Protein–RNA interactions for Protein: Q6P9Z1

Smarcd3, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D member 3, mousemouse

Predictions only

Length 483 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smarcd3Q6P9Z1 Spg20-204ENSMUST00000118118 3981 ntAPPRIS P3 TSL 1 (best) BASIC13.45□□□□□ -0.26
Smarcd3Q6P9Z1 Cep170b-204ENSMUST00000220627 5395 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
Smarcd3Q6P9Z1 Tmem131l-202ENSMUST00000191758 5555 ntAPPRIS P2 TSL 1 (best) BASIC13.45□□□□□ -0.26
Smarcd3Q6P9Z1 Pcsk4-201ENSMUST00000020340 2539 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Smarcd3Q6P9Z1 Pank4-201ENSMUST00000030931 2508 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Smarcd3Q6P9Z1 Midn-201ENSMUST00000042057 3727 ntAPPRIS P3 TSL 1 (best) BASIC13.45□□□□□ -0.26
Smarcd3Q6P9Z1 Ttyh2-201ENSMUST00000045779 3486 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Smarcd3Q6P9Z1 Rasgrp2-205ENSMUST00000113471 535 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
Smarcd3Q6P9Z1 Speg-202ENSMUST00000113587 1254 ntTSL 5 BASIC13.45□□□□□ -0.26
Smarcd3Q6P9Z1 Pgam1-ps2-201ENSMUST00000117129 765 ntBASIC13.45□□□□□ -0.26
Smarcd3Q6P9Z1 Cdpf1-203ENSMUST00000134631 786 ntAPPRIS P1 TSL 5 BASIC13.45□□□□□ -0.26
Smarcd3Q6P9Z1 Platr15-201ENSMUST00000147128 768 ntTSL 5 BASIC13.45□□□□□ -0.26
Smarcd3Q6P9Z1 Tmem9-205ENSMUST00000165125 901 ntAPPRIS P1 TSL 3 BASIC13.45□□□□□ -0.26
Smarcd3Q6P9Z1 Tbc1d7-202ENSMUST00000179852 1246 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Smarcd3Q6P9Z1 Gm44202-201ENSMUST00000203549 532 ntTSL 3 BASIC13.45□□□□□ -0.26
Smarcd3Q6P9Z1 Ndufb9-201ENSMUST00000022980 704 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Smarcd3Q6P9Z1 Pdcd2l-201ENSMUST00000002710 1295 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Smarcd3Q6P9Z1 Atp6v0c-202ENSMUST00000098862 796 ntAPPRIS P1 TSL 2 BASIC13.45□□□□□ -0.26
Smarcd3Q6P9Z1 Rnf144a-201ENSMUST00000020971 5164 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Smarcd3Q6P9Z1 Phyhip-201ENSMUST00000003561 2838 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Smarcd3Q6P9Z1 Ltbp4-203ENSMUST00000118583 4726 ntAPPRIS ALT2 TSL 1 (best) BASIC13.45□□□□□ -0.26
Smarcd3Q6P9Z1 Tc2n-203ENSMUST00000160830 2005 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Smarcd3Q6P9Z1 Lrriq4-202ENSMUST00000108267 2387 ntAPPRIS P3 TSL 1 (best) BASIC13.45□□□□□ -0.26
Smarcd3Q6P9Z1 Heg1-201ENSMUST00000126532 6714 ntAPPRIS P5 TSL 5 BASIC13.45□□□□□ -0.26
Smarcd3Q6P9Z1 Unc93b1-204ENSMUST00000165711 1991 ntAPPRIS ALT2 TSL 5 BASIC13.45□□□□□ -0.26
Smarcd3Q6P9Z1 Ppp2r5b-201ENSMUST00000025695 2742 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Smarcd3Q6P9Z1 Hsph1-211ENSMUST00000202361 3802 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Smarcd3Q6P9Z1 Rbbp8-201ENSMUST00000047322 3618 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Smarcd3Q6P9Z1 Serinc1-201ENSMUST00000020027 2880 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Smarcd3Q6P9Z1 Hif1a-201ENSMUST00000021530 4724 ntAPPRIS P3 TSL 1 (best) BASIC13.45□□□□□ -0.26
Smarcd3Q6P9Z1 Brix1-201ENSMUST00000022855 2664 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Smarcd3Q6P9Z1 P2rx6-203ENSMUST00000171002 1353 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
