Protein–RNA interactions for Protein: Q6PCX9

Trim37, E3 ubiquitin-protein ligase TRIM37, mousemouse

Predictions only

Length 961 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim37Q6PCX9 Cradd-202ENSMUST00000217809 1115 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Trim37Q6PCX9 CT030684.1-201ENSMUST00000227292 914 ntBASIC16.27■□□□□ 0.2
Trim37Q6PCX9 AC155729.1-201ENSMUST00000227758 544 ntBASIC16.27■□□□□ 0.2
Trim37Q6PCX9 Mlf1-202ENSMUST00000077916 1114 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.2
Trim37Q6PCX9 Cd5l-201ENSMUST00000015998 2036 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Trim37Q6PCX9 Ebf3-208ENSMUST00000210774 2994 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
Trim37Q6PCX9 Rnd1-201ENSMUST00000003451 2203 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Trim37Q6PCX9 Traf5-201ENSMUST00000085573 1964 ntAPPRIS P1 TSL 5 BASIC16.27■□□□□ 0.19
Trim37Q6PCX9 Magi1-202ENSMUST00000089317 7209 ntAPPRIS P3 TSL 1 (best) BASIC16.27■□□□□ 0.19
Trim37Q6PCX9 Gm5357-201ENSMUST00000212720 1924 ntBASIC16.27■□□□□ 0.19
Trim37Q6PCX9 Ttc13-210ENSMUST00000214828 3301 ntAPPRIS P1 TSL 5 BASIC16.27■□□□□ 0.19
Trim37Q6PCX9 Esco1-203ENSMUST00000115864 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.19
Trim37Q6PCX9 Snx19-201ENSMUST00000164099 5762 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Trim37Q6PCX9 Mlec-201ENSMUST00000112121 5955 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Trim37Q6PCX9 Gfm2-211ENSMUST00000161913 1829 ntTSL 2 BASIC16.26■□□□□ 0.19
Trim37Q6PCX9 Foxg1-204ENSMUST00000179669 3973 ntAPPRIS P1 BASIC16.26■□□□□ 0.19
Trim37Q6PCX9 Syt7-204ENSMUST00000223586 1344 ntBASIC16.26■□□□□ 0.19
Trim37Q6PCX9 Alx4-201ENSMUST00000042078 5253 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Trim37Q6PCX9 Gss-201ENSMUST00000079691 1963 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Trim37Q6PCX9 Vav1-204ENSMUST00000169220 2810 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
Trim37Q6PCX9 Camsap1-202ENSMUST00000114167 7981 ntAPPRIS P2 TSL 5 BASIC16.26■□□□□ 0.19
Trim37Q6PCX9 Camsap1-201ENSMUST00000091268 7978 ntAPPRIS ALT2 TSL 5 BASIC16.26■□□□□ 0.19
Trim37Q6PCX9 Daxx-201ENSMUST00000079421 2580 ntAPPRIS P2 TSL 1 (best) BASIC16.26■□□□□ 0.19
Trim37Q6PCX9 Fdx1-202ENSMUST00000214013 2759 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Trim37Q6PCX9 Gm15487-201ENSMUST00000122373 465 ntBASIC16.26■□□□□ 0.19
Trim37Q6PCX9 Gm20509-201ENSMUST00000174203 1016 ntAPPRIS P1 TSL 5 BASIC16.26■□□□□ 0.19
Trim37Q6PCX9 5430405H02Rik-203ENSMUST00000185402 904 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Trim37Q6PCX9 Gm18062-201ENSMUST00000208020 547 ntBASIC16.26■□□□□ 0.19
Trim37Q6PCX9 Gm18055-201ENSMUST00000208254 547 ntBASIC16.26■□□□□ 0.19
Trim37Q6PCX9 Coprs-202ENSMUST00000209371 601 ntTSL 3 BASIC16.26■□□□□ 0.19
Trim37Q6PCX9 Ccdc182-201ENSMUST00000037268 1204 ntAPPRIS P1 BASIC16.26■□□□□ 0.19
Trim37Q6PCX9 Ddx49-201ENSMUST00000008004 2137 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Trim37Q6PCX9 Syne3-201ENSMUST00000067005 5097 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
