Protein–RNA interactions for Protein: Q61009

Scarb1, Scavenger receptor class B member 1, mousemouse

Predictions only

Length 509 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scarb1Q61009 Mrpl28-201ENSMUST00000025014 1048 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Scarb1Q61009 Rplp2-201ENSMUST00000084434 964 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Scarb1Q61009 St3gal3-202ENSMUST00000097912 2143 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Scarb1Q61009 Sufu-203ENSMUST00000118440 2663 ntTSL 5 BASIC12.36□□□□□ -0.43
Scarb1Q61009 Socs3-201ENSMUST00000054002 2552 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Scarb1Q61009 Hlcs-202ENSMUST00000163193 5371 ntAPPRIS P2 TSL 1 (best) BASIC12.36□□□□□ -0.43
Scarb1Q61009 1300017J02Rik-201ENSMUST00000035163 2284 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Scarb1Q61009 Cacna1g-209ENSMUST00000107791 8002 ntAPPRIS ALT2 TSL 5 BASIC12.36□□□□□ -0.43
Scarb1Q61009 Dlk2-203ENSMUST00000166617 1528 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Scarb1Q61009 Wbp11-201ENSMUST00000116514 2739 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Scarb1Q61009 Zbtb17-201ENSMUST00000006377 2722 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Scarb1Q61009 Mapk7-202ENSMUST00000101085 3254 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Scarb1Q61009 AU040320-202ENSMUST00000102607 4191 ntAPPRIS P4 TSL 1 (best) BASIC12.36□□□□□ -0.43
Scarb1Q61009 Zbtb20-205ENSMUST00000114695 2977 ntAPPRIS P3 TSL 1 (best) BASIC12.36□□□□□ -0.43
Scarb1Q61009 Ptp4a1-202ENSMUST00000076587 2851 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Scarb1Q61009 Chd1-202ENSMUST00000024627 7916 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Scarb1Q61009 Gm44645-201ENSMUST00000205492 1653 ntBASIC12.35□□□□□ -0.43
Scarb1Q61009 Ccser2-202ENSMUST00000090024 7509 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Scarb1Q61009 Gm43796-201ENSMUST00000202853 2012 ntAPPRIS P1 TSL 5 BASIC12.35□□□□□ -0.43
Scarb1Q61009 Hist1h2be-202ENSMUST00000091704 2480 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Scarb1Q61009 N4bp3-201ENSMUST00000001080 2367 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Scarb1Q61009 Dtx3-201ENSMUST00000038217 1944 ntAPPRIS P2 TSL 1 (best) BASIC12.35□□□□□ -0.43
Scarb1Q61009 Klhl12-201ENSMUST00000027725 3408 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Scarb1Q61009 Cfap69-205ENSMUST00000135252 2188 ntAPPRIS ALT2 TSL 1 (best) BASIC12.35□□□□□ -0.43
Scarb1Q61009 Arl6ip6-201ENSMUST00000028336 2548 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Scarb1Q61009 Notch1-201ENSMUST00000028288 9488 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Scarb1Q61009 Ercc2-203ENSMUST00000108461 2799 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Scarb1Q61009 Rps27a-202ENSMUST00000102845 791 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Scarb1Q61009 Thap3-202ENSMUST00000105665 832 ntAPPRIS ALT2 TSL 1 (best) BASIC12.35□□□□□ -0.43
Scarb1Q61009 Zfp64-202ENSMUST00000109161 1009 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Scarb1Q61009 Fam3a-203ENSMUST00000114139 931 ntTSL 5 BASIC12.35□□□□□ -0.43
