Protein–RNA interactions for Protein: Q6NVF9

Cpsf6, Cleavage and polyadenylation specificity factor subunit 6, mousemouse

Known RBP Predictions only

Length 551 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cpsf6Q6NVF9 Cops9-202ENSMUST00000112999 653 ntTSL 3 BASIC14.19□□□□□ -0.14
Cpsf6Q6NVF9 Mras-202ENSMUST00000119472 1190 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Cpsf6Q6NVF9 Slc39a1-ps-201ENSMUST00000120862 969 ntBASIC14.19□□□□□ -0.14
Cpsf6Q6NVF9 Gm13375-201ENSMUST00000126967 854 ntTSL 2 BASIC14.19□□□□□ -0.14
Cpsf6Q6NVF9 Gm16160-201ENSMUST00000160105 781 ntTSL 2 BASIC14.19□□□□□ -0.14
Cpsf6Q6NVF9 Gm15758-201ENSMUST00000161681 695 ntTSL 5 BASIC14.19□□□□□ -0.14
Cpsf6Q6NVF9 Retsat-204ENSMUST00000176168 1203 ntTSL 5 BASIC14.19□□□□□ -0.14
Cpsf6Q6NVF9 Klf13-204ENSMUST00000185175 487 ntTSL 2 BASIC14.19□□□□□ -0.14
Cpsf6Q6NVF9 Gm9932-201ENSMUST00000194154 2116 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Cpsf6Q6NVF9 Ap2s1-204ENSMUST00000205607 372 ntTSL 3 BASIC14.19□□□□□ -0.14
Cpsf6Q6NVF9 Ndufs6-204ENSMUST00000223293 757 ntTSL 2 BASIC14.19□□□□□ -0.14
Cpsf6Q6NVF9 AC133598.3-202ENSMUST00000224219 531 ntBASIC14.19□□□□□ -0.14
Cpsf6Q6NVF9 Klhl33-204ENSMUST00000227271 5513 ntAPPRIS P1 BASIC14.19□□□□□ -0.14
Cpsf6Q6NVF9 Acat3-201ENSMUST00000043923 2123 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Cpsf6Q6NVF9 2010003K11Rik-201ENSMUST00000048482 1165 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Cpsf6Q6NVF9 Mrpl34-201ENSMUST00000048914 607 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Cpsf6Q6NVF9 Pard3-222ENSMUST00000162536 5175 ntAPPRIS ALT2 TSL 5 BASIC14.19□□□□□ -0.14
Cpsf6Q6NVF9 Klhl11-201ENSMUST00000056665 2393 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Cpsf6Q6NVF9 Gpank1-202ENSMUST00000165306 1518 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Cpsf6Q6NVF9 Rhpn1-201ENSMUST00000023244 1932 ntAPPRIS P3 TSL 1 (best) BASIC14.19□□□□□ -0.14
Cpsf6Q6NVF9 Iqce-202ENSMUST00000077890 2494 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Cpsf6Q6NVF9 Dnajc7-201ENSMUST00000014339 2330 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Cpsf6Q6NVF9 Cry2-202ENSMUST00000111278 2160 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Cpsf6Q6NVF9 Pbx3-201ENSMUST00000040638 2587 ntAPPRIS P3 TSL 1 (best) BASIC14.19□□□□□ -0.14
Cpsf6Q6NVF9 Dnase1l2-202ENSMUST00000119932 1629 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Cpsf6Q6NVF9 Clec16a-211ENSMUST00000155633 6213 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Cpsf6Q6NVF9 Syt17-204ENSMUST00000203796 2957 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Cpsf6Q6NVF9 Vav1-201ENSMUST00000005889 2963 ntAPPRIS P3 TSL 1 (best) BASIC14.19□□□□□ -0.14
Cpsf6Q6NVF9 Psen2-201ENSMUST00000010753 2004 ntAPPRIS P2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Cpsf6Q6NVF9 Fam131a-201ENSMUST00000056518 2432 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Cpsf6Q6NVF9 Rasa4-201ENSMUST00000042135 2914 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Cpsf6Q6NVF9 Foxi1-201ENSMUST00000060271 2357 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Cpsf6Q6NVF9 Gm8096-201ENSMUST00000209921 1591 ntBASIC14.18□□□□□ -0.14
