Protein–RNA interactions for Protein: Q61180

Scnn1a, Amiloride-sensitive sodium channel subunit alpha, mousemouse

Predictions only

Length 699 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scnn1aQ61180 Actr3-202ENSMUST00000178474 2565 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Scnn1aQ61180 Aldh1b1-201ENSMUST00000044384 2298 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Scnn1aQ61180 Paxbp1-202ENSMUST00000118522 3973 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Scnn1aQ61180 Kmt5b-213ENSMUST00000176262 3933 ntAPPRIS P3 TSL 5 BASIC16.78■□□□□ 0.28
Scnn1aQ61180 Nrg2-203ENSMUST00000115713 3001 ntAPPRIS P1 TSL 5 BASIC16.78■□□□□ 0.28
Scnn1aQ61180 Art3-205ENSMUST00000120193 1371 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
Scnn1aQ61180 0610009E02Rik-201ENSMUST00000133463 1609 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Scnn1aQ61180 Cant1-202ENSMUST00000092378 2995 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Scnn1aQ61180 Nes-201ENSMUST00000090973 6126 ntAPPRIS P2 TSL 1 (best) BASIC16.78■□□□□ 0.28
Scnn1aQ61180 Xpo6-201ENSMUST00000009344 4455 ntAPPRIS P3 TSL 1 (best) BASIC16.78■□□□□ 0.28
Scnn1aQ61180 Acap3-202ENSMUST00000105584 4365 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Scnn1aQ61180 Zfp202-203ENSMUST00000168832 3329 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Scnn1aQ61180 Gm7820-201ENSMUST00000121012 1052 ntBASIC16.78■□□□□ 0.28
Scnn1aQ61180 Snhg17-201ENSMUST00000133449 933 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Scnn1aQ61180 Mecp2-204ENSMUST00000140399 1168 ntTSL 5 BASIC16.78■□□□□ 0.28
Scnn1aQ61180 AC121598.1-201ENSMUST00000228224 1019 ntBASIC16.78■□□□□ 0.28
Scnn1aQ61180 Aip-201ENSMUST00000025767 1261 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Scnn1aQ61180 Rhbdl2-201ENSMUST00000053202 1217 ntAPPRIS P1 TSL 5 BASIC16.78■□□□□ 0.28
Scnn1aQ61180 mt-Rnr1-201ENSMUST00000082388 955 ntBASIC16.78■□□□□ 0.28
Scnn1aQ61180 Cldn13-201ENSMUST00000008987 1067 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Scnn1aQ61180 Gm5763-201ENSMUST00000155951 1530 ntBASIC16.78■□□□□ 0.28
Scnn1aQ61180 Brd3-203ENSMUST00000113941 5289 ntAPPRIS ALT2 TSL 5 BASIC16.78■□□□□ 0.28
Scnn1aQ61180 Gm10406-202ENSMUST00000170738 1955 ntAPPRIS P1 TSL 5 BASIC16.78■□□□□ 0.28
Scnn1aQ61180 Pbk-201ENSMUST00000022612 1720 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Scnn1aQ61180 Nbea-201ENSMUST00000029374 10986 ntAPPRIS P1 TSL 5 BASIC16.78■□□□□ 0.28
Scnn1aQ61180 Il18r1-203ENSMUST00000167723 1919 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Scnn1aQ61180 Fbxw11-203ENSMUST00000109366 3821 ntAPPRIS ALT1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Scnn1aQ61180 Gm26560-201ENSMUST00000181240 2619 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Scnn1aQ61180 Rhoj-202ENSMUST00000118602 2396 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Scnn1aQ61180 Faf1-201ENSMUST00000102724 4468 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Scnn1aQ61180 AC174678.1-201ENSMUST00000228007 2749 ntBASIC16.77■□□□□ 0.28
Scnn1aQ61180 Smarcd1-201ENSMUST00000023759 3153 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Scnn1aQ61180 Hyou1-204ENSMUST00000160902 3374 ntAPPRIS P1 TSL 5 BASIC16.77■□□□□ 0.28
