Protein–RNA interactions for Protein: Q61189

Clns1a, Methylosome subunit pICln, mousemouse

Predictions only

Length 236 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clns1aQ61189 Nos1ap-202ENSMUST00000160456 3022 ntAPPRIS P2 TSL 5 BASIC12.54□□□□□ -0.4
Clns1aQ61189 Adat3-201ENSMUST00000178231 4516 ntAPPRIS P1 TSL 2 BASIC12.54□□□□□ -0.4
Clns1aQ61189 Mpp3-201ENSMUST00000062801 2848 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Clns1aQ61189 Camk2d-202ENSMUST00000066466 4075 ntAPPRIS ALT1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Clns1aQ61189 Gbe1-207ENSMUST00000171132 3303 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Clns1aQ61189 Ccdc92b-201ENSMUST00000100866 4002 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Clns1aQ61189 CT030684.3-201ENSMUST00000227308 2445 ntBASIC12.53□□□□□ -0.4
Clns1aQ61189 B3gnt3-201ENSMUST00000034260 3055 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Clns1aQ61189 Wnt3a-201ENSMUST00000010044 2761 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Clns1aQ61189 Gnb2-203ENSMUST00000111023 1471 ntTSL 5 BASIC12.53□□□□□ -0.4
Clns1aQ61189 Gm13285-201ENSMUST00000179725 1462 ntAPPRIS P1 BASIC12.53□□□□□ -0.4
Clns1aQ61189 Hif3a-202ENSMUST00000108492 6402 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Clns1aQ61189 Sgce-202ENSMUST00000090686 1547 ntTSL 5 BASIC12.53□□□□□ -0.4
Clns1aQ61189 Magi1-206ENSMUST00000203688 4969 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Clns1aQ61189 A930033H14Rik-201ENSMUST00000170048 2969 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Clns1aQ61189 Nphp1-201ENSMUST00000028857 2260 ntAPPRIS P3 TSL 1 (best) BASIC12.53□□□□□ -0.4
Clns1aQ61189 Iqcd-201ENSMUST00000069259 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Clns1aQ61189 Ptpru-203ENSMUST00000105987 5484 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Clns1aQ61189 Sphk1-205ENSMUST00000106387 1957 ntAPPRIS ALT2 TSL 5 BASIC12.53□□□□□ -0.4
Clns1aQ61189 Irak1-206ENSMUST00000114354 3835 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Clns1aQ61189 Tpt1-ps6-201ENSMUST00000121768 523 ntBASIC12.53□□□□□ -0.4
Clns1aQ61189 2210408F21Rik-213ENSMUST00000153057 652 ntTSL 3 BASIC12.53□□□□□ -0.4
Clns1aQ61189 Prr23a1-201ENSMUST00000170349 883 ntAPPRIS P1 BASIC12.53□□□□□ -0.4
Clns1aQ61189 Gm38282-201ENSMUST00000192751 695 ntTSL 5 BASIC12.53□□□□□ -0.4
Clns1aQ61189 Gm26709-203ENSMUST00000223260 715 ntTSL 5 BASIC12.53□□□□□ -0.4
Clns1aQ61189 Limd2-202ENSMUST00000064545 798 ntAPPRIS P1 TSL 2 BASIC12.53□□□□□ -0.4
Clns1aQ61189 Gm43056-201ENSMUST00000197865 2791 ntBASIC12.53□□□□□ -0.4
Clns1aQ61189 Pak1-205ENSMUST00000206984 2794 ntAPPRIS P1 TSL 5 BASIC12.53□□□□□ -0.4
