Protein–RNA interactions for Protein: Q61418

Clcn4, H(+)/Cl(-) exchange transporter 4, mousemouse

Predictions only

Length 747 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clcn4Q61418 Lamp2-203ENSMUST00000074913 2184 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
Clcn4Q61418 B4galt3-202ENSMUST00000111313 2098 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Clcn4Q61418 Akap17b-201ENSMUST00000051906 6003 ntAPPRIS P1 TSL 5 BASIC13.51□□□□□ -0.25
Clcn4Q61418 Oas1a-201ENSMUST00000080322 1885 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Clcn4Q61418 Entpd5-204ENSMUST00000117286 1691 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Clcn4Q61418 Ybx1-201ENSMUST00000079644 1628 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Clcn4Q61418 Ptpn2-201ENSMUST00000025420 1568 ntAPPRIS P3 TSL 1 (best) BASIC13.51□□□□□ -0.25
Clcn4Q61418 Gm17018-201ENSMUST00000047057 1345 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Clcn4Q61418 Thap7-201ENSMUST00000100125 1248 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Clcn4Q61418 E530001F21Rik-201ENSMUST00000120991 730 ntBASIC13.51□□□□□ -0.25
Clcn4Q61418 Rpl39l-202ENSMUST00000121292 550 ntAPPRIS P1 TSL 2 BASIC13.51□□□□□ -0.25
Clcn4Q61418 Gm5682-201ENSMUST00000173402 505 ntBASIC13.51□□□□□ -0.25
Clcn4Q61418 Zfp787-206ENSMUST00000208746 535 ntTSL 2 BASIC13.51□□□□□ -0.25
Clcn4Q61418 Gchfr-201ENSMUST00000057454 645 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Clcn4Q61418 Ccdc158-203ENSMUST00000150359 3353 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Clcn4Q61418 Arhgef33-202ENSMUST00000223878 3253 ntAPPRIS P1 BASIC13.51□□□□□ -0.25
Clcn4Q61418 Arhgef33-201ENSMUST00000068175 3260 ntAPPRIS P1 TSL 5 BASIC13.51□□□□□ -0.25
Clcn4Q61418 Tcea1-202ENSMUST00000165720 2854 ntTSL 5 BASIC13.51□□□□□ -0.25
Clcn4Q61418 Cep170-205ENSMUST00000192961 2708 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Clcn4Q61418 Atp2b3-202ENSMUST00000088429 4483 ntAPPRIS P2 TSL 1 (best) BASIC13.51□□□□□ -0.25
Clcn4Q61418 Hnrnpr-202ENSMUST00000105850 2683 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Clcn4Q61418 B3gnt7-201ENSMUST00000113306 2582 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Clcn4Q61418 Pid1-207ENSMUST00000177458 2521 ntTSL 2 BASIC13.51□□□□□ -0.25
Clcn4Q61418 Pola2-201ENSMUST00000025752 2424 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Clcn4Q61418 Pcdh10-201ENSMUST00000166126 7081 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Clcn4Q61418 Pcnx3-201ENSMUST00000068169 5276 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Clcn4Q61418 Thnsl2-202ENSMUST00000160918 2077 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Clcn4Q61418 Egr1-201ENSMUST00000064795 4484 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Clcn4Q61418 Fgfr3-210ENSMUST00000169212 4245 ntAPPRIS P4 TSL 1 (best) BASIC13.5□□□□□ -0.25
Clcn4Q61418 Tmem81-202ENSMUST00000188789 1751 ntAPPRIS P1 BASIC13.5□□□□□ -0.25
Clcn4Q61418 Slc8b1-201ENSMUST00000068326 2898 ntAPPRIS P2 TSL 1 (best) BASIC13.5□□□□□ -0.25