Scarb1Q61009 Gm15358-201ENSMUST00000119249 520 ntBASIC12.35□□□□□ -0.43
Scarb1Q61009 Tsc22d1-208ENSMUST00000142683 797 ntTSL 3 BASIC12.35□□□□□ -0.43
Scarb1Q61009 Tsfm-207ENSMUST00000152054 655 ntTSL 3 BASIC12.35□□□□□ -0.43
Scarb1Q61009 Washc3-203ENSMUST00000182183 838 ntAPPRIS ALT2 TSL 2 BASIC12.35□□□□□ -0.43
Scarb1Q61009 Jpx-202ENSMUST00000182447 712 ntTSL 3 BASIC12.35□□□□□ -0.43
Scarb1Q61009 Gm27742-201ENSMUST00000184667 60 ntBASIC12.35□□□□□ -0.43
Scarb1Q61009 Gm43661-201ENSMUST00000199099 687 ntTSL 3 BASIC12.35□□□□□ -0.43
Scarb1Q61009 D530033B14Rik-201ENSMUST00000205412 546 ntTSL 5 BASIC12.35□□□□□ -0.43
Scarb1Q61009 Gm7506-201ENSMUST00000207758 815 ntBASIC12.35□□□□□ -0.43
Scarb1Q61009 Npw-202ENSMUST00000213213 531 ntAPPRIS P2 TSL 1 (best) BASIC12.35□□□□□ -0.43
Scarb1Q61009 Psma6-201ENSMUST00000021412 1042 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Scarb1Q61009 AC122024.2-201ENSMUST00000220086 871 ntBASIC12.35□□□□□ -0.43
Scarb1Q61009 AC171004.1-201ENSMUST00000221723 664 ntTSL 3 BASIC12.35□□□□□ -0.43
Scarb1Q61009 Il17a-201ENSMUST00000027061 1171 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Scarb1Q61009 Fcnb-201ENSMUST00000028179 1170 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Scarb1Q61009 Rpl36al-201ENSMUST00000054544 526 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Scarb1Q61009 P2rx6-201ENSMUST00000023441 2345 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Scarb1Q61009 Myef2-207ENSMUST00000147105 2928 ntAPPRIS ALT2 TSL 1 (best) BASIC12.35□□□□□ -0.43
Scarb1Q61009 Gm13003-201ENSMUST00000151040 2904 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Scarb1Q61009 Trmt1-205ENSMUST00000125370 2114 ntAPPRIS ALT2 TSL 5 BASIC12.35□□□□□ -0.43
Scarb1Q61009 Tvp23b-201ENSMUST00000014321 1784 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Scarb1Q61009 Suv39h1-201ENSMUST00000115636 2707 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Scarb1Q61009 Nop9-201ENSMUST00000019441 3694 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Scarb1Q61009 Nup88-202ENSMUST00000108530 2389 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Scarb1Q61009 Glb1-201ENSMUST00000063042 2396 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Scarb1Q61009 Gabpb1-205ENSMUST00000110424 2613 ntAPPRIS P3 TSL 1 (best) BASIC12.35□□□□□ -0.43
Scarb1Q61009 Col25a1-201ENSMUST00000080335 2624 ntAPPRIS P4 TSL 5 BASIC12.35□□□□□ -0.43
Scarb1Q61009 Gm37844-201ENSMUST00000192473 4097 ntBASIC12.35□□□□□ -0.43
Scarb1Q61009 Dnm1-214ENSMUST00000201433 3146 ntAPPRIS ALT1 TSL 5 BASIC12.35□□□□□ -0.43
Scarb1Q61009 Plcxd1-201ENSMUST00000086687 1346 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Scarb1Q61009 Endov-202ENSMUST00000106244 5070 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Scarb1Q61009 Pdgfc-201ENSMUST00000029652 3521 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Scarb1Q61009 Plch2-208ENSMUST00000145662 1818 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Scarb1Q61009 Dsn1-201ENSMUST00000103129 2080 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Scarb1Q61009 Gnas-204ENSMUST00000087877 3947 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Scarb1Q61009 AC157650.3-201ENSMUST00000225058 1476 ntBASIC12.34□□□□□ -0.43