Scnn1aQ61180 Gbgt1-203ENSMUST00000163121 1335 ntAPPRIS P1 TSL 5 BASIC16.77■□□□□ 0.28
Scnn1aQ61180 Unc93b1-204ENSMUST00000165711 1991 ntAPPRIS ALT2 TSL 5 BASIC16.77■□□□□ 0.28
Scnn1aQ61180 Scyl1-201ENSMUST00000025890 2637 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Scnn1aQ61180 Mthfsd-202ENSMUST00000116415 1520 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.28
Scnn1aQ61180 Tmem269-202ENSMUST00000212054 1504 ntAPPRIS P2 TSL 1 (best) BASIC16.77■□□□□ 0.28
Scnn1aQ61180 Phospho2-202ENSMUST00000112266 2194 ntAPPRIS P1 TSL 3 BASIC16.77■□□□□ 0.28
Scnn1aQ61180 Bhlhb9-201ENSMUST00000068755 2823 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Scnn1aQ61180 Pdk1-201ENSMUST00000006669 5185 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Scnn1aQ61180 Ifitm10-201ENSMUST00000059223 3412 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
Scnn1aQ61180 Ghr-203ENSMUST00000110698 1171 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
Scnn1aQ61180 Apoo-203ENSMUST00000113897 1218 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
Scnn1aQ61180 Gm13323-201ENSMUST00000120245 1151 ntBASIC16.77■□□□□ 0.28
Scnn1aQ61180 Atcayos-202ENSMUST00000129950 1117 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
Scnn1aQ61180 Rpl34-203ENSMUST00000133802 711 ntTSL 2 BASIC16.77■□□□□ 0.28
Scnn1aQ61180 Gm29667-201ENSMUST00000190817 490 ntBASIC16.77■□□□□ 0.28
Scnn1aQ61180 Gm34866-201ENSMUST00000196146 515 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
Scnn1aQ61180 AI467606-202ENSMUST00000206102 832 ntAPPRIS P1 TSL 5 BASIC16.77■□□□□ 0.28
Scnn1aQ61180 Mcm9-201ENSMUST00000075540 4882 ntAPPRIS P1 TSL 2 BASIC16.77■□□□□ 0.28
Scnn1aQ61180 4930429P21Rik-202ENSMUST00000194547 2061 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
Scnn1aQ61180 Ralb-201ENSMUST00000004565 2289 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
Scnn1aQ61180 Coro1c-201ENSMUST00000004646 3491 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
Scnn1aQ61180 Psmc3-202ENSMUST00000067663 1636 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
Scnn1aQ61180 Ece2-204ENSMUST00000133344 3042 ntAPPRIS ALT1 TSL 1 (best) BASIC16.77■□□□□ 0.27
Scnn1aQ61180 Tle3-218ENSMUST00000178113 5205 ntTSL 5 BASIC16.77■□□□□ 0.27
Scnn1aQ61180 Trim3-205ENSMUST00000147044 2972 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
Scnn1aQ61180 Sphk1-205ENSMUST00000106387 1957 ntAPPRIS ALT2 TSL 5 BASIC16.77■□□□□ 0.27
Scnn1aQ61180 Hars-201ENSMUST00000001416 1987 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
Scnn1aQ61180 Npnt-206ENSMUST00000117811 4532 ntAPPRIS ALT2 TSL 5 BASIC16.77■□□□□ 0.27
Scnn1aQ61180 Islr2-202ENSMUST00000163200 4123 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.27
Scnn1aQ61180 Ydjc-203ENSMUST00000115706 3097 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Scnn1aQ61180 P2ry2-206ENSMUST00000208340 2693 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Scnn1aQ61180 Gm26882-201ENSMUST00000181611 1537 ntTSL 5 BASIC16.76■□□□□ 0.27