Clns1aQ61189 Armc8-201ENSMUST00000035043 4647 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Clns1aQ61189 Scarb2-201ENSMUST00000031377 4698 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Clns1aQ61189 Chaf1a-201ENSMUST00000002914 3308 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Clns1aQ61189 Tubg1-201ENSMUST00000043680 1802 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Clns1aQ61189 Zfp689-202ENSMUST00000106299 1417 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Clns1aQ61189 Nbeal2-210ENSMUST00000167320 8803 ntAPPRIS P2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Clns1aQ61189 Rabggta-202ENSMUST00000163889 1886 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Clns1aQ61189 Cacna2d1-202ENSMUST00000078272 7311 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Clns1aQ61189 AC157650.3-201ENSMUST00000225058 1476 ntBASIC12.53□□□□□ -0.4
Clns1aQ61189 Trabd2b-201ENSMUST00000094894 6617 ntAPPRIS P1 TSL 5 BASIC12.52□□□□□ -0.4
Clns1aQ61189 Vldlr-207ENSMUST00000167487 7971 ntAPPRIS P3 TSL 1 (best) BASIC12.52□□□□□ -0.4
Clns1aQ61189 Gm7901-201ENSMUST00000120430 1597 ntBASIC12.52□□□□□ -0.4
Clns1aQ61189 Adcyap1r1-202ENSMUST00000070756 6107 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.4
Clns1aQ61189 Lrp8os2-204ENSMUST00000188737 3078 ntTSL 1 (best) BASIC12.52□□□□□ -0.4
Clns1aQ61189 Gng4-201ENSMUST00000021734 3179 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Clns1aQ61189 Spg20-201ENSMUST00000044116 3770 ntAPPRIS P3 TSL 1 (best) BASIC12.52□□□□□ -0.41
Clns1aQ61189 Gm6433-201ENSMUST00000118634 875 ntBASIC12.52□□□□□ -0.41
Clns1aQ61189 Zfp125-202ENSMUST00000144811 704 ntTSL 5 BASIC12.52□□□□□ -0.41
Clns1aQ61189 Flt3l-206ENSMUST00000210197 834 ntAPPRIS ALT2 TSL 5 BASIC12.52□□□□□ -0.41
Clns1aQ61189 Gm18032-201ENSMUST00000222541 538 ntBASIC12.52□□□□□ -0.41
Clns1aQ61189 Ccdc182-201ENSMUST00000037268 1204 ntAPPRIS P1 BASIC12.52□□□□□ -0.41
Clns1aQ61189 Prima1-201ENSMUST00000074416 909 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Clns1aQ61189 Tbpl1-201ENSMUST00000095794 1195 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Clns1aQ61189 Ppp1r15a-202ENSMUST00000167273 2809 ntAPPRIS P1 TSL 2 BASIC12.52□□□□□ -0.41
Clns1aQ61189 AC166491.1-201ENSMUST00000227053 2308 ntBASIC12.52□□□□□ -0.41
Clns1aQ61189 Six3os1-211ENSMUST00000176958 2889 ntTSL 2 BASIC12.52□□□□□ -0.41
Clns1aQ61189 Lrig2-205ENSMUST00000198332 3946 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.41
Clns1aQ61189 Lrrc8d-201ENSMUST00000060531 3923 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Clns1aQ61189 Plcxd1-201ENSMUST00000086687 1346 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Clns1aQ61189 Cdkn2aip-201ENSMUST00000038738 3464 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.41
Clns1aQ61189 Gm2788-202ENSMUST00000147173 1390 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Clns1aQ61189 Rubcn-203ENSMUST00000115105 5255 ntAPPRIS ALT2 TSL 5 BASIC12.52□□□□□ -0.41
Clns1aQ61189 Tmem218-201ENSMUST00000034632 2619 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Clns1aQ61189 Gm6297-201ENSMUST00000181475 2146 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Clns1aQ61189 Psmd8-203ENSMUST00000186182 1512 ntAPPRIS P2 TSL 1 (best) BASIC12.52□□□□□ -0.41
Clns1aQ61189 Cfap69-205ENSMUST00000135252 2188 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.41
Clns1aQ61189 Rinl-206ENSMUST00000209035 2898 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Clns1aQ61189 Dnajb12-205ENSMUST00000147914 3041 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
