Protein–RNA interactions for Protein: Q62018

Ctr9, RNA polymerase-associated protein CTR9 homolog, mousemouse

Known RBP Predictions only

Length 1,173 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ctr9Q62018 Gm13034-201ENSMUST00000121342 3177 ntBASIC17.26■□□□□ 0.35
Ctr9Q62018 Tmod2-207ENSMUST00000215462 1564 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Ctr9Q62018 Gm39244-202ENSMUST00000210837 1857 ntTSL 5 BASIC17.26■□□□□ 0.35
Ctr9Q62018 Cdk16-201ENSMUST00000033380 3120 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Ctr9Q62018 Cd5l-201ENSMUST00000015998 2036 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Ctr9Q62018 Pdia3-201ENSMUST00000028683 2770 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Ctr9Q62018 Ankhd1-214ENSMUST00000155329 8223 ntAPPRIS P1 TSL 5 BASIC17.26■□□□□ 0.35
Ctr9Q62018 Wt1-202ENSMUST00000111099 2441 ntTSL 5 BASIC17.26■□□□□ 0.35
Ctr9Q62018 Tnfaip8l1-201ENSMUST00000077788 2379 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Ctr9Q62018 Impdh1-207ENSMUST00000162099 2580 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Ctr9Q62018 Sympk-201ENSMUST00000023882 4116 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Ctr9Q62018 Eif2a-201ENSMUST00000029387 2299 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Ctr9Q62018 H60b-201ENSMUST00000105522 1029 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Ctr9Q62018 Hagh-202ENSMUST00000118788 1191 ntAPPRIS P3 TSL 1 (best) BASIC17.25■□□□□ 0.35
Ctr9Q62018 Zfp511-201ENSMUST00000168194 1076 ntAPPRIS P1 TSL 2 BASIC17.25■□□□□ 0.35
Ctr9Q62018 Gm9726-201ENSMUST00000180321 678 ntBASIC17.25■□□□□ 0.35
Ctr9Q62018 Gm18766-201ENSMUST00000189811 808 ntBASIC17.25■□□□□ 0.35
Ctr9Q62018 Gm10576-201ENSMUST00000191927 825 ntBASIC17.25■□□□□ 0.35
Ctr9Q62018 4930500L23Rik-201ENSMUST00000198000 747 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Ctr9Q62018 Tbc1d1-203ENSMUST00000119756 4760 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
Ctr9Q62018 Zfp202-203ENSMUST00000168832 3329 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Ctr9Q62018 Fam151a-201ENSMUST00000047620 1923 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Ctr9Q62018 Baz1b-201ENSMUST00000002825 6492 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Ctr9Q62018 Cldn14-204ENSMUST00000169391 1456 ntAPPRIS P1 TSL 2 BASIC17.24■□□□□ 0.35
Ctr9Q62018 Trp53-206ENSMUST00000171247 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
Ctr9Q62018 Akirin1-201ENSMUST00000102636 3052 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Ctr9Q62018 Chd4-201ENSMUST00000056889 6697 ntAPPRIS P2 TSL 1 (best) BASIC17.24■□□□□ 0.35
Ctr9Q62018 Islr2-202ENSMUST00000163200 4123 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
Ctr9Q62018 Nupl2-201ENSMUST00000049887 2914 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Ctr9Q62018 Scara3-201ENSMUST00000042046 3597 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Ctr9Q62018 Patz1-202ENSMUST00000093402 3173 ntTSL 2 BASIC17.24■□□□□ 0.35
Ctr9Q62018 Smox-208ENSMUST00000110188 1991 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Ctr9Q62018 Gm20743-201ENSMUST00000191735 1576 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Ctr9Q62018 Nfkb1-201ENSMUST00000029812 4117 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Ctr9Q62018 Abcf2-201ENSMUST00000030795 2569 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Ctr9Q62018 Nelfa-201ENSMUST00000030993 2580 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Ctr9Q62018 Hras-203ENSMUST00000124314 1073 ntTSL 5 BASIC17.24■□□□□ 0.35
Ctr9Q62018 AC155937.1-201ENSMUST00000125635 831 ntAPPRIS P1 TSL 3 BASIC17.24■□□□□ 0.35
Ctr9Q62018 Bricd5-202ENSMUST00000164508 701 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Ctr9Q62018 Rps27l-201ENSMUST00000040917 499 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Ctr9Q62018 Malt1-201ENSMUST00000049248 5073 ntAPPRIS P2 TSL 1 (best) BASIC17.24■□□□□ 0.35
Ctr9Q62018 Kif12-201ENSMUST00000030042 2250 ntAPPRIS P2 TSL 1 (best) BASIC17.24■□□□□ 0.35
Ctr9Q62018 Mrpl58-203ENSMUST00000106539 2522 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Ctr9Q62018 Dsn1-202ENSMUST00000103130 2636 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Ctr9Q62018 Ccer1-201ENSMUST00000060703 1865 ntAPPRIS P1 BASIC17.24■□□□□ 0.35
Ctr9Q62018 Naa15-201ENSMUST00000029303 6090 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Ctr9Q62018 Spcs2-201ENSMUST00000036274 2909 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Ctr9Q62018 Pcdha5-201ENSMUST00000192168 5206 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Ctr9Q62018 Slc25a47-201ENSMUST00000057026 1580 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Ctr9Q62018 Tmem199-201ENSMUST00000052566 1347 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Ctr9Q62018 Cadps2-206ENSMUST00000115361 4571 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