Smarcd3Q6P9Z1 Gm18856-201ENSMUST00000178096 1374 ntBASIC13.45□□□□□ -0.26
Smarcd3Q6P9Z1 Amn1-201ENSMUST00000095319 1369 ntAPPRIS ALT2 TSL 1 (best) BASIC13.45□□□□□ -0.26
Smarcd3Q6P9Z1 Otud4-203ENSMUST00000173286 7213 ntAPPRIS ALT2 TSL 1 (best) BASIC13.45□□□□□ -0.26
Smarcd3Q6P9Z1 Lpar2-202ENSMUST00000164890 5800 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Smarcd3Q6P9Z1 Lzts3-203ENSMUST00000110260 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC13.44□□□□□ -0.26
Smarcd3Q6P9Z1 Camk2d-206ENSMUST00000106402 4180 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
Smarcd3Q6P9Z1 Per1-203ENSMUST00000102605 4537 ntAPPRIS ALT2 TSL 1 (best) BASIC13.44□□□□□ -0.26
Smarcd3Q6P9Z1 Mdfic-203ENSMUST00000125326 3635 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
Smarcd3Q6P9Z1 Plod2-201ENSMUST00000070522 3649 ntAPPRIS P3 TSL 1 (best) BASIC13.44□□□□□ -0.26
Smarcd3Q6P9Z1 Gm43951-201ENSMUST00000204457 2889 ntAPPRIS P1 BASIC13.44□□□□□ -0.26
Smarcd3Q6P9Z1 Csnk1g2-202ENSMUST00000085435 1825 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Smarcd3Q6P9Z1 Taf3-201ENSMUST00000026888 4792 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Smarcd3Q6P9Z1 Kcp-201ENSMUST00000078112 4775 ntTSL 5 BASIC13.44□□□□□ -0.26
Smarcd3Q6P9Z1 Stap2-201ENSMUST00000043785 1491 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Smarcd3Q6P9Z1 D430041D05Rik-201ENSMUST00000089726 10124 ntAPPRIS P1 TSL 5 BASIC13.44□□□□□ -0.26
Smarcd3Q6P9Z1 Eloa-201ENSMUST00000030427 4708 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Smarcd3Q6P9Z1 Gm26608-201ENSMUST00000180740 1954 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
Smarcd3Q6P9Z1 Gm11467-201ENSMUST00000129407 674 ntTSL 3 BASIC13.44□□□□□ -0.26
Smarcd3Q6P9Z1 CT010506.4-201ENSMUST00000225457 351 ntBASIC13.44□□□□□ -0.26
Smarcd3Q6P9Z1 Birc2-201ENSMUST00000054878 378 ntBASIC13.44□□□□□ -0.26
Smarcd3Q6P9Z1 Vav1-201ENSMUST00000005889 2963 ntAPPRIS P3 TSL 1 (best) BASIC13.44□□□□□ -0.26
Smarcd3Q6P9Z1 Sdhc-201ENSMUST00000081560 815 ntTSL 3 BASIC13.44□□□□□ -0.26
Smarcd3Q6P9Z1 Aurkaip1-201ENSMUST00000084097 1159 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Smarcd3Q6P9Z1 Anks1b-213ENSMUST00000182284 2607 ntTSL 5 BASIC13.44□□□□□ -0.26
Smarcd3Q6P9Z1 Mink1-203ENSMUST00000079244 4829 ntAPPRIS ALT2 TSL 1 (best) BASIC13.44□□□□□ -0.26
Smarcd3Q6P9Z1 Prpf31-202ENSMUST00000108636 1798 ntTSL 5 BASIC13.44□□□□□ -0.26
Smarcd3Q6P9Z1 Comt-202ENSMUST00000115609 1786 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Smarcd3Q6P9Z1 Gm21451-201ENSMUST00000111062 2775 ntBASIC13.44□□□□□ -0.26
Smarcd3Q6P9Z1 Dnm1-205ENSMUST00000113365 3257 ntAPPRIS ALT1 TSL 5 BASIC13.44□□□□□ -0.26
Smarcd3Q6P9Z1 AI661453-201ENSMUST00000037701 1410 ntAPPRIS ALT2 TSL 1 (best) BASIC13.44□□□□□ -0.26
Smarcd3Q6P9Z1 Irf1-201ENSMUST00000019043 2069 ntAPPRIS P3 TSL 1 (best) BASIC13.44□□□□□ -0.26
Smarcd3Q6P9Z1 Gm20743-201ENSMUST00000191735 1576 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
Smarcd3Q6P9Z1 Wnk1-203ENSMUST00000088644 11330 ntAPPRIS ALT2 TSL 5 BASIC13.44□□□□□ -0.26