Trim37Q6PCX9 BC037032-201ENSMUST00000140003 3974 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Trim37Q6PCX9 Zfp36-202ENSMUST00000209061 2465 ntAPPRIS ALT2 BASIC16.26■□□□□ 0.19
Trim37Q6PCX9 Zfp612-202ENSMUST00000212754 4863 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Trim37Q6PCX9 Nabp1-201ENSMUST00000027279 2838 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Trim37Q6PCX9 Mbtps2-201ENSMUST00000058098 4797 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Trim37Q6PCX9 Syt12-201ENSMUST00000059295 3581 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Trim37Q6PCX9 Zfp184-202ENSMUST00000102978 3198 ntAPPRIS P1 TSL 5 BASIC16.26■□□□□ 0.19
Trim37Q6PCX9 Rtn4-201ENSMUST00000060992 1773 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Trim37Q6PCX9 Rfx5-207ENSMUST00000137088 4333 ntAPPRIS P1 TSL 5 BASIC16.26■□□□□ 0.19
Trim37Q6PCX9 Rnf138-201ENSMUST00000052396 3110 ntAPPRIS P1 TSL 5 BASIC16.25■□□□□ 0.19
Trim37Q6PCX9 Steap2-205ENSMUST00000115427 3470 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
Trim37Q6PCX9 Grin1os-201ENSMUST00000129723 2891 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
Trim37Q6PCX9 Agfg1-201ENSMUST00000063380 2896 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
Trim37Q6PCX9 Stard5-201ENSMUST00000075418 2483 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Trim37Q6PCX9 Ppp4r4-201ENSMUST00000021631 3964 ntAPPRIS P2 TSL 1 (best) BASIC16.25■□□□□ 0.19
Trim37Q6PCX9 Supt5-208ENSMUST00000209141 3755 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Trim37Q6PCX9 Bsx-201ENSMUST00000067375 2960 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Trim37Q6PCX9 Abcb4-201ENSMUST00000003717 4079 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Trim37Q6PCX9 Shroom1-204ENSMUST00000109013 3312 ntAPPRIS P3 TSL 1 (best) BASIC16.25■□□□□ 0.19
Trim37Q6PCX9 Gm5934-201ENSMUST00000120734 2588 ntAPPRIS P1 TSL 5 BASIC16.25■□□□□ 0.19
Trim37Q6PCX9 Casp8-201ENSMUST00000027189 2585 ntAPPRIS P3 TSL 1 (best) BASIC16.25■□□□□ 0.19
Trim37Q6PCX9 Coro1c-201ENSMUST00000004646 3491 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Trim37Q6PCX9 H60b-201ENSMUST00000105522 1029 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Trim37Q6PCX9 Kctd10-201ENSMUST00000001125 1026 ntAPPRIS ALT1 TSL 5 BASIC16.25■□□□□ 0.19
Trim37Q6PCX9 Gm11478-201ENSMUST00000117851 599 ntBASIC16.25■□□□□ 0.19
Trim37Q6PCX9 Mrpl40-202ENSMUST00000119273 778 ntTSL 3 BASIC16.25■□□□□ 0.19
Trim37Q6PCX9 Gm29501-201ENSMUST00000186133 530 ntTSL 5 BASIC16.25■□□□□ 0.19
Trim37Q6PCX9 AC154239.3-201ENSMUST00000226933 674 ntBASIC16.25■□□□□ 0.19
Trim37Q6PCX9 Rpl13a-ps1-201ENSMUST00000071866 612 ntAPPRIS P1 BASIC16.25■□□□□ 0.19
Trim37Q6PCX9 Ap2s1-201ENSMUST00000086112 836 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Trim37Q6PCX9 Agbl5-202ENSMUST00000114700 3296 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