Cpsf6Q6NVF9 Eif4g1-204ENSMUST00000115460 5638 ntAPPRIS P3 TSL 5 BASIC14.18□□□□□ -0.14
Cpsf6Q6NVF9 Elfn2-201ENSMUST00000088592 4846 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Cpsf6Q6NVF9 Ppp2r5b-201ENSMUST00000025695 2742 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Cpsf6Q6NVF9 Pdia2-202ENSMUST00000120333 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Cpsf6Q6NVF9 Guca1b-201ENSMUST00000024774 1668 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Cpsf6Q6NVF9 Slc8a3-201ENSMUST00000064594 4379 ntAPPRIS ALT1 TSL 5 BASIC14.18□□□□□ -0.14
Cpsf6Q6NVF9 Tle3-201ENSMUST00000034820 4646 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Cpsf6Q6NVF9 Sh2b2-201ENSMUST00000005188 2848 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Cpsf6Q6NVF9 Hist1h4n-201ENSMUST00000102979 430 ntAPPRIS P1 BASIC14.18□□□□□ -0.14
Cpsf6Q6NVF9 Hist1h4m-201ENSMUST00000104941 402 ntAPPRIS P1 BASIC14.18□□□□□ -0.14
Cpsf6Q6NVF9 Gm14140-201ENSMUST00000119999 995 ntBASIC14.18□□□□□ -0.14
Cpsf6Q6NVF9 Gm12981-201ENSMUST00000131733 622 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Cpsf6Q6NVF9 Gm23547-201ENSMUST00000158210 271 ntBASIC14.18□□□□□ -0.14
Cpsf6Q6NVF9 Sssca1-203ENSMUST00000159693 705 ntTSL 3 BASIC14.18□□□□□ -0.14
Cpsf6Q6NVF9 Gm2272-201ENSMUST00000194903 582 ntBASIC14.18□□□□□ -0.14
Cpsf6Q6NVF9 5430427M07Rik-202ENSMUST00000221524 1023 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Cpsf6Q6NVF9 Il17b-201ENSMUST00000025471 692 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Cpsf6Q6NVF9 Pold4-201ENSMUST00000025773 910 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Cpsf6Q6NVF9 Kcnj8-201ENSMUST00000032374 2269 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Cpsf6Q6NVF9 Pank4-201ENSMUST00000030931 2508 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Cpsf6Q6NVF9 Asah1-201ENSMUST00000034000 2773 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Cpsf6Q6NVF9 Wdr73-201ENSMUST00000026816 2114 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Cpsf6Q6NVF9 3830417A13Rik-201ENSMUST00000033522 1649 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Cpsf6Q6NVF9 Atp2b3-202ENSMUST00000088429 4483 ntAPPRIS P2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Cpsf6Q6NVF9 Lrp11-203ENSMUST00000130590 3220 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Cpsf6Q6NVF9 Csdc2-201ENSMUST00000038757 2490 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Cpsf6Q6NVF9 Gli1-201ENSMUST00000026474 4057 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Cpsf6Q6NVF9 Ralgapb-201ENSMUST00000046274 8366 ntAPPRIS ALT1 TSL 5 BASIC14.18□□□□□ -0.14
Cpsf6Q6NVF9 Slc27a5-202ENSMUST00000120903 1468 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Cpsf6Q6NVF9 Rspry1-207ENSMUST00000212729 2800 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Cpsf6Q6NVF9 Ncf1-201ENSMUST00000016094 2763 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Cpsf6Q6NVF9 Cdc42ep1-201ENSMUST00000059619 2542 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Cpsf6Q6NVF9 Coil-202ENSMUST00000107898 3120 ntAPPRIS P1 TSL 5 BASIC14.17□□□□□ -0.14
