Protein–RNA interactions for Protein: Q64727

Vcl, Vinculin, mousemouse

Known RBP Predictions only

Length 1,066 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VclQ64727 Med11-202ENSMUST00000151013 445 ntTSL 2 BASIC14.39□□□□□ -0.11
VclQ64727 Gm40123-201ENSMUST00000198175 1027 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
VclQ64727 Gm43125-201ENSMUST00000201724 730 ntBASIC14.39□□□□□ -0.11
VclQ64727 Gata4-202ENSMUST00000118022 3374 ntAPPRIS P3 TSL 1 (best) BASIC14.39□□□□□ -0.11
VclQ64727 C2cd2l-201ENSMUST00000065080 4337 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
VclQ64727 Cdadc1-204ENSMUST00000171683 1892 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
VclQ64727 Muc3a-201ENSMUST00000179412 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
VclQ64727 Rnf217-201ENSMUST00000081989 11013 ntAPPRIS P1 TSL 5 BASIC14.39□□□□□ -0.11
VclQ64727 Rnaseh2a-203ENSMUST00000109738 2044 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
VclQ64727 Mrap2-203ENSMUST00000179313 2039 ntAPPRIS P1 TSL 2 BASIC14.39□□□□□ -0.11
VclQ64727 Dagla-201ENSMUST00000039327 5634 ntAPPRIS P1 TSL 5 BASIC14.39□□□□□ -0.11
VclQ64727 Cdk16-201ENSMUST00000033380 3120 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
VclQ64727 Slc4a5-203ENSMUST00000113900 3630 ntAPPRIS ALT2 TSL 5 BASIC14.39□□□□□ -0.11
VclQ64727 Xrcc1-201ENSMUST00000063249 2155 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
VclQ64727 Commd10-201ENSMUST00000049388 1561 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
VclQ64727 Cep63-201ENSMUST00000093791 2696 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
VclQ64727 Tle3-201ENSMUST00000034820 4646 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
VclQ64727 Med25-210ENSMUST00000208253 3693 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
VclQ64727 Osr2-201ENSMUST00000022952 1724 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
VclQ64727 Krt25-201ENSMUST00000038004 1989 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
VclQ64727 Phka1-201ENSMUST00000043596 5938 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
VclQ64727 Fgf13-203ENSMUST00000119833 2237 ntTSL 5 BASIC14.38□□□□□ -0.11
VclQ64727 Gjb3-202ENSMUST00000106091 1623 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
VclQ64727 Repin1-202ENSMUST00000118229 3138 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
VclQ64727 Heg1-205ENSMUST00000152782 8161 ntAPPRIS ALT2 TSL 5 BASIC14.38□□□□□ -0.11
VclQ64727 Hnrnpa2b1-210ENSMUST00000204188 1518 ntTSL 5 BASIC14.38□□□□□ -0.11
VclQ64727 Zfp362-201ENSMUST00000071108 2674 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
VclQ64727 Plekhb1-202ENSMUST00000107043 931 ntTSL 2 BASIC14.38□□□□□ -0.11
VclQ64727 Dpm3-202ENSMUST00000107462 827 ntAPPRIS P1 TSL 3 BASIC14.38□□□□□ -0.11
VclQ64727 Apip-201ENSMUST00000011055 919 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
VclQ64727 Trav13-3-201ENSMUST00000117226 336 ntBASIC14.38□□□□□ -0.11
VclQ64727 Rps13-ps4-201ENSMUST00000117927 456 ntBASIC14.38□□□□□ -0.11
VclQ64727 Rps13-ps5-201ENSMUST00000117939 456 ntBASIC14.38□□□□□ -0.11
VclQ64727 Gm15483-201ENSMUST00000120338 456 ntBASIC14.38□□□□□ -0.11
VclQ64727 Hoga1-204ENSMUST00000172244 631 ntTSL 5 BASIC14.38□□□□□ -0.11
VclQ64727 Rabep1-208ENSMUST00000179114 1264 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
VclQ64727 Gm38225-201ENSMUST00000194001 393 ntBASIC14.38□□□□□ -0.11
VclQ64727 6030443J06Rik-204ENSMUST00000195898 786 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
VclQ64727 Gm5312-201ENSMUST00000203728 547 ntBASIC14.38□□□□□ -0.11
VclQ64727 Cdipt-205ENSMUST00000206450 951 ntTSL 5 BASIC14.38□□□□□ -0.11
VclQ64727 AC131710.1-201ENSMUST00000228336 990 ntBASIC14.38□□□□□ -0.11
VclQ64727 1700018B24Rik-201ENSMUST00000036023 593 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
VclQ64727 Endou-202ENSMUST00000100249 2405 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
VclQ64727 8430429K09Rik-204ENSMUST00000146456 1675 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
VclQ64727 Foxj3-201ENSMUST00000044564 4789 ntAPPRIS P3 TSL 1 (best) BASIC14.38□□□□□ -0.11
VclQ64727 Ccdc43-205ENSMUST00000164506 2316 ntAPPRIS ALT1 TSL 5 BASIC14.38□□□□□ -0.11
VclQ64727 2810408A11Rik-202ENSMUST00000100969 1437 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
VclQ64727 Actg1-204ENSMUST00000106215 1827 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
VclQ64727 Emc7-201ENSMUST00000069747 5826 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
