Protein–RNA interactions for Protein: Q62158

Trim27, Zinc finger protein RFP, mousemouse

Predictions only

Length 513 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim27Q62158 Mymx-202ENSMUST00000169137 616 ntAPPRIS P4 TSL 2 BASIC17.97■□□□□ 0.47
Trim27Q62158 Trip6-203ENSMUST00000199121 366 ntTSL 3 BASIC17.97■□□□□ 0.47
Trim27Q62158 1700030N18Rik-201ENSMUST00000202497 966 ntBASIC17.97■□□□□ 0.47
Trim27Q62158 Gm9182-201ENSMUST00000217829 639 ntBASIC17.97■□□□□ 0.47
Trim27Q62158 AC121788.1-202ENSMUST00000218801 871 ntTSL 5 BASIC17.97■□□□□ 0.47
Trim27Q62158 Gm5628-201ENSMUST00000222318 1049 ntBASIC17.97■□□□□ 0.47
Trim27Q62158 AC155729.1-201ENSMUST00000227758 544 ntBASIC17.97■□□□□ 0.47
Trim27Q62158 Spr-201ENSMUST00000045986 1230 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Trim27Q62158 Cadps2-206ENSMUST00000115361 4571 ntAPPRIS ALT2 TSL 1 (best) BASIC17.97■□□□□ 0.47
Trim27Q62158 Pcyox1l-201ENSMUST00000025472 2017 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Trim27Q62158 Adgrb2-201ENSMUST00000030571 4734 ntAPPRIS ALT2 TSL 5 BASIC17.97■□□□□ 0.47
Trim27Q62158 Maea-201ENSMUST00000114449 2193 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Trim27Q62158 Acr-201ENSMUST00000023295 1504 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Trim27Q62158 Sbk2-205ENSMUST00000208109 1422 ntTSL 5 BASIC17.97■□□□□ 0.47
Trim27Q62158 Coq10a-205ENSMUST00000220027 1307 ntAPPRIS ALT2 TSL 5 BASIC17.97■□□□□ 0.47
Trim27Q62158 Itfg1-201ENSMUST00000034140 3306 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Trim27Q62158 Lipo3-201ENSMUST00000025694 2768 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Trim27Q62158 Pgap2-225ENSMUST00000156529 2034 ntAPPRIS P2 TSL 1 (best) BASIC17.96■□□□□ 0.47
Trim27Q62158 Exoc3l-201ENSMUST00000057855 2497 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Trim27Q62158 Il11ra1-201ENSMUST00000098132 2009 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Trim27Q62158 Sowaha-201ENSMUST00000104955 3702 ntAPPRIS P1 BASIC17.96■□□□□ 0.47
Trim27Q62158 Ap4e1-203ENSMUST00000110394 2271 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
Trim27Q62158 Sgpl1-202ENSMUST00000122259 4102 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Trim27Q62158 Plekha1-201ENSMUST00000048180 3321 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
Trim27Q62158 Fbxl4-201ENSMUST00000039234 2546 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Trim27Q62158 Map2k7-211ENSMUST00000145165 2879 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Trim27Q62158 Spag1-202ENSMUST00000171205 3219 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Trim27Q62158 Dnajc8-205ENSMUST00000105939 746 ntTSL 5 BASIC17.96■□□□□ 0.47
Trim27Q62158 Cdkn1a-203ENSMUST00000122348 857 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Trim27Q62158 Gm11201-201ENSMUST00000143473 701 ntTSL 3 BASIC17.96■□□□□ 0.47
Trim27Q62158 Gm11682-201ENSMUST00000144689 516 ntTSL 3 BASIC17.96■□□□□ 0.47
Trim27Q62158 Higd1a-206ENSMUST00000215300 605 ntAPPRIS P1 TSL 3 BASIC17.96■□□□□ 0.47
