6PDG5 Uvrag-201ENSMUST00000037968 5157 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Smarcc2Q6PDG5 Msx3-201ENSMUST00000055353 2356 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Smarcc2Q6PDG5 Gm4756-202ENSMUST00000208039 2344 ntAPPRIS P1 TSL 5 BASIC17.07■□□□□ 0.32
Smarcc2Q6PDG5 Ap1s2-202ENSMUST00000069041 2226 ntAPPRIS P4 TSL 1 (best) BASIC17.06■□□□□ 0.32
Smarcc2Q6PDG5 Iffo1-201ENSMUST00000117675 2833 ntAPPRIS P4 TSL 1 (best) BASIC17.06■□□□□ 0.32
Smarcc2Q6PDG5 Cadps2-206ENSMUST00000115361 4571 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
Smarcc2Q6PDG5 Rnf180-203ENSMUST00000224662 2734 ntAPPRIS ALT2 BASIC17.06■□□□□ 0.32
Smarcc2Q6PDG5 Asb2-201ENSMUST00000021617 2690 ntAPPRIS P2 TSL 1 (best) BASIC17.06■□□□□ 0.32
Smarcc2Q6PDG5 Lgi3-201ENSMUST00000047331 3174 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Smarcc2Q6PDG5 Gm14221-202ENSMUST00000209603 1437 ntTSL 5 BASIC17.06■□□□□ 0.32
Smarcc2Q6PDG5 Afg3l2-201ENSMUST00000025408 3085 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Smarcc2Q6PDG5 Ralgds-201ENSMUST00000028170 3590 ntAPPRIS P3 TSL 1 (best) BASIC17.06■□□□□ 0.32
Smarcc2Q6PDG5 Arap3-201ENSMUST00000042944 5224 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Smarcc2Q6PDG5 Teddm2-202ENSMUST00000123490 1851 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
Smarcc2Q6PDG5 A530083I20Rik-203ENSMUST00000214426 1855 ntTSL 5 BASIC17.06■□□□□ 0.32
Smarcc2Q6PDG5 Tubb3-201ENSMUST00000071134 1868 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Smarcc2Q6PDG5 P2rx3-203ENSMUST00000111616 1315 ntTSL 5 BASIC17.06■□□□□ 0.32
Smarcc2Q6PDG5 Mpc1-205ENSMUST00000142594 961 ntTSL 5 BASIC17.06■□□□□ 0.32
Smarcc2Q6PDG5 A530058N18Rik-205ENSMUST00000143993 550 ntTSL 3 BASIC17.06■□□□□ 0.32
Smarcc2Q6PDG5 Gm26308-201ENSMUST00000157768 69 ntBASIC17.06■□□□□ 0.32
Smarcc2Q6PDG5 Gm20509-201ENSMUST00000174203 1016 ntAPPRIS P1 TSL 5 BASIC17.06■□□□□ 0.32
Smarcc2Q6PDG5 Znrf1-213ENSMUST00000174333 515 ntTSL 3 BASIC17.06■□□□□ 0.32
Smarcc2Q6PDG5 Gm9726-201ENSMUST00000180321 678 ntBASIC17.06■□□□□ 0.32
Smarcc2Q6PDG5 Gm4691-201ENSMUST00000182339 1000 ntBASIC17.06■□□□□ 0.32
Smarcc2Q6PDG5 Gm27494-201ENSMUST00000184735 189 ntBASIC17.06■□□□□ 0.32
Smarcc2Q6PDG5 4930500L23Rik-201ENSMUST00000198000 747 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Smarcc2Q6PDG5 Gm2451-201ENSMUST00000199447 999 ntBASIC17.06■□□□□ 0.32
Smarcc2Q6PDG5 Gm10290-201ENSMUST00000200451 999 ntBASIC17.06■□□□□ 0.32
Smarcc2Q6PDG5 9430081H08Rik-201ENSMUST00000217460 818 ntBASIC17.06■□□□□ 0.32
Smarcc2Q6PDG5 AC155252.2-201ENSMUST00000226946 680 ntBASIC17.06■□□□□ 0.32
Smarcc2Q6PDG5 Nutf2-201ENSMUST00000008594 948 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Smarcc2Q6PDG5 Foxa1-201ENSMUST00000044380 3191 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Smarcc2Q6PDG5 Patz1-201ENSMUST00000057089 3118 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Smarcc2Q6PDG5 Fam170b-201ENSMUST00000104926 1694 ntAPPRIS P1 TSL 2 BASIC17.06■□□□□ 0.32