VclQ64727 Gm6018-201ENSMUST00000216090 1306 ntBASIC14.38□□□□□ -0.11
VclQ64727 Diaph2-207ENSMUST00000167619 8439 ntAPPRIS ALT2 TSL 5 BASIC14.38□□□□□ -0.11
VclQ64727 Dcun1d3-203ENSMUST00000106519 1475 ntAPPRIS P1 TSL 5 BASIC14.38□□□□□ -0.11
VclQ64727 AC164565.1-201ENSMUST00000217520 1484 ntBASIC14.38□□□□□ -0.11
VclQ64727 Phldb1-211ENSMUST00000135436 2844 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
VclQ64727 Gm12522-201ENSMUST00000142833 2439 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
VclQ64727 Eif2d-202ENSMUST00000068805 2009 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
VclQ64727 Lat2-201ENSMUST00000036362 1637 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
VclQ64727 Tle3-205ENSMUST00000159630 4065 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
VclQ64727 Ubtf-205ENSMUST00000107119 3013 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
VclQ64727 Sympk-201ENSMUST00000023882 4116 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
VclQ64727 Trim65-201ENSMUST00000067632 3048 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
VclQ64727 Reck-201ENSMUST00000030198 4433 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
VclQ64727 Myrf-201ENSMUST00000088013 5674 ntAPPRIS ALT2 TSL 5 BASIC14.37□□□□□ -0.11
VclQ64727 Gm27198-201ENSMUST00000184172 1517 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
VclQ64727 Lhx3-201ENSMUST00000028302 2223 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
VclQ64727 Tnfaip8l1-201ENSMUST00000077788 2379 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
VclQ64727 Hsph1-209ENSMUST00000202089 3054 ntTSL 5 BASIC14.37□□□□□ -0.11
VclQ64727 Dnajc8-205ENSMUST00000105939 746 ntTSL 5 BASIC14.37□□□□□ -0.11
VclQ64727 Gm2810-201ENSMUST00000118681 990 ntBASIC14.37□□□□□ -0.11
VclQ64727 Tpt1-ps6-201ENSMUST00000121768 523 ntBASIC14.37□□□□□ -0.11
VclQ64727 Gm11505-201ENSMUST00000130442 737 ntTSL 3 BASIC14.37□□□□□ -0.11
VclQ64727 Coasy-201ENSMUST00000001806 2138 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
VclQ64727 Gm26840-201ENSMUST00000180784 2980 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
VclQ64727 Gm27920-201ENSMUST00000183953 96 ntBASIC14.37□□□□□ -0.11
VclQ64727 Elof1-203ENSMUST00000213233 810 ntAPPRIS P1 TSL 3 BASIC14.37□□□□□ -0.11
VclQ64727 AC166341.4-201ENSMUST00000220625 123 ntBASIC14.37□□□□□ -0.11
VclQ64727 Sbk2-201ENSMUST00000032598 1139 ntAPPRIS P1 TSL 3 BASIC14.37□□□□□ -0.11
VclQ64727 Ube2l6-201ENSMUST00000102642 1560 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
VclQ64727 Fbxo8-202ENSMUST00000110322 1709 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
VclQ64727 Lmna-203ENSMUST00000120377 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
VclQ64727 Fdft1-204ENSMUST00000224625 3698 ntAPPRIS P1 BASIC14.37□□□□□ -0.11
VclQ64727 Rrnad1-206ENSMUST00000160074 1620 ntTSL 5 BASIC14.37□□□□□ -0.11
VclQ64727 Gm5357-201ENSMUST00000212720 1924 ntBASIC14.37□□□□□ -0.11
VclQ64727 Spdef-202ENSMUST00000114870 2070 ntAPPRIS P1 TSL 5 BASIC14.37□□□□□ -0.11
VclQ64727 Rgs14-201ENSMUST00000063771 2356 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
VclQ64727 Gm3373-202ENSMUST00000177556 1955 ntAPPRIS P5 TSL 5 BASIC14.36□□□□□ -0.11
VclQ64727 Gm3500-201ENSMUST00000177986 1955 ntAPPRIS P1 TSL 5 BASIC14.36□□□□□ -0.11
VclQ64727 Gm17396-201ENSMUST00000172075 1655 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
VclQ64727 Skor1-201ENSMUST00000055281 3657 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
VclQ64727 Sybu-201ENSMUST00000090057 3230 ntAPPRIS P4 TSL 1 (best) BASIC14.36□□□□□ -0.11
VclQ64727 Fzd6-202ENSMUST00000179165 4325 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
VclQ64727 Fgfr3-203ENSMUST00000114411 4225 ntAPPRIS ALT2 TSL 5 BASIC14.36□□□□□ -0.11
VclQ64727 Slc25a22-201ENSMUST00000019226 2811 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
VclQ64727 Zfp212-201ENSMUST00000009411 2801 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
VclQ64727 Ren1-201ENSMUST00000094556 1592 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
VclQ64727 Gm37305-201ENSMUST00000195714 4279 ntBASIC14.36□□□□□ -0.11
VclQ64727 Ppp4r4-201ENSMUST00000021631 3964 ntAPPRIS P2 TSL 1 (best) BASIC14.36□□□□□ -0.11
VclQ64727 Ighv4-1-201ENSMUST00000103464 414 ntAPPRIS P1 BASIC14.36□□□□□ -0.11
VclQ64727 Gm25287-201ENSMUST00000103846 110 ntBASIC14.36□□□□□ -0.11
VclQ64727 Gm22918-201ENSMUST00000103855 110 ntBASIC14.36□□□□□ -0.11
Retrieved 100 of 76,532 protein–RNA pairs in 33.3 ms