Trim27Q62158 1700021F07Rik-201ENSMUST00000029023 646 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Trim27Q62158 Slbp-202ENSMUST00000075670 1027 ntAPPRIS ALT2 TSL 1 (best) BASIC17.96■□□□□ 0.47
Trim27Q62158 Tepsin-203ENSMUST00000106225 2566 ntAPPRIS ALT2 TSL 5 BASIC17.96■□□□□ 0.47
Trim27Q62158 Sorbs3-204ENSMUST00000227929 2460 ntBASIC17.96■□□□□ 0.47
Trim27Q62158 Dlat-201ENSMUST00000034567 4035 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Trim27Q62158 Irf3-201ENSMUST00000003284 2031 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Trim27Q62158 Slc25a19-212ENSMUST00000178003 2614 ntAPPRIS P1 TSL 5 BASIC17.96■□□□□ 0.47
Trim27Q62158 Rimkla-201ENSMUST00000049994 4097 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Trim27Q62158 Agpat1-202ENSMUST00000114140 1941 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Trim27Q62158 Pard6b-201ENSMUST00000052125 3399 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.46
Trim27Q62158 Ints14-201ENSMUST00000037504 2837 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Trim27Q62158 Pcdha9-201ENSMUST00000115659 5341 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Trim27Q62158 Coq6-203ENSMUST00000110278 1354 ntAPPRIS ALT2 TSL 5 BASIC17.95■□□□□ 0.46
Trim27Q62158 Gpd1l-204ENSMUST00000146623 4391 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Trim27Q62158 Gm12689-201ENSMUST00000094955 1359 ntAPPRIS P1 BASIC17.95■□□□□ 0.46
Trim27Q62158 Ap4b1-202ENSMUST00000076599 2692 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Trim27Q62158 Aig1-202ENSMUST00000105534 617 ntTSL 5 BASIC17.95■□□□□ 0.46
Trim27Q62158 Asphd1-202ENSMUST00000106339 518 ntAPPRIS P3 TSL 1 (best) BASIC17.95■□□□□ 0.46
Trim27Q62158 Rerg-203ENSMUST00000119610 890 ntTSL 3 BASIC17.95■□□□□ 0.46
Trim27Q62158 Gm14042-201ENSMUST00000120139 833 ntBASIC17.95■□□□□ 0.46
Trim27Q62158 Gm11594-201ENSMUST00000122313 162 ntBASIC17.95■□□□□ 0.46
Trim27Q62158 Gm44123-201ENSMUST00000204662 577 ntTSL 5 BASIC17.95■□□□□ 0.46
Trim27Q62158 Gm18057-201ENSMUST00000208220 503 ntBASIC17.95■□□□□ 0.46
Trim27Q62158 Msantd1-204ENSMUST00000212362 798 ntAPPRIS ALT2 TSL 5 BASIC17.95■□□□□ 0.46
Trim27Q62158 Caly-201ENSMUST00000026541 1220 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Trim27Q62158 Smim8-201ENSMUST00000029972 786 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Trim27Q62158 Gpbar1-201ENSMUST00000077985 1075 ntAPPRIS P1 BASIC17.95■□□□□ 0.46
Trim27Q62158 Dse-201ENSMUST00000048010 4389 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Trim27Q62158 Gnpat-201ENSMUST00000034466 2984 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Trim27Q62158 Oxr1-206ENSMUST00000170127 4251 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
Trim27Q62158 Gcnt4-201ENSMUST00000171324 5087 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Trim27Q62158 Opn5-201ENSMUST00000068355 1824 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Trim27Q62158 Foxs1-201ENSMUST00000099200 1311 ntAPPRIS P1 BASIC17.95■□□□□ 0.46
Trim27Q62158 Slc39a3-202ENSMUST00000117276 3796 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Trim27Q62158 Daxx-201ENSMUST00000079421 2580 ntAPPRIS P2 TSL 1 (best) BASIC17.94■□□□□ 0.46
