Protein–RNA interactions for Protein: Q61371

Ift88, Intraflagellar transport protein 88 homolog, mousemouse

Predictions only

Length 824 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ift88Q61371 Rsbn1l-201ENSMUST00000036489 5550 ntAPPRIS P2 TSL 5 BASIC16.22■□□□□ 0.19
Ift88Q61371 Gm10110-201ENSMUST00000081204 1891 ntTSL 5 BASIC16.22■□□□□ 0.19
Ift88Q61371 Isoc2a-201ENSMUST00000125249 2244 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Ift88Q61371 Kirrel-202ENSMUST00000107618 7278 ntAPPRIS P2 TSL 5 BASIC16.22■□□□□ 0.19
Ift88Q61371 Ank1-208ENSMUST00000121075 1740 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
Ift88Q61371 Srgn-204ENSMUST00000160987 1727 ntAPPRIS P1 TSL 3 BASIC16.22■□□□□ 0.19
Ift88Q61371 Rtkn-202ENSMUST00000087938 3080 ntAPPRIS P3 TSL 1 (best) BASIC16.22■□□□□ 0.19
Ift88Q61371 Gm10489-201ENSMUST00000180511 1466 ntTSL 2 BASIC16.22■□□□□ 0.19
Ift88Q61371 Pafah1b1-202ENSMUST00000102520 5789 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Ift88Q61371 1500011B03Rik-202ENSMUST00000112160 1333 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.19
Ift88Q61371 Gm5105-201ENSMUST00000053318 1665 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Ift88Q61371 Usp33-201ENSMUST00000026507 4153 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.19
Ift88Q61371 Coro6-201ENSMUST00000021190 1418 ntAPPRIS P5 TSL 1 (best) BASIC16.21■□□□□ 0.19
Ift88Q61371 Gm14451-201ENSMUST00000121581 1542 ntBASIC16.21■□□□□ 0.19
Ift88Q61371 Acr-201ENSMUST00000023295 1504 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Ift88Q61371 Osbpl10-201ENSMUST00000046627 1872 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
Ift88Q61371 Col9a2-201ENSMUST00000030372 2924 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Ift88Q61371 Scube1-205ENSMUST00000171496 7824 ntAPPRIS P3 TSL 5 BASIC16.21■□□□□ 0.19
Ift88Q61371 Slc25a34-201ENSMUST00000038661 2670 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Ift88Q61371 Il11ra2-201ENSMUST00000108006 1299 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Ift88Q61371 Ndufb6-202ENSMUST00000108108 480 ntTSL 3 BASIC16.21■□□□□ 0.19
Ift88Q61371 Gm9726-201ENSMUST00000180321 678 ntBASIC16.21■□□□□ 0.19
Ift88Q61371 Gm44930-202ENSMUST00000208733 689 ntTSL 5 BASIC16.21■□□□□ 0.19
Ift88Q61371 Hmgb1-rs17-201ENSMUST00000210634 972 ntBASIC16.21■□□□□ 0.19
Ift88Q61371 Batf-201ENSMUST00000040536 955 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Ift88Q61371 Ttyh2-201ENSMUST00000045779 3486 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Ift88Q61371 Mcc-202ENSMUST00000164666 3606 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
Ift88Q61371 Tspan15-201ENSMUST00000047883 3638 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Ift88Q61371 Piezo1-209ENSMUST00000156333 8219 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.18
Ift88Q61371 Piezo1-201ENSMUST00000067252 8216 ntAPPRIS P2 TSL 5 BASIC16.21■□□□□ 0.18
Ift88Q61371 Pid1-204ENSMUST00000176559 1564 ntTSL 2 BASIC16.21■□□□□ 0.18
Ift88Q61371 Cald1-201ENSMUST00000031775 2142 ntAPPRIS ALT2 TSL 5 BASIC16.21■□□□□ 0.18
Ift88Q61371 Slc39a3-202ENSMUST00000117276 3796 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
Ift88Q61371 Slfnl1-201ENSMUST00000062990 1762 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
Ift88Q61371 Gm5366-201ENSMUST00000215494 1338 ntBASIC16.2■□□□□ 0.18
Ift88Q61371 Apbb1-215ENSMUST00000190369 1882 ntTSL 5 BASIC16.2■□□□□ 0.18
Ift88Q61371 Fbrs-202ENSMUST00000205432 4166 ntAPPRIS ALT2 TSL 5 BASIC16.2■□□□□ 0.18
Ift88Q61371 Gm8909-203ENSMUST00000173353 1428 ntAPPRIS ALT2 TSL 5 BASIC16.2■□□□□ 0.18
Ift88Q61371 Lysmd3-202ENSMUST00000224300 4250 ntAPPRIS P1 BASIC16.2■□□□□ 0.18
Ift88Q61371 Rbm33-202ENSMUST00000059644 9510 ntAPPRIS P2 TSL 5 BASIC16.2■□□□□ 0.18
Ift88Q61371 Fbln7-201ENSMUST00000028864 2905 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Ift88Q61371 Sugp2-214ENSMUST00000164403 4099 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Ift88Q61371 Cyp2u1-201ENSMUST00000106337 4378 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Ift88Q61371 Atp2b3-202ENSMUST00000088429 4483 ntAPPRIS P2 TSL 1 (best) BASIC16.2■□□□□ 0.18
Ift88Q61371 Cops9-202ENSMUST00000112999 653 ntTSL 3 BASIC16.2■□□□□ 0.18
Ift88Q61371 Zglp1-201ENSMUST00000115494 1010 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Ift88Q61371 Gm8749-201ENSMUST00000117737 331 ntBASIC16.2■□□□□ 0.18
Ift88Q61371 Slc38a6-204ENSMUST00000126488 589 ntTSL 5 BASIC16.2■□□□□ 0.18
Ift88Q61371 1810062O18Rik-203ENSMUST00000129237 647 ntTSL 5 BASIC16.2■□□□□ 0.18
Ift88Q61371 Znhit1-206ENSMUST00000156963 1208 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Ift88Q61371 Sod1-201ENSMUST00000023707 646 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Ift88Q61371 Itsn1-202ENSMUST00000064797 7418 ntAPPRIS ALT2 TSL 5 BASIC16.2■□□□□ 0.18