Ctr9Q62018 Lpcat2-201ENSMUST00000046290 2811 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Ctr9Q62018 Arxes2-201ENSMUST00000058119 1532 ntAPPRIS P1 BASIC17.23■□□□□ 0.35
Ctr9Q62018 Mettl2-201ENSMUST00000021030 1867 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Ctr9Q62018 Gm13306-202ENSMUST00000108018 542 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
Ctr9Q62018 Gm11515-201ENSMUST00000150818 701 ntTSL 2 BASIC17.23■□□□□ 0.35
Ctr9Q62018 Ccnh-202ENSMUST00000163600 1055 ntTSL 5 BASIC17.23■□□□□ 0.35
Ctr9Q62018 Gm26517-201ENSMUST00000181279 1172 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Ctr9Q62018 Gm27618-201ENSMUST00000183671 60 ntBASIC17.23■□□□□ 0.35
Ctr9Q62018 Krtap19-4-201ENSMUST00000051103 304 ntAPPRIS P1 BASIC17.23■□□□□ 0.35
Ctr9Q62018 Fgfr1op2-204ENSMUST00000111663 2880 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Ctr9Q62018 Ptcd2-201ENSMUST00000022153 1704 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Ctr9Q62018 Loxl4-203ENSMUST00000164786 2617 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
Ctr9Q62018 Ydjc-203ENSMUST00000115706 3097 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Ctr9Q62018 Pld3-202ENSMUST00000117611 2297 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Ctr9Q62018 Stra8-203ENSMUST00000114999 1455 ntAPPRIS P2 TSL 1 (best) BASIC17.23■□□□□ 0.35
Ctr9Q62018 Rps3-201ENSMUST00000032998 1908 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Ctr9Q62018 Hhat-201ENSMUST00000044190 2839 ntAPPRIS P2 TSL 1 (best) BASIC17.23■□□□□ 0.35
Ctr9Q62018 Dlgap4-204ENSMUST00000109566 1595 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
Ctr9Q62018 Tmpo-201ENSMUST00000020123 3772 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Ctr9Q62018 Rufy3-205ENSMUST00000198965 3536 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Ctr9Q62018 Ube2d3-210ENSMUST00000197539 2515 ntAPPRIS P2 TSL 1 (best) BASIC17.22■□□□□ 0.35
Ctr9Q62018 Antxr1-205ENSMUST00000205033 3160 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
Ctr9Q62018 4930438A08Rik-201ENSMUST00000108834 2093 ntAPPRIS P1 TSL 5 BASIC17.22■□□□□ 0.35
Ctr9Q62018 Phospho2-202ENSMUST00000112266 2194 ntAPPRIS P1 TSL 3 BASIC17.22■□□□□ 0.35
Ctr9Q62018 Unc93b1-203ENSMUST00000162708 2266 ntAPPRIS P3 TSL 1 (best) BASIC17.22■□□□□ 0.35
Ctr9Q62018 Usp1-201ENSMUST00000030289 3577 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Ctr9Q62018 Ncf1-201ENSMUST00000016094 2763 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
Ctr9Q62018 Tdrd7-201ENSMUST00000102929 3716 ntAPPRIS P3 TSL 1 (best) BASIC17.22■□□□□ 0.35
Ctr9Q62018 Ehd4-201ENSMUST00000028755 3730 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Ctr9Q62018 Gm6539-201ENSMUST00000119157 1064 ntBASIC17.22■□□□□ 0.35
Ctr9Q62018 Gm12264-201ENSMUST00000123949 500 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Ctr9Q62018 Gm15862-201ENSMUST00000146349 361 ntTSL 2 BASIC17.22■□□□□ 0.35
Ctr9Q62018 Nfya-203ENSMUST00000159063 1255 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Ctr9Q62018 Gm38294-201ENSMUST00000192831 381 ntBASIC17.22■□□□□ 0.35
Ctr9Q62018 Timm13-203ENSMUST00000218481 471 ntTSL 3 BASIC17.22■□□□□ 0.35
Ctr9Q62018 Tmem116-202ENSMUST00000060004 1297 ntAPPRIS P3 TSL 1 (best) BASIC17.22■□□□□ 0.35
Ctr9Q62018 Atp4b-201ENSMUST00000033826 1378 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Ctr9Q62018 Elk4-201ENSMUST00000027696 1586 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Ctr9Q62018 AC174678.1-201ENSMUST00000228007 2749 ntBASIC17.22■□□□□ 0.35
Ctr9Q62018 Stk40-202ENSMUST00000116286 3860 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Ctr9Q62018 Dpp7-201ENSMUST00000028332 1682 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Ctr9Q62018 Selplg-201ENSMUST00000100874 1855 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Ctr9Q62018 Strn4-201ENSMUST00000019220 3535 ntAPPRIS P4 TSL 1 (best) BASIC17.22■□□□□ 0.35
Ctr9Q62018 Casp8-201ENSMUST00000027189 2585 ntAPPRIS P3 TSL 1 (best) BASIC17.22■□□□□ 0.35
Ctr9Q62018 Llgl1-201ENSMUST00000052346 4303 ntAPPRIS P4 TSL 1 (best) BASIC17.22■□□□□ 0.35
Ctr9Q62018 Gm26578-201ENSMUST00000181702 4611 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Ctr9Q62018 Skor1-201ENSMUST00000055281 3657 ntAPPRIS P3 TSL 1 (best) BASIC17.22■□□□□ 0.35
Ctr9Q62018 Pcp2-202ENSMUST00000128566 1447 ntAPPRIS ALT2 TSL 2 BASIC17.21■□□□□ 0.35
Ctr9Q62018 Tmem176b-203ENSMUST00000166247 1414 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Retrieved 100 of 76,532 protein–RNA pairs in 133.2 ms