Clns1aQ61189 Kcnj3-201ENSMUST00000067101 5215 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Clns1aQ61189 Adamts7-208ENSMUST00000167122 5338 ntAPPRIS ALT2 TSL 5 BASIC12.51□□□□□ -0.41
Clns1aQ61189 Nfat5-201ENSMUST00000075922 4619 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
Clns1aQ61189 Klhl32-204ENSMUST00000108218 7143 ntAPPRIS P1 TSL 5 BASIC12.51□□□□□ -0.41
Clns1aQ61189 Dpp3-201ENSMUST00000025851 2683 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Clns1aQ61189 Fgfr1-201ENSMUST00000084027 5025 ntAPPRIS P3 TSL 5 BASIC12.51□□□□□ -0.41
Clns1aQ61189 Tle3-204ENSMUST00000159386 4527 ntAPPRIS ALT2 TSL 5 BASIC12.51□□□□□ -0.41
Clns1aQ61189 Gmcl1-202ENSMUST00000113679 960 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Clns1aQ61189 Tmem80-202ENSMUST00000126510 959 ntAPPRIS P1 TSL 5 BASIC12.51□□□□□ -0.41
Clns1aQ61189 Mir6982-201ENSMUST00000184354 68 ntBASIC12.51□□□□□ -0.41
Clns1aQ61189 Dnmt3a-ps1-201ENSMUST00000192011 1271 ntBASIC12.51□□□□□ -0.41
Clns1aQ61189 Ighv6-1-201ENSMUST00000193612 343 ntBASIC12.51□□□□□ -0.41
Clns1aQ61189 Gm5587-201ENSMUST00000206270 674 ntBASIC12.51□□□□□ -0.41
Clns1aQ61189 1700012D14Rik-201ENSMUST00000209597 605 ntTSL 3 BASIC12.51□□□□□ -0.41
Clns1aQ61189 AC153881.2-201ENSMUST00000214877 204 ntBASIC12.51□□□□□ -0.41
Clns1aQ61189 AC122024.2-201ENSMUST00000220086 871 ntBASIC12.51□□□□□ -0.41
Clns1aQ61189 Aqp12-201ENSMUST00000059676 1088 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Clns1aQ61189 Bid-201ENSMUST00000004560 2189 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Clns1aQ61189 Arhgap10-201ENSMUST00000076316 3084 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Clns1aQ61189 Vamp2-201ENSMUST00000021273 2205 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Clns1aQ61189 Fkbp10-202ENSMUST00000107400 1467 ntTSL 5 BASIC12.51□□□□□ -0.41
Clns1aQ61189 Zfp236-201ENSMUST00000171071 9626 ntAPPRIS P2 TSL 1 (best) BASIC12.51□□□□□ -0.41
Clns1aQ61189 Ints7-201ENSMUST00000045450 5347 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Clns1aQ61189 Itga6-202ENSMUST00000112101 4156 ntAPPRIS ALT1 TSL 5 BASIC12.51□□□□□ -0.41
Clns1aQ61189 Adra1b-204ENSMUST00000167574 3047 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Clns1aQ61189 Echdc1-202ENSMUST00000160399 1845 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Clns1aQ61189 4930429H19Rik-201ENSMUST00000205260 1818 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Clns1aQ61189 Prkacb-202ENSMUST00000102515 4347 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Clns1aQ61189 Adad1-203ENSMUST00000144629 3101 ntAPPRIS P2 TSL 1 (best) BASIC12.51□□□□□ -0.41
Clns1aQ61189 Gm42471-201ENSMUST00000201457 1865 ntBASIC12.51□□□□□ -0.41
Clns1aQ61189 Rhpn1-201ENSMUST00000023244 1932 ntAPPRIS P3 TSL 1 (best) BASIC12.5□□□□□ -0.41
Clns1aQ61189 Olfr56-201ENSMUST00000056759 1925 ntTSL 5 BASIC12.5□□□□□ -0.41
Clns1aQ61189 Klhl34-201ENSMUST00000087157 1935 ntAPPRIS P1 BASIC12.5□□□□□ -0.41
Clns1aQ61189 Grm5-204ENSMUST00000155358 4500 ntAPPRIS ALT2 TSL 1 (best) BASIC12.5□□□□□ -0.41
Retrieved 100 of 76,532 protein–RNA pairs in 28.7 ms