Protein–RNA interactions for Protein: Q60641

Nr1h4, Bile acid receptor, mousemouse

Predictions only

Length 488 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nr1h4Q60641 Gm43951-201ENSMUST00000204457 2889 ntAPPRIS P1 BASIC13.95□□□□□ -0.18
Nr1h4Q60641 Eef2kmt-201ENSMUST00000064635 2170 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Nr1h4Q60641 Wdtc1-202ENSMUST00000105906 4057 ntTSL 5 BASIC13.95□□□□□ -0.18
Nr1h4Q60641 Anks1b-204ENSMUST00000179337 2692 ntTSL 5 BASIC13.95□□□□□ -0.18
Nr1h4Q60641 Plcb3-201ENSMUST00000025912 4201 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Nr1h4Q60641 Glyr1-202ENSMUST00000115844 3348 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Nr1h4Q60641 Glyr1-201ENSMUST00000023189 3330 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Nr1h4Q60641 Rhox2h-201ENSMUST00000115162 779 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Nr1h4Q60641 Nabp2-204ENSMUST00000166608 979 ntTSL 5 BASIC13.95□□□□□ -0.18
Nr1h4Q60641 Tmem176a-202ENSMUST00000168406 1086 ntAPPRIS P1 TSL 3 BASIC13.95□□□□□ -0.18
Nr1h4Q60641 Tpi-rs2-201ENSMUST00000182471 756 ntBASIC13.95□□□□□ -0.18
Nr1h4Q60641 Gm9682-201ENSMUST00000197505 556 ntBASIC13.95□□□□□ -0.18
Nr1h4Q60641 5830454E08Rik-202ENSMUST00000213974 744 ntBASIC13.95□□□□□ -0.18
Nr1h4Q60641 AC110091.2-202ENSMUST00000216718 1148 ntTSL 5 BASIC13.95□□□□□ -0.18
Nr1h4Q60641 Slc2a6-201ENSMUST00000045702 2138 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Nr1h4Q60641 Gchfr-201ENSMUST00000057454 645 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Nr1h4Q60641 Birc5-201ENSMUST00000081387 947 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Nr1h4Q60641 Rgs6-216ENSMUST00000200911 2626 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
Nr1h4Q60641 Comt-202ENSMUST00000115609 1786 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Nr1h4Q60641 Gak-201ENSMUST00000046603 4453 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Nr1h4Q60641 Tub-202ENSMUST00000119474 2097 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Nr1h4Q60641 D6Ertd527e-204ENSMUST00000204927 2218 ntAPPRIS P3 TSL 1 (best) BASIC13.95□□□□□ -0.18
Nr1h4Q60641 Pgd-201ENSMUST00000084124 2218 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Nr1h4Q60641 Slc39a13-202ENSMUST00000079976 1884 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Nr1h4Q60641 Chodl-201ENSMUST00000023568 2535 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Nr1h4Q60641 Car7-201ENSMUST00000056051 1538 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Nr1h4Q60641 4933434E20Rik-203ENSMUST00000068798 1500 ntTSL 5 BASIC13.95□□□□□ -0.18
Nr1h4Q60641 Dpp6-204ENSMUST00000122171 4720 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
Nr1h4Q60641 Ppp1r1b-206ENSMUST00000150762 1801 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Nr1h4Q60641 Golim4-208ENSMUST00000167078 2902 ntAPPRIS P3 TSL 1 (best) BASIC13.94□□□□□ -0.18
Nr1h4Q60641 Ddx42-201ENSMUST00000021046 4011 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Nr1h4Q60641 C230004F18Rik-203ENSMUST00000137153 2138 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Nr1h4Q60641 2900026A02Rik-201ENSMUST00000050125 5876 ntAPPRIS P3 TSL 1 (best) BASIC13.94□□□□□ -0.18