Ift88Q61371 Epha1-201ENSMUST00000073387 3273 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Ift88Q61371 Fancm-201ENSMUST00000058889 7775 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Ift88Q61371 Rusc1-202ENSMUST00000090929 3706 ntAPPRIS P4 TSL 1 (best) BASIC16.2■□□□□ 0.18
Ift88Q61371 Sema6b-202ENSMUST00000167545 3847 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Ift88Q61371 Aifm3-202ENSMUST00000115685 2357 ntAPPRIS ALT1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Ift88Q61371 Rnf123-214ENSMUST00000162355 4727 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
Ift88Q61371 Serinc1-201ENSMUST00000020027 2880 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Ift88Q61371 Gm44291-201ENSMUST00000203102 2865 ntBASIC16.2■□□□□ 0.18
Ift88Q61371 Ctu2-201ENSMUST00000116412 3066 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Ift88Q61371 Eif2d-202ENSMUST00000068805 2009 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
Ift88Q61371 9330020H09Rik-201ENSMUST00000163781 2147 ntTSL 2 BASIC16.19■□□□□ 0.18
Ift88Q61371 Slc43a1-201ENSMUST00000028469 2539 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
Ift88Q61371 1700029J07Rik-201ENSMUST00000095323 2740 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Ift88Q61371 Rcbtb1-202ENSMUST00000043227 3903 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Ift88Q61371 Fbxo41-201ENSMUST00000159062 6505 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Ift88Q61371 Poli-202ENSMUST00000121674 2778 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Ift88Q61371 Gm43399-201ENSMUST00000202546 2374 ntBASIC16.19■□□□□ 0.18
Ift88Q61371 Bet1l-201ENSMUST00000026557 2268 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Ift88Q61371 Kcnj8-201ENSMUST00000032374 2269 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Ift88Q61371 Ptprs-202ENSMUST00000086828 5608 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Ift88Q61371 Ntng2-204ENSMUST00000102873 1593 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
Ift88Q61371 Grtp1-201ENSMUST00000165605 1271 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Ift88Q61371 Gm20680-201ENSMUST00000176881 789 ntTSL 5 BASIC16.19■□□□□ 0.18
Ift88Q61371 1500015A07Rik-203ENSMUST00000184678 890 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Ift88Q61371 1810008I18Rik-202ENSMUST00000187848 819 ntTSL 3 BASIC16.19■□□□□ 0.18
Ift88Q61371 5033428I22Rik-203ENSMUST00000210614 952 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Ift88Q61371 Lrr1-203ENSMUST00000222520 767 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Ift88Q61371 Cklf-201ENSMUST00000034342 667 ntAPPRIS P4 TSL 1 (best) BASIC16.19■□□□□ 0.18
Ift88Q61371 Fgfr1op2-201ENSMUST00000037836 687 ntTSL 3 BASIC16.19■□□□□ 0.18
Ift88Q61371 Ly6d-201ENSMUST00000040404 744 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Ift88Q61371 Ndufs8-201ENSMUST00000075092 963 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Ift88Q61371 Paox-202ENSMUST00000097967 1024 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Ift88Q61371 Tbc1d4-210ENSMUST00000162617 4762 ntAPPRIS ALT2 TSL 5 BASIC16.19■□□□□ 0.18
Ift88Q61371 Spg20-201ENSMUST00000044116 3770 ntAPPRIS P3 TSL 1 (best) BASIC16.19■□□□□ 0.18
Ift88Q61371 D6Ertd527e-204ENSMUST00000204927 2218 ntAPPRIS P3 TSL 1 (best) BASIC16.19■□□□□ 0.18
Ift88Q61371 Prkcsh-205ENSMUST00000216344 2228 ntAPPRIS P3 TSL 1 (best) BASIC16.19■□□□□ 0.18
Ift88Q61371 Rasl12-202ENSMUST00000165682 1903 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Ift88Q61371 Lzts1-201ENSMUST00000037049 1800 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Ift88Q61371 Gpr137c-201ENSMUST00000146150 3917 ntAPPRIS P2 TSL 5 BASIC16.19■□□□□ 0.18
Ift88Q61371 Pex12-202ENSMUST00000108146 2389 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Ift88Q61371 Upk1a-201ENSMUST00000006476 1421 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Ift88Q61371 Ptk2-202ENSMUST00000170939 3598 ntTSL 2 BASIC16.18■□□□□ 0.18
Ift88Q61371 Ntng2-201ENSMUST00000048455 1770 ntAPPRIS P4 TSL 1 (best) BASIC16.18■□□□□ 0.18
Ift88Q61371 Marveld3-202ENSMUST00000051430 2447 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Ift88Q61371 Zdhhc7-201ENSMUST00000034280 3069 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Ift88Q61371 Gnpda2-202ENSMUST00000120789 1594 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Ift88Q61371 Myh14-201ENSMUST00000048102 6457 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
Ift88Q61371 Pglyrp2-201ENSMUST00000114455 1915 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Retrieved 100 of 76,532 protein–RNA pairs in 36.9 ms