Cpsf6Q6NVF9 Aldh1b1-201ENSMUST00000044384 2298 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Cpsf6Q6NVF9 Dbndd1-201ENSMUST00000176155 1677 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Cpsf6Q6NVF9 Anks1b-213ENSMUST00000182284 2607 ntTSL 5 BASIC14.17□□□□□ -0.14
Cpsf6Q6NVF9 Anxa4-201ENSMUST00000001187 2002 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Cpsf6Q6NVF9 Acot3-201ENSMUST00000021653 3431 ntAPPRIS P3 TSL 1 (best) BASIC14.17□□□□□ -0.14
Cpsf6Q6NVF9 Mib1-201ENSMUST00000052838 10231 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Cpsf6Q6NVF9 Spsb1-203ENSMUST00000105685 1537 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Cpsf6Q6NVF9 Asprv1-201ENSMUST00000043400 1547 ntAPPRIS P1 BASIC14.17□□□□□ -0.14
Cpsf6Q6NVF9 Rab9b-201ENSMUST00000058814 3980 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Cpsf6Q6NVF9 Pcolce-201ENSMUST00000031731 1626 ntAPPRIS P2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Cpsf6Q6NVF9 Rrp1b-201ENSMUST00000081339 4874 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Cpsf6Q6NVF9 Rpl34-ps1-201ENSMUST00000121998 354 ntBASIC14.17□□□□□ -0.14
Cpsf6Q6NVF9 Gm8597-201ENSMUST00000191525 1109 ntBASIC14.17□□□□□ -0.14
Cpsf6Q6NVF9 Samd13-205ENSMUST00000197989 591 ntTSL 5 BASIC14.17□□□□□ -0.14
Cpsf6Q6NVF9 Hddc3-206ENSMUST00000206074 565 ntTSL 2 BASIC14.17□□□□□ -0.14
Cpsf6Q6NVF9 Mdk-202ENSMUST00000069423 773 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Cpsf6Q6NVF9 Rpl34-ps2-201ENSMUST00000081679 354 ntBASIC14.17□□□□□ -0.14
Cpsf6Q6NVF9 Gm10154-201ENSMUST00000084445 354 ntBASIC14.17□□□□□ -0.14
Cpsf6Q6NVF9 Chst10-205ENSMUST00000193441 4999 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Cpsf6Q6NVF9 Rgs3-201ENSMUST00000065870 4698 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Cpsf6Q6NVF9 Kcnf1-201ENSMUST00000170580 4789 ntAPPRIS P1 BASIC14.17□□□□□ -0.14
Cpsf6Q6NVF9 Tbx3os1-206ENSMUST00000202307 1787 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Cpsf6Q6NVF9 Gm4756-202ENSMUST00000208039 2344 ntAPPRIS P1 TSL 5 BASIC14.16□□□□□ -0.14
Cpsf6Q6NVF9 Cyp27a1-201ENSMUST00000027356 1892 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Cpsf6Q6NVF9 Ggh-201ENSMUST00000098242 1965 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Cpsf6Q6NVF9 Coro6-201ENSMUST00000021190 1418 ntAPPRIS P5 TSL 1 (best) BASIC14.16□□□□□ -0.14
Cpsf6Q6NVF9 Upk1a-201ENSMUST00000006476 1421 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Cpsf6Q6NVF9 Mus81-202ENSMUST00000124334 2067 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Cpsf6Q6NVF9 Synm-204ENSMUST00000208231 4457 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Cpsf6Q6NVF9 Gm11738-201ENSMUST00000134069 2158 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Cpsf6Q6NVF9 Phykpl-201ENSMUST00000020625 1609 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Cpsf6Q6NVF9 Rexo4-201ENSMUST00000064244 2281 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Cpsf6Q6NVF9 Krt74-201ENSMUST00000088018 1648 ntAPPRIS P1 TSL 2 BASIC14.16□□□□□ -0.14
Cpsf6Q6NVF9 Scap-201ENSMUST00000098350 4227 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Retrieved 100 of 76,532 protein–RNA pairs in 300.5 ms