Protein–RNA interactions for Protein: Q62205

Scn9a, Sodium channel protein type 9 subunit alpha, mousemouse

Predictions only

Length 1,984 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn9aQ62205 Gm33460-201ENSMUST00000212286 536 ntTSL 5 BASIC16.95■□□□□ 0.3
Scn9aQ62205 Polr2e-201ENSMUST00000004786 1148 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Scn9aQ62205 Slc22a3-201ENSMUST00000024595 3501 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Scn9aQ62205 Erf-201ENSMUST00000045847 3505 ntAPPRIS P2 TSL 1 (best) BASIC16.95■□□□□ 0.3
Scn9aQ62205 Mapt-202ENSMUST00000106988 2202 ntAPPRIS ALT2 TSL 5 BASIC16.95■□□□□ 0.3
Scn9aQ62205 Errfi1-201ENSMUST00000030811 3043 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Scn9aQ62205 Fam174b-201ENSMUST00000107456 2683 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Scn9aQ62205 Prelid1-201ENSMUST00000021942 2644 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Scn9aQ62205 Gm18222-201ENSMUST00000202416 1387 ntBASIC16.95■□□□□ 0.3
Scn9aQ62205 Gm5940-201ENSMUST00000117582 1068 ntBASIC16.95■□□□□ 0.3
Scn9aQ62205 H60b-202ENSMUST00000131558 1080 ntAPPRIS P1 TSL 5 BASIC16.95■□□□□ 0.3
Scn9aQ62205 4933427I22Rik-201ENSMUST00000138672 393 ntTSL 3 BASIC16.95■□□□□ 0.3
Scn9aQ62205 Gm24644-201ENSMUST00000157114 139 ntBASIC16.95■□□□□ 0.3
Scn9aQ62205 Hspb9-201ENSMUST00000017976 652 ntAPPRIS ALT2 BASIC16.95■□□□□ 0.3
Scn9aQ62205 Gm27572-201ENSMUST00000183702 255 ntBASIC16.95■□□□□ 0.3
Scn9aQ62205 Trib2-204ENSMUST00000221518 1192 ntTSL 5 BASIC16.95■□□□□ 0.3
Scn9aQ62205 Gm7399-201ENSMUST00000032395 858 ntBASIC16.95■□□□□ 0.3
Scn9aQ62205 Csrp3-201ENSMUST00000032658 877 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Scn9aQ62205 Ptbp3-205ENSMUST00000148331 2016 ntAPPRIS ALT2 TSL 5 BASIC16.95■□□□□ 0.3
Scn9aQ62205 Golt1b-201ENSMUST00000032372 2818 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Scn9aQ62205 Pom121l2-202ENSMUST00000117882 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
Scn9aQ62205 Echdc1-202ENSMUST00000160399 1845 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Scn9aQ62205 Gm10564-201ENSMUST00000097750 3113 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
Scn9aQ62205 Rrp1-201ENSMUST00000062678 1984 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Scn9aQ62205 Map3k8-201ENSMUST00000025078 2507 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Scn9aQ62205 Uhrf2-201ENSMUST00000025739 3536 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Scn9aQ62205 Adcy3-202ENSMUST00000124505 4962 ntAPPRIS ALT1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Scn9aQ62205 Gm12928-201ENSMUST00000117115 573 ntBASIC16.94■□□□□ 0.3
Scn9aQ62205 Gm12329-201ENSMUST00000120829 1007 ntBASIC16.94■□□□□ 0.3
Scn9aQ62205 3110053B16Rik-204ENSMUST00000145605 575 ntBASIC16.94■□□□□ 0.3
Scn9aQ62205 Gm26464-201ENSMUST00000157094 305 ntBASIC16.94■□□□□ 0.3
Scn9aQ62205 Dera-204ENSMUST00000203216 688 ntTSL 5 BASIC16.94■□□□□ 0.3