Scnn1aQ61180 Eda-207ENSMUST00000113780 4915 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Scnn1aQ61180 Eda-208ENSMUST00000113781 4915 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Scnn1aQ61180 Gm6263-201ENSMUST00000120029 1342 ntBASIC16.76■□□□□ 0.27
Scnn1aQ61180 Mvp-202ENSMUST00000165096 2837 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Scnn1aQ61180 Adamts19-201ENSMUST00000052907 4666 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Scnn1aQ61180 Clcc1-201ENSMUST00000029483 2224 ntAPPRIS P3 TSL 5 BASIC16.76■□□□□ 0.27
Scnn1aQ61180 Ugcg-201ENSMUST00000030074 4012 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Scnn1aQ61180 Elovl1-201ENSMUST00000006557 1811 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Scnn1aQ61180 Gm7488-201ENSMUST00000117148 684 ntBASIC16.76■□□□□ 0.27
Scnn1aQ61180 Crybb3-205ENSMUST00000120506 804 ntAPPRIS P1 TSL 3 BASIC16.76■□□□□ 0.27
Scnn1aQ61180 Tmem262-201ENSMUST00000143303 545 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Scnn1aQ61180 Pfdn6-204ENSMUST00000174048 560 ntAPPRIS P1 TSL 2 BASIC16.76■□□□□ 0.27
Scnn1aQ61180 Six3os1-205ENSMUST00000175913 791 ntTSL 3 BASIC16.76■□□□□ 0.27
Scnn1aQ61180 Gm44855-201ENSMUST00000205725 362 ntBASIC16.76■□□□□ 0.27
Scnn1aQ61180 Gm45785-201ENSMUST00000209690 988 ntAPPRIS P1 TSL 5 BASIC16.76■□□□□ 0.27
Scnn1aQ61180 Gm26953-206ENSMUST00000212840 619 ntTSL 5 BASIC16.76■□□□□ 0.27
Scnn1aQ61180 AC124732.1-201ENSMUST00000221551 910 ntBASIC16.76■□□□□ 0.27
Scnn1aQ61180 AC121804.3-201ENSMUST00000223420 295 ntBASIC16.76■□□□□ 0.27
Scnn1aQ61180 Cela1-201ENSMUST00000023775 1103 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Scnn1aQ61180 Cnpy2-201ENSMUST00000026446 763 ntAPPRIS P1 TSL 5 BASIC16.76■□□□□ 0.27
Scnn1aQ61180 2900055J20Rik-201ENSMUST00000096572 723 ntAPPRIS P1 BASIC16.76■□□□□ 0.27
Scnn1aQ61180 Usp38-201ENSMUST00000042724 4707 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Scnn1aQ61180 Rtn1-202ENSMUST00000078505 3629 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Scnn1aQ61180 Gale-202ENSMUST00000102541 1430 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Scnn1aQ61180 Psmd4-203ENSMUST00000117355 1756 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
Scnn1aQ61180 Loxl4-203ENSMUST00000164786 2617 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
Scnn1aQ61180 Gm5357-201ENSMUST00000212720 1924 ntBASIC16.76■□□□□ 0.27
Scnn1aQ61180 Steap2-205ENSMUST00000115427 3470 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Scnn1aQ61180 Steap2-202ENSMUST00000115424 3285 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Scnn1aQ61180 Fignl2-202ENSMUST00000213610 4462 ntAPPRIS P1 TSL 5 BASIC16.76■□□□□ 0.27
Scnn1aQ61180 Lrrn2-201ENSMUST00000027706 3428 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Scnn1aQ61180 Arhgef25-201ENSMUST00000019611 2218 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Scnn1aQ61180 Eda-205ENSMUST00000113778 4942 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
Scnn1aQ61180 Gpsm1-202ENSMUST00000066936 3384 ntAPPRIS P3 TSL 1 (best) BASIC16.75■□□□□ 0.27
Scnn1aQ61180 Gm16201-202ENSMUST00000139218 2330 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
Retrieved 100 of 76,532 protein–RNA pairs in 43.6 ms