Trim37Q6PCX9 Parp16-205ENSMUST00000216702 1643 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Trim37Q6PCX9 Rxrg-203ENSMUST00000111384 1967 ntAPPRIS P1 TSL 5 BASIC16.25■□□□□ 0.19
Trim37Q6PCX9 Gm10676-201ENSMUST00000098778 3221 ntBASIC16.25■□□□□ 0.19
Trim37Q6PCX9 Hsp90b1-201ENSMUST00000020238 2825 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Trim37Q6PCX9 Reep4-201ENSMUST00000047218 1565 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Trim37Q6PCX9 Knop1-205ENSMUST00000116280 5382 ntAPPRIS P3 TSL 5 BASIC16.25■□□□□ 0.19
Trim37Q6PCX9 Synrg-201ENSMUST00000049714 3995 ntAPPRIS ALT2 TSL 5 BASIC16.25■□□□□ 0.19
Trim37Q6PCX9 Tmem116-204ENSMUST00000111795 2221 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
Trim37Q6PCX9 Card9-201ENSMUST00000028294 1880 ntAPPRIS P1 TSL 5 BASIC16.25■□□□□ 0.19
Trim37Q6PCX9 Acat2-203ENSMUST00000159697 1800 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
Trim37Q6PCX9 Hykk-201ENSMUST00000039742 5110 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Trim37Q6PCX9 Klhl26-204ENSMUST00000209567 2615 ntTSL 3 BASIC16.24■□□□□ 0.19
Trim37Q6PCX9 Dclk1-211ENSMUST00000199169 1499 ntTSL 2 BASIC16.24■□□□□ 0.19
Trim37Q6PCX9 Gm3365-201ENSMUST00000216296 1480 ntBASIC16.24■□□□□ 0.19
Trim37Q6PCX9 Cep55-203ENSMUST00000169673 2761 ntAPPRIS ALT2 TSL 1 (best) BASIC16.24■□□□□ 0.19
Trim37Q6PCX9 Efr3b-201ENSMUST00000111178 6547 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Trim37Q6PCX9 Fastk-203ENSMUST00000115043 3056 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
Trim37Q6PCX9 Snrnp27-202ENSMUST00000113683 1005 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
Trim37Q6PCX9 Gm16194-204ENSMUST00000141797 475 ntTSL 3 BASIC16.24■□□□□ 0.19
Trim37Q6PCX9 Gm833-201ENSMUST00000143133 884 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
Trim37Q6PCX9 1700108N11Rik-201ENSMUST00000153051 917 ntTSL 2 BASIC16.24■□□□□ 0.19
Trim37Q6PCX9 Gm9824-201ENSMUST00000178707 561 ntBASIC16.24■□□□□ 0.19
Trim37Q6PCX9 Gm7286-201ENSMUST00000182691 1007 ntBASIC16.24■□□□□ 0.19
Trim37Q6PCX9 Gm31728-201ENSMUST00000192164 435 ntTSL 3 BASIC16.24■□□□□ 0.19
Trim37Q6PCX9 Gm37596-201ENSMUST00000193565 1021 ntAPPRIS P1 BASIC16.24■□□□□ 0.19
Trim37Q6PCX9 Gm43397-201ENSMUST00000196422 481 ntTSL 3 BASIC16.24■□□□□ 0.19
Trim37Q6PCX9 Gm6745-201ENSMUST00000199216 526 ntBASIC16.24■□□□□ 0.19
Trim37Q6PCX9 Gm44719-201ENSMUST00000206404 149 ntBASIC16.24■□□□□ 0.19
Trim37Q6PCX9 Tspan32-211ENSMUST00000207211 1220 ntTSL 5 BASIC16.24■□□□□ 0.19
Trim37Q6PCX9 5830408C22Rik-201ENSMUST00000210072 1115 ntTSL 5 BASIC16.24■□□□□ 0.19
Trim37Q6PCX9 AC166341.4-201ENSMUST00000220625 123 ntBASIC16.24■□□□□ 0.19
Trim37Q6PCX9 Ndufs6-204ENSMUST00000223293 757 ntTSL 2 BASIC16.24■□□□□ 0.19
Trim37Q6PCX9 AC132863.2-201ENSMUST00000226643 799 ntBASIC16.24■□□□□ 0.19
Trim37Q6PCX9 Kmt5b-208ENSMUST00000113977 6002 ntAPPRIS P3 TSL 5 BASIC16.24■□□□□ 0.19
Trim37Q6PCX9 Cpeb3-212ENSMUST00000154376 5671 ntAPPRIS P3 TSL 1 (best) BASIC16.24■□□□□ 0.19
Trim37Q6PCX9 Lrp4-201ENSMUST00000028689 7926 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Retrieved 100 of 76,532 protein–RNA pairs in 29.6 ms