Clcn4Q61418 Ccnj-201ENSMUST00000025983 3819 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Clcn4Q61418 Ttc9c-201ENSMUST00000088092 1585 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Clcn4Q61418 Dlk2-203ENSMUST00000166617 1528 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Clcn4Q61418 Ythdf3-203ENSMUST00000191774 3196 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Clcn4Q61418 Edn3-201ENSMUST00000029030 3117 ntAPPRIS P2 TSL 1 (best) BASIC13.5□□□□□ -0.25
Clcn4Q61418 Ptpn6-203ENSMUST00000171549 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC13.5□□□□□ -0.25
Clcn4Q61418 4921511I17Rik-201ENSMUST00000220545 1341 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Clcn4Q61418 Sp2-203ENSMUST00000107624 3055 ntAPPRIS P2 TSL 1 (best) BASIC13.5□□□□□ -0.25
Clcn4Q61418 Prnp-201ENSMUST00000091288 2184 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Clcn4Q61418 Olfr718-ps1-202ENSMUST00000213631 4737 ntAPPRIS P5 TSL 5 BASIC13.5□□□□□ -0.25
Clcn4Q61418 0610010K14Rik-204ENSMUST00000102569 778 ntAPPRIS P3 TSL 1 (best) BASIC13.5□□□□□ -0.25
Clcn4Q61418 Aig1-202ENSMUST00000105534 617 ntTSL 5 BASIC13.5□□□□□ -0.25
Clcn4Q61418 2200002J24Rik-201ENSMUST00000013227 333 ntAPPRIS P1 TSL 3 BASIC13.5□□□□□ -0.25
Clcn4Q61418 Dbi-207ENSMUST00000151708 491 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Clcn4Q61418 Gm25925-201ENSMUST00000158314 306 ntBASIC13.5□□□□□ -0.25
Clcn4Q61418 Tbc1d7-202ENSMUST00000179852 1246 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Clcn4Q61418 Gm27702-201ENSMUST00000184512 56 ntBASIC13.5□□□□□ -0.25
Clcn4Q61418 AC084391.1-201ENSMUST00000200651 141 ntBASIC13.5□□□□□ -0.25
Clcn4Q61418 1700021F07Rik-201ENSMUST00000029023 646 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Clcn4Q61418 Mrpl46-201ENSMUST00000032841 1134 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Clcn4Q61418 Rpl8-201ENSMUST00000004072 862 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Clcn4Q61418 Gsdmcl1-201ENSMUST00000071847 1133 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Clcn4Q61418 Krtap19-3-201ENSMUST00000075284 526 ntAPPRIS P1 BASIC13.5□□□□□ -0.25
Clcn4Q61418 Sema4b-204ENSMUST00000205822 3760 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Clcn4Q61418 Evx1os-201ENSMUST00000125305 2916 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Clcn4Q61418 Wbscr25-202ENSMUST00000148729 2075 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Clcn4Q61418 N6amt1-202ENSMUST00000118115 1951 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Clcn4Q61418 Mtfr2-201ENSMUST00000169712 1991 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Clcn4Q61418 Lysmd3-202ENSMUST00000224300 4250 ntAPPRIS P1 BASIC13.5□□□□□ -0.25
Clcn4Q61418 Hic1-201ENSMUST00000055619 3497 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Clcn4Q61418 Pom121l2-202ENSMUST00000117882 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC13.5□□□□□ -0.25
Clcn4Q61418 Itgb3-201ENSMUST00000021028 5784 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Clcn4Q61418 Adrb3-203ENSMUST00000121838 1864 ntAPPRIS P2 TSL 1 (best) BASIC13.5□□□□□ -0.25
Clcn4Q61418 Satb2-201ENSMUST00000042857 6277 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Clcn4Q61418 Gm5478-201ENSMUST00000100184 2566 ntAPPRIS P1 TSL 5 BASIC13.5□□□□□ -0.25