Scarb1Q61009 Ints8-203ENSMUST00000108319 3220 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Scarb1Q61009 Mapk1ip1-203ENSMUST00000119664 1883 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Scarb1Q61009 Galnt6os-201ENSMUST00000160960 1389 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Scarb1Q61009 Six3os1-211ENSMUST00000176958 2889 ntTSL 2 BASIC12.34□□□□□ -0.43
Scarb1Q61009 Gm5837-201ENSMUST00000191844 1369 ntBASIC12.34□□□□□ -0.43
Scarb1Q61009 Slc52a3-201ENSMUST00000073228 2669 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Scarb1Q61009 Hist1h2bj-201ENSMUST00000110452 463 ntAPPRIS P1 BASIC12.34□□□□□ -0.43
Scarb1Q61009 Hist1h2bp-202ENSMUST00000110473 621 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Scarb1Q61009 Adal-203ENSMUST00000110662 1231 ntTSL 5 BASIC12.34□□□□□ -0.43
Scarb1Q61009 Gssos2-201ENSMUST00000130859 727 ntTSL 3 BASIC12.34□□□□□ -0.43
Scarb1Q61009 Gm23634-201ENSMUST00000175071 91 ntBASIC12.34□□□□□ -0.43
Scarb1Q61009 AC093926.2-201ENSMUST00000214468 1228 ntBASIC12.34□□□□□ -0.43
Scarb1Q61009 Gm8655-201ENSMUST00000221159 852 ntBASIC12.34□□□□□ -0.43
Scarb1Q61009 Hist1h2bm-201ENSMUST00000224651 524 ntAPPRIS P1 BASIC12.34□□□□□ -0.43
Scarb1Q61009 Hist1h2aj-201ENSMUST00000091710 352 ntBASIC12.34□□□□□ -0.43
Scarb1Q61009 Nrxn1-207ENSMUST00000160844 9309 ntAPPRIS P2 TSL 1 (best) BASIC12.34□□□□□ -0.43
Scarb1Q61009 Plekha1-201ENSMUST00000048180 3321 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Scarb1Q61009 Sh3glb1-201ENSMUST00000163279 3961 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Scarb1Q61009 Tcn2-204ENSMUST00000109990 1914 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Scarb1Q61009 Pnrc2-201ENSMUST00000030436 1919 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Scarb1Q61009 B430305J03Rik-201ENSMUST00000066298 3702 ntAPPRIS P1 BASIC12.34□□□□□ -0.43
Scarb1Q61009 Vps35-201ENSMUST00000034131 3474 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Scarb1Q61009 Pde7b-205ENSMUST00000169404 1697 ntAPPRIS ALT2 TSL 5 BASIC12.34□□□□□ -0.43
Scarb1Q61009 Hipk3-202ENSMUST00000111124 4125 ntAPPRIS P1 TSL 5 BASIC12.34□□□□□ -0.43
Scarb1Q61009 Rgs16-201ENSMUST00000027748 2339 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Scarb1Q61009 Nat6-201ENSMUST00000093785 2053 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Scarb1Q61009 Ssh3-202ENSMUST00000113852 2735 ntAPPRIS ALT2 TSL 1 (best) BASIC12.34□□□□□ -0.43
Scarb1Q61009 Ssh3-201ENSMUST00000037992 2728 ntAPPRIS P2 TSL 1 (best) BASIC12.34□□□□□ -0.43
Scarb1Q61009 Ccdc92b-201ENSMUST00000100866 4002 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Scarb1Q61009 Ccdc8-201ENSMUST00000094805 4809 ntAPPRIS P1 BASIC12.34□□□□□ -0.43
Scarb1Q61009 Cd3eap-201ENSMUST00000047036 2239 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Scarb1Q61009 Gm7901-201ENSMUST00000120430 1597 ntBASIC12.34□□□□□ -0.43
Scarb1Q61009 Anks1b-213ENSMUST00000182284 2607 ntTSL 5 BASIC12.34□□□□□ -0.43
Retrieved 100 of 76,532 protein–RNA pairs in 34 ms