Trim27Q62158 Vsig10-202ENSMUST00000111967 4236 ntAPPRIS P2 TSL 5 BASIC17.94■□□□□ 0.46
Trim27Q62158 Trim68-205ENSMUST00000210855 2301 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
Trim27Q62158 Ap3s1-201ENSMUST00000025357 1520 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Trim27Q62158 2810408I11Rik-202ENSMUST00000150749 711 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
Trim27Q62158 Gm33785-201ENSMUST00000222961 886 ntTSL 5 BASIC17.94■□□□□ 0.46
Trim27Q62158 AC124549.3-201ENSMUST00000225541 367 ntBASIC17.94■□□□□ 0.46
Trim27Q62158 March3-201ENSMUST00000035278 860 ntAPPRIS P1 TSL 3 BASIC17.94■□□□□ 0.46
Trim27Q62158 Nfat5-211ENSMUST00000151114 4982 ntAPPRIS P3 TSL 1 (best) BASIC17.94■□□□□ 0.46
Trim27Q62158 D130052B06Rik-201ENSMUST00000101371 2295 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Trim27Q62158 Otud6b-201ENSMUST00000117268 3266 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Trim27Q62158 Eomes-201ENSMUST00000035020 3560 ntAPPRIS P3 TSL 1 (best) BASIC17.94■□□□□ 0.46
Trim27Q62158 Marveld2-203ENSMUST00000168772 1888 ntAPPRIS P1 TSL 5 BASIC17.94■□□□□ 0.46
Trim27Q62158 Apbb1-215ENSMUST00000190369 1882 ntTSL 5 BASIC17.94■□□□□ 0.46
Trim27Q62158 Spg20-201ENSMUST00000044116 3770 ntAPPRIS P3 TSL 1 (best) BASIC17.94■□□□□ 0.46
Trim27Q62158 Kcnq2-202ENSMUST00000049792 2920 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
Trim27Q62158 Plppr2-202ENSMUST00000188468 1480 ntAPPRIS ALT2 TSL 5 BASIC17.94■□□□□ 0.46
Trim27Q62158 2810006K23Rik-202ENSMUST00000111477 1637 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
Trim27Q62158 Vps53-201ENSMUST00000056601 2833 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Trim27Q62158 Usp33-202ENSMUST00000117492 3886 ntAPPRIS ALT2 TSL 1 (best) BASIC17.94■□□□□ 0.46
Trim27Q62158 Pgm2l1-202ENSMUST00000084935 8834 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Trim27Q62158 Gm13332-201ENSMUST00000120451 1398 ntBASIC17.93■□□□□ 0.46
Trim27Q62158 Nrxn1-216ENSMUST00000174331 6282 ntAPPRIS ALT1 TSL 5 BASIC17.93■□□□□ 0.46
Trim27Q62158 Bcan-201ENSMUST00000090971 3141 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Trim27Q62158 Chodl-201ENSMUST00000023568 2535 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Trim27Q62158 Trav3-1-201ENSMUST00000103569 385 ntAPPRIS P1 BASIC17.93■□□□□ 0.46
Trim27Q62158 Trav3-4-201ENSMUST00000103670 458 ntAPPRIS P1 BASIC17.93■□□□□ 0.46
Trim27Q62158 Rps10-ps2-201ENSMUST00000127484 496 ntBASIC17.93■□□□□ 0.46
Trim27Q62158 Gm13431-203ENSMUST00000147012 388 ntTSL 2 BASIC17.93■□□□□ 0.46
Trim27Q62158 U2af1l4-216ENSMUST00000166510 835 ntTSL 5 BASIC17.93■□□□□ 0.46
Trim27Q62158 Ccnd3-208ENSMUST00000182539 931 ntTSL 2 BASIC17.93■□□□□ 0.46
Trim27Q62158 Mt3-201ENSMUST00000034211 536 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Trim27Q62158 Ric1-201ENSMUST00000043610 7190 ntAPPRIS P1 TSL 5 BASIC17.93■□□□□ 0.46
Trim27Q62158 Sp8-201ENSMUST00000063918 4478 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Retrieved 100 of 76,532 protein–RNA pairs in 30.4 ms