Scn9aQ62205 Fxyd1-217ENSMUST00000206860 594 ntAPPRIS P1 TSL 5 BASIC16.94■□□□□ 0.3
Scn9aQ62205 Tssc1-207ENSMUST00000222407 489 ntTSL 3 BASIC16.94■□□□□ 0.3
Scn9aQ62205 Magi3-201ENSMUST00000064371 6640 ntAPPRIS P3 TSL 1 (best) BASIC16.94■□□□□ 0.3
Scn9aQ62205 Hcn4-201ENSMUST00000034889 6118 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Scn9aQ62205 Rarb-201ENSMUST00000063750 3108 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Scn9aQ62205 Emp2-201ENSMUST00000078357 3440 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Scn9aQ62205 Hist1h1e-201ENSMUST00000062045 1930 ntAPPRIS P1 BASIC16.94■□□□□ 0.3
Scn9aQ62205 Bdh1-202ENSMUST00000115226 1496 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Scn9aQ62205 Zscan30-202ENSMUST00000224144 1458 ntBASIC16.94■□□□□ 0.3
Scn9aQ62205 Apba3-211ENSMUST00000220297 2268 ntAPPRIS P1 TSL 5 BASIC16.94■□□□□ 0.3
Scn9aQ62205 Gcnt2-205ENSMUST00000225759 1366 ntAPPRIS ALT2 BASIC16.93■□□□□ 0.3
Scn9aQ62205 Mid1-206ENSMUST00000112107 3194 ntTSL 5 BASIC16.93■□□□□ 0.3
Scn9aQ62205 Nmi-205ENSMUST00000145481 1162 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Scn9aQ62205 S100a14-202ENSMUST00000167598 1059 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Scn9aQ62205 1700080E11Rik-202ENSMUST00000190661 682 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
Scn9aQ62205 9130604C24Rik-201ENSMUST00000197965 956 ntBASIC16.93■□□□□ 0.3
Scn9aQ62205 Gm39318-201ENSMUST00000214606 1118 ntTSL 3 BASIC16.93■□□□□ 0.3
Scn9aQ62205 Degs2-201ENSMUST00000021691 1287 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Scn9aQ62205 Gm36198-201ENSMUST00000217490 416 ntTSL 3 BASIC16.93■□□□□ 0.3
Scn9aQ62205 AC102291.3-201ENSMUST00000226566 405 ntBASIC16.93■□□□□ 0.3
Scn9aQ62205 Trpt1-201ENSMUST00000088223 1142 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Scn9aQ62205 Ccr9-202ENSMUST00000163559 3004 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Scn9aQ62205 Rnaseh2a-203ENSMUST00000109738 2044 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Scn9aQ62205 Arhgap40-203ENSMUST00000165398 2028 ntAPPRIS P1 TSL 5 BASIC16.93■□□□□ 0.3
Scn9aQ62205 Sgce-205ENSMUST00000115579 1696 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Scn9aQ62205 Arid5a-201ENSMUST00000097778 2270 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
Scn9aQ62205 Mvk-202ENSMUST00000112239 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
Scn9aQ62205 Col15a1-201ENSMUST00000082303 5102 ntAPPRIS ALT2 TSL 2 BASIC16.93■□□□□ 0.3
Scn9aQ62205 BC030336-201ENSMUST00000060175 4831 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Scn9aQ62205 Spcs2-ps-201ENSMUST00000122326 682 ntBASIC16.93■□□□□ 0.3
Scn9aQ62205 A330102I10Rik-202ENSMUST00000140415 682 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
Scn9aQ62205 Mir3102-201ENSMUST00000175555 104 ntBASIC16.93■□□□□ 0.3
Scn9aQ62205 Mir8109-201ENSMUST00000184375 117 ntBASIC16.93■□□□□ 0.3
Scn9aQ62205 2610306M01Rik-201ENSMUST00000185414 1042 ntBASIC16.93■□□□□ 0.3