Smarcc2Q6PDG5 Anks1b-213ENSMUST00000182284 2607 ntTSL 5 BASIC17.06■□□□□ 0.32
Smarcc2Q6PDG5 Zfp334-201ENSMUST00000103084 8205 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Smarcc2Q6PDG5 Kdm4b-202ENSMUST00000086835 4360 ntAPPRIS ALT2 TSL 5 BASIC17.06■□□□□ 0.32
Smarcc2Q6PDG5 Senp6-202ENSMUST00000164859 3853 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
Smarcc2Q6PDG5 Ube2o-201ENSMUST00000082152 5205 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Smarcc2Q6PDG5 Arhgap40-203ENSMUST00000165398 2028 ntAPPRIS P1 TSL 5 BASIC17.06■□□□□ 0.32
Smarcc2Q6PDG5 Lrp11-201ENSMUST00000019931 3386 ntAPPRIS P2 TSL 1 (best) BASIC17.06■□□□□ 0.32
Smarcc2Q6PDG5 Gm8096-201ENSMUST00000209921 1591 ntBASIC17.06■□□□□ 0.32
Smarcc2Q6PDG5 Cdh11-201ENSMUST00000075190 5647 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Smarcc2Q6PDG5 Gm43205-201ENSMUST00000198622 1968 ntBASIC17.06■□□□□ 0.32
Smarcc2Q6PDG5 4921513I03Rik-201ENSMUST00000056994 1534 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Smarcc2Q6PDG5 Syk-203ENSMUST00000120135 5363 ntAPPRIS P2 TSL 1 (best) BASIC17.06■□□□□ 0.32
Smarcc2Q6PDG5 Bahd1-201ENSMUST00000036578 4594 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Smarcc2Q6PDG5 Sema3b-204ENSMUST00000102531 2958 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Smarcc2Q6PDG5 Clec2h-201ENSMUST00000032518 2160 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Smarcc2Q6PDG5 4921514A10Rik-201ENSMUST00000181450 2114 ntTSL 5 BASIC17.05■□□□□ 0.32
Smarcc2Q6PDG5 Fzd6-202ENSMUST00000179165 4325 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Smarcc2Q6PDG5 Usp31-201ENSMUST00000046929 10198 ntAPPRIS P1 TSL 5 BASIC17.05■□□□□ 0.32
Smarcc2Q6PDG5 Lrch4-202ENSMUST00000175968 2036 ntAPPRIS ALT2 TSL 5 BASIC17.05■□□□□ 0.32
Smarcc2Q6PDG5 Bad-203ENSMUST00000113426 740 ntTSL 5 BASIC17.05■□□□□ 0.32
Smarcc2Q6PDG5 Mir1895-201ENSMUST00000122615 79 ntBASIC17.05■□□□□ 0.32
Smarcc2Q6PDG5 Gssos1-201ENSMUST00000142509 716 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Smarcc2Q6PDG5 Irs3-202ENSMUST00000196511 1281 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
Smarcc2Q6PDG5 Olfr286-202ENSMUST00000205305 969 ntBASIC17.05■□□□□ 0.32
Smarcc2Q6PDG5 Gm9945-201ENSMUST00000067523 932 ntAPPRIS P1 BASIC17.05■□□□□ 0.32
Smarcc2Q6PDG5 Usp53-201ENSMUST00000090379 6185 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Smarcc2Q6PDG5 Kcnh1-201ENSMUST00000078470 7242 ntAPPRIS P3 TSL 1 (best) BASIC17.05■□□□□ 0.32
Smarcc2Q6PDG5 Jakmip1-212ENSMUST00000174629 1941 ntTSL 5 BASIC17.05■□□□□ 0.32
Smarcc2Q6PDG5 Gm10457-201ENSMUST00000222619 1906 ntTSL 2 BASIC17.05■□□□□ 0.32
Smarcc2Q6PDG5 Prkcz-201ENSMUST00000030922 2641 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Retrieved 100 of 76,532 protein–RNA pairs in 44.9 ms