Smarcd3Q6P9Z1 Smg9-201ENSMUST00000002280 2242 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Smarcd3Q6P9Z1 Nop9-201ENSMUST00000019441 3694 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Smarcd3Q6P9Z1 Six1-201ENSMUST00000050029 3316 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Smarcd3Q6P9Z1 Pqlc1-203ENSMUST00000123750 2004 ntAPPRIS ALT2 TSL 1 (best) BASIC13.44□□□□□ -0.26
Smarcd3Q6P9Z1 Palld-203ENSMUST00000121493 5445 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
Smarcd3Q6P9Z1 Gm45188-201ENSMUST00000207592 1369 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
Smarcd3Q6P9Z1 Mfsd6-201ENSMUST00000087701 3493 ntAPPRIS ALT2 TSL 1 (best) BASIC13.44□□□□□ -0.26
Smarcd3Q6P9Z1 Riox2-201ENSMUST00000023407 2159 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Smarcd3Q6P9Z1 Gm10010-201ENSMUST00000071101 2346 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
Smarcd3Q6P9Z1 Leng9-201ENSMUST00000058358 2460 ntAPPRIS P1 BASIC13.44□□□□□ -0.26
Smarcd3Q6P9Z1 Iqce-202ENSMUST00000077890 2494 ntAPPRIS ALT2 TSL 1 (best) BASIC13.44□□□□□ -0.26
Smarcd3Q6P9Z1 Gm28496-202ENSMUST00000137742 2752 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
Smarcd3Q6P9Z1 Eif2a-201ENSMUST00000029387 2299 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Smarcd3Q6P9Z1 Ccp110-202ENSMUST00000106557 5073 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Smarcd3Q6P9Z1 Gins4-201ENSMUST00000033950 1349 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Smarcd3Q6P9Z1 Ssbp2-201ENSMUST00000004094 3957 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Smarcd3Q6P9Z1 Kif3c-205ENSMUST00000220210 4144 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Smarcd3Q6P9Z1 Stx5a-201ENSMUST00000010254 1780 ntAPPRIS ALT2 TSL 5 BASIC13.43□□□□□ -0.26
Smarcd3Q6P9Z1 Tomm34-202ENSMUST00000109384 1923 ntAPPRIS ALT1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Smarcd3Q6P9Z1 Dlx6-202ENSMUST00000160937 2216 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Smarcd3Q6P9Z1 Gatm-201ENSMUST00000028624 2389 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Smarcd3Q6P9Z1 Pdcd6ip-201ENSMUST00000035086 5951 ntAPPRIS P3 TSL 1 (best) BASIC13.43□□□□□ -0.26
Smarcd3Q6P9Z1 Psma3-204ENSMUST00000160864 859 ntTSL 5 BASIC13.43□□□□□ -0.26
Smarcd3Q6P9Z1 Rfesd-203ENSMUST00000179078 1436 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Smarcd3Q6P9Z1 Gm21887-202ENSMUST00000179760 483 ntAPPRIS ALT2 TSL 5 BASIC13.43□□□□□ -0.26
Smarcd3Q6P9Z1 Epha1-203ENSMUST00000204357 2948 ntTSL 5 BASIC13.43□□□□□ -0.26
Smarcd3Q6P9Z1 Umpk-ps-201ENSMUST00000211897 827 ntBASIC13.43□□□□□ -0.26
Smarcd3Q6P9Z1 Dnase2a-201ENSMUST00000003910 1715 ntAPPRIS P2 TSL 1 (best) BASIC13.43□□□□□ -0.26
Smarcd3Q6P9Z1 Spred2-202ENSMUST00000093299 4449 ntTSL 5 BASIC13.43□□□□□ -0.26
Smarcd3Q6P9Z1 Cpne1-202ENSMUST00000109607 3441 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Smarcd3Q6P9Z1 Grm7-201ENSMUST00000071076 3127 ntAPPRIS ALT1 TSL 5 BASIC13.43□□□□□ -0.26
Smarcd3Q6P9Z1 Atp13a2-201ENSMUST00000037055 3956 ntAPPRIS P3 TSL 1 (best) BASIC13.43□□□□□ -0.26
Smarcd3Q6P9Z1 Mcf2l-207ENSMUST00000110876 5253 ntAPPRIS P2 TSL 1 (best) BASIC13.43□□□□□ -0.26
Smarcd3Q6P9Z1 Thnsl2-202ENSMUST00000160918 2077 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Smarcd3Q6P9Z1 Fmnl2-205ENSMUST00000155586 3939 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
Retrieved 100 of 76,532 protein–RNA pairs in 72.3 ms