Scn9aQ62205 1700113H08Rik-202ENSMUST00000189456 974 ntTSL 5 BASIC16.93■□□□□ 0.3
Scn9aQ62205 Gm40493-201ENSMUST00000210223 400 ntTSL 3 BASIC16.93■□□□□ 0.3
Scn9aQ62205 Col13a1-205ENSMUST00000105454 3162 ntAPPRIS P2 TSL 1 (best) BASIC16.93■□□□□ 0.3
Scn9aQ62205 Map7-201ENSMUST00000020173 4252 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
Scn9aQ62205 Carlr-201ENSMUST00000181515 2574 ntBASIC16.93■□□□□ 0.3
Scn9aQ62205 Kcnt1-203ENSMUST00000114172 5219 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
Scn9aQ62205 Prss41-204ENSMUST00000151797 1743 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
Scn9aQ62205 Med15-202ENSMUST00000080936 3263 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
Scn9aQ62205 Kansl1l-201ENSMUST00000068168 4459 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Scn9aQ62205 Thap4-206ENSMUST00000190116 5558 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Scn9aQ62205 Fkbp10-201ENSMUST00000001595 2584 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Scn9aQ62205 Arhgef10-201ENSMUST00000084207 5528 ntAPPRIS P4 TSL 1 (best) BASIC16.92■□□□□ 0.3
Scn9aQ62205 Gm5187-201ENSMUST00000117317 991 ntBASIC16.92■□□□□ 0.3
Scn9aQ62205 Gm15376-201ENSMUST00000122258 783 ntBASIC16.92■□□□□ 0.3
Scn9aQ62205 Gm15351-201ENSMUST00000123920 419 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
Scn9aQ62205 Gm27847-201ENSMUST00000183711 107 ntBASIC16.92■□□□□ 0.3
Scn9aQ62205 Gm27375-201ENSMUST00000183799 107 ntBASIC16.92■□□□□ 0.3
Scn9aQ62205 Dmac1-201ENSMUST00000030103 741 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Scn9aQ62205 Ahcy-201ENSMUST00000054607 2543 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Scn9aQ62205 Fam3a-205ENSMUST00000114142 1586 ntAPPRIS P1 TSL 5 BASIC16.92■□□□□ 0.3
Scn9aQ62205 Loxl4-203ENSMUST00000164786 2617 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
Scn9aQ62205 Kdm3b-201ENSMUST00000043775 6363 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Scn9aQ62205 Nt5c3b-202ENSMUST00000092689 1344 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
Scn9aQ62205 Dctn4-202ENSMUST00000223590 1530 ntBASIC16.92■□□□□ 0.3
Scn9aQ62205 Jaml-204ENSMUST00000215880 1704 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Scn9aQ62205 Ifi47-204ENSMUST00000213728 1678 ntAPPRIS P1 TSL 5 BASIC16.91■□□□□ 0.3
Scn9aQ62205 Gm13689-201ENSMUST00000119360 685 ntBASIC16.91■□□□□ 0.3
Scn9aQ62205 St6galnac6-209ENSMUST00000131229 1013 ntTSL 2 BASIC16.91■□□□□ 0.3
Scn9aQ62205 Cox6b2-204ENSMUST00000182173 391 ntTSL 2 BASIC16.91■□□□□ 0.3
Scn9aQ62205 Carmn-202ENSMUST00000182244 988 ntTSL 2 BASIC16.91■□□□□ 0.3
Scn9aQ62205 Gm43240-201ENSMUST00000198543 630 ntTSL 3 BASIC16.91■□□□□ 0.3
Scn9aQ62205 Gm9299-201ENSMUST00000206392 1140 ntBASIC16.91■□□□□ 0.3
Scn9aQ62205 Gm6983-201ENSMUST00000214912 628 ntBASIC16.91■□□□□ 0.3
Scn9aQ62205 Aym1-201ENSMUST00000066573 528 ntAPPRIS P1 BASIC16.91■□□□□ 0.3
Retrieved 100 of 76,532 protein–RNA pairs in 41.2 ms