Clcn4Q61418 Vps26a-202ENSMUST00000105447 2597 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Clcn4Q61418 Abcf2-201ENSMUST00000030795 2569 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Clcn4Q61418 9330182L06Rik-201ENSMUST00000069538 4688 ntAPPRIS P2 TSL 1 (best) BASIC13.5□□□□□ -0.25
Clcn4Q61418 Dlg4-201ENSMUST00000018700 3204 ntAPPRIS P3 TSL 1 (best) BASIC13.5□□□□□ -0.25
Clcn4Q61418 Adal-201ENSMUST00000028702 2471 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Clcn4Q61418 Csdc2-201ENSMUST00000038757 2490 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Clcn4Q61418 Rims1-201ENSMUST00000081544 5954 ntAPPRIS ALT2 TSL 5 BASIC13.5□□□□□ -0.25
Clcn4Q61418 Pex5-201ENSMUST00000035861 3139 ntAPPRIS P4 TSL 1 (best) BASIC13.5□□□□□ -0.25
Clcn4Q61418 Otop3-202ENSMUST00000106543 2369 ntAPPRIS ALT2 TSL 1 (best) BASIC13.5□□□□□ -0.25
Clcn4Q61418 Aire-213ENSMUST00000148469 1618 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Clcn4Q61418 Usp33-201ENSMUST00000026507 4153 ntAPPRIS ALT2 TSL 1 (best) BASIC13.5□□□□□ -0.25
Clcn4Q61418 Elf4-202ENSMUST00000114958 6088 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Clcn4Q61418 Asb10-203ENSMUST00000119657 1536 ntTSL 5 BASIC13.49□□□□□ -0.25
Clcn4Q61418 Cadps2-213ENSMUST00000166458 4598 ntAPPRIS ALT2 TSL 5 BASIC13.49□□□□□ -0.25
Clcn4Q61418 4930558J18Rik-201ENSMUST00000181949 2052 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Clcn4Q61418 Nrip2-202ENSMUST00000120405 1468 ntTSL 2 BASIC13.49□□□□□ -0.25
Clcn4Q61418 Pxylp1-204ENSMUST00000120101 3189 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Clcn4Q61418 Las1l-202ENSMUST00000113864 2581 ntAPPRIS ALT2 TSL 5 BASIC13.49□□□□□ -0.25
Clcn4Q61418 Pcsk6-202ENSMUST00000098391 4207 ntAPPRIS ALT2 TSL 1 (best) BASIC13.49□□□□□ -0.25
Clcn4Q61418 Cybrd1-201ENSMUST00000028403 5339 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Clcn4Q61418 Syt1-201ENSMUST00000064054 4745 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Clcn4Q61418 Mcf2l-207ENSMUST00000110876 5253 ntAPPRIS P2 TSL 1 (best) BASIC13.49□□□□□ -0.25
Clcn4Q61418 Eva1c-203ENSMUST00000099548 1948 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Clcn4Q61418 Gm26840-201ENSMUST00000180784 2980 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Clcn4Q61418 Zyg11b-201ENSMUST00000043616 8691 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Clcn4Q61418 Atf7-202ENSMUST00000108828 2887 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Clcn4Q61418 Actg1-204ENSMUST00000106215 1827 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Clcn4Q61418 Phldb1-214ENSMUST00000147495 5424 ntAPPRIS P5 TSL 5 BASIC13.49□□□□□ -0.25
Clcn4Q61418 Vps53-201ENSMUST00000056601 2833 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Clcn4Q61418 Gm996-201ENSMUST00000114217 4881 ntAPPRIS P1 TSL 2 BASIC13.49□□□□□ -0.25
Clcn4Q61418 Gm13830-202ENSMUST00000144202 381 ntTSL 3 BASIC13.49□□□□□ -0.25
Clcn4Q61418 Psmb1-201ENSMUST00000014913 1036 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Clcn4Q61418 1700108N11Rik-201ENSMUST00000153051 917 ntTSL 2 BASIC13.49□□□□□ -0.25
Clcn4Q61418 Psma6-204ENSMUST00000163070 787 ntTSL 5 BASIC13.49□□□□□ -0.25
Retrieved 100 of 76,532 protein–RNA pairs in 29.2 ms