Nr1h4Q60641 Rad18-202ENSMUST00000077088 2577 ntAPPRIS P3 TSL 1 (best) BASIC13.94□□□□□ -0.18
Nr1h4Q60641 Gm3928-201ENSMUST00000121141 1307 ntBASIC13.94□□□□□ -0.18
Nr1h4Q60641 Nlrp6-204ENSMUST00000184560 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC13.94□□□□□ -0.18
Nr1h4Q60641 Uros-203ENSMUST00000106145 1644 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Nr1h4Q60641 Pnn-201ENSMUST00000021381 3485 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Nr1h4Q60641 Acss1-201ENSMUST00000028944 3618 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Nr1h4Q60641 Rhpn1-201ENSMUST00000023244 1932 ntAPPRIS P3 TSL 1 (best) BASIC13.94□□□□□ -0.18
Nr1h4Q60641 Lrriq4-202ENSMUST00000108267 2387 ntAPPRIS P3 TSL 1 (best) BASIC13.94□□□□□ -0.18
Nr1h4Q60641 Chtop-205ENSMUST00000107343 3118 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Nr1h4Q60641 Ptdss1-201ENSMUST00000021990 3424 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Nr1h4Q60641 Fgf20-202ENSMUST00000118639 587 ntTSL 3 BASIC13.94□□□□□ -0.18
Nr1h4Q60641 Ndufab1-203ENSMUST00000123296 1416 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Nr1h4Q60641 A930006K02Rik-201ENSMUST00000149172 776 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Nr1h4Q60641 Fbxo46-202ENSMUST00000165913 2498 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Nr1h4Q60641 Gm20496-202ENSMUST00000173770 523 ntTSL 5 BASIC13.94□□□□□ -0.18
Nr1h4Q60641 Gm17807-201ENSMUST00000186869 298 ntBASIC13.94□□□□□ -0.18
Nr1h4Q60641 Pdcd6-201ENSMUST00000022060 1131 ntAPPRIS P2 TSL 1 (best) BASIC13.94□□□□□ -0.18
Nr1h4Q60641 Acin1-201ENSMUST00000022793 4735 ntAPPRIS P3 TSL 1 (best) BASIC13.94□□□□□ -0.18
Nr1h4Q60641 Atp5o-201ENSMUST00000023677 838 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Nr1h4Q60641 Gjb1-201ENSMUST00000052130 1565 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Nr1h4Q60641 Chmp2a-201ENSMUST00000005711 949 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Nr1h4Q60641 Mme-206ENSMUST00000194150 3345 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Nr1h4Q60641 Lzts1-201ENSMUST00000037049 1800 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Nr1h4Q60641 Axdnd1-204ENSMUST00000178036 3586 ntAPPRIS ALT2 TSL 5 BASIC13.94□□□□□ -0.18
Nr1h4Q60641 Krt14-201ENSMUST00000007272 1698 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Nr1h4Q60641 Gm26547-201ENSMUST00000181186 1508 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Nr1h4Q60641 Sema3b-201ENSMUST00000073448 2987 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Nr1h4Q60641 Gucy2e-202ENSMUST00000108664 4415 ntAPPRIS P1 TSL 5 BASIC13.94□□□□□ -0.18
Nr1h4Q60641 Ptk7-201ENSMUST00000044442 4255 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Nr1h4Q60641 Ahcy-201ENSMUST00000054607 2543 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Nr1h4Q60641 Gm45779-201ENSMUST00000212189 4064 ntBASIC13.94□□□□□ -0.18
Nr1h4Q60641 Dmtn-202ENSMUST00000022695 4080 ntTSL 5 BASIC13.94□□□□□ -0.18
Nr1h4Q60641 Cntfr-204ENSMUST00000102962 1926 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Nr1h4Q60641 Ankrd27-202ENSMUST00000186245 1926 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Nr1h4Q60641 Cdk6-201ENSMUST00000042410 2470 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Nr1h4Q60641 Fbxl5-207ENSMUST00000124610 2306 ntTSL 5 BASIC13.93□□□□□ -0.18
Nr1h4Q60641 Kcnh4-201ENSMUST00000107361 3748 ntAPPRIS P1 TSL 5 BASIC13.93□□□□□ -0.18
Nr1h4Q60641 Nrip2-202ENSMUST00000120405 1468 ntTSL 2 BASIC13.93□□□□□ -0.18
Nr1h4Q60641 Stap2-201ENSMUST00000043785 1491 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Nr1h4Q60641 Erich6-201ENSMUST00000041115 2195 ntAPPRIS P1 TSL 5 BASIC13.93□□□□□ -0.18
Nr1h4Q60641 Serinc1-201ENSMUST00000020027 2880 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Nr1h4Q60641 Gata2-201ENSMUST00000015197 3571 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Nr1h4Q60641 Dcaf10-204ENSMUST00000155551 7250 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Nr1h4Q60641 Taf3-201ENSMUST00000026888 4792 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Nr1h4Q60641 Ift74-202ENSMUST00000107104 1713 ntTSL 2 BASIC13.93□□□□□ -0.18
Nr1h4Q60641 Rxrb-202ENSMUST00000116612 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
Nr1h4Q60641 Pld3-201ENSMUST00000117095 2282 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Nr1h4Q60641 Nkd2-202ENSMUST00000118096 2801 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
Nr1h4Q60641 Dph5-204ENSMUST00000189799 1558 ntAPPRIS P1 TSL 5 BASIC13.93□□□□□ -0.18
Nr1h4Q60641 B3gnt3-201ENSMUST00000034260 3055 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Nr1h4Q60641 Rabepk-203ENSMUST00000118108 1431 ntAPPRIS P1 TSL 5 BASIC13.93□□□□□ -0.18
Nr1h4Q60641 Gm26546-201ENSMUST00000181000 4276 ntTSL 5 BASIC13.93□□□□□ -0.18
Nr1h4Q60641 Tmem241-205ENSMUST00000209859 1426 ntAPPRIS P4 TSL 1 (best) BASIC13.93□□□□□ -0.18
Nr1h4Q60641 Gatm-201ENSMUST00000028624 2389 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Nr1h4Q60641 Ube2k-210ENSMUST00000202679 4682 ntTSL 5 BASIC13.93□□□□□ -0.18
Nr1h4Q60641 Nrn1l-202ENSMUST00000118920 603 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
Nr1h4Q60641 D3Ertd751e-205ENSMUST00000120167 773 ntAPPRIS ALT2 TSL 5 BASIC13.93□□□□□ -0.18
Nr1h4Q60641 Rps13-ps1-201ENSMUST00000183478 538 ntBASIC13.93□□□□□ -0.18
Nr1h4Q60641 Qdpr-208ENSMUST00000197946 1206 ntTSL 5 BASIC13.93□□□□□ -0.18
Nr1h4Q60641 AC159301.1-201ENSMUST00000225130 1182 ntBASIC13.93□□□□□ -0.18
Nr1h4Q60641 Prm1-201ENSMUST00000023144 469 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Nr1h4Q60641 Inmt-201ENSMUST00000003569 1077 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Nr1h4Q60641 Mrgpra9-201ENSMUST00000098436 1049 ntAPPRIS ALT2 TSL 5 BASIC13.93□□□□□ -0.18
Nr1h4Q60641 Raver1-202ENSMUST00000217282 4234 ntAPPRIS ALT2 TSL 2 BASIC13.93□□□□□ -0.18
Nr1h4Q60641 Nupl1-207ENSMUST00000225311 2475 ntBASIC13.93□□□□□ -0.18
Nr1h4Q60641 Mocos-201ENSMUST00000068006 2884 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Nr1h4Q60641 Ffar2-202ENSMUST00000163504 1913 ntAPPRIS P1 TSL 2 BASIC13.93□□□□□ -0.18
Retrieved 100 of 76,532 protein–RNA pairs in 32.5 ms