Protein–RNA interactions for Protein: Q5SPW0

Vps54, Vacuolar protein sorting-associated protein 54, mousemouse

Predictions only

Length 977 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps54Q5SPW0 Gm6415-201ENSMUST00000118488 348 ntBASIC17.56■□□□□ 0.4
Vps54Q5SPW0 AC158804.1-201ENSMUST00000219046 541 ntTSL 3 BASIC17.56■□□□□ 0.4
Vps54Q5SPW0 Mapk8ip2-201ENSMUST00000023291 5558 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Vps54Q5SPW0 Tigd5-201ENSMUST00000192937 4801 ntAPPRIS P1 BASIC17.56■□□□□ 0.4
Vps54Q5SPW0 AI849053-201ENSMUST00000181021 2658 ntTSL 3 BASIC17.56■□□□□ 0.4
Vps54Q5SPW0 Ptp4a3-201ENSMUST00000053232 3608 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Vps54Q5SPW0 Tfdp2-201ENSMUST00000034982 7354 ntAPPRIS P3 TSL 1 (best) BASIC17.56■□□□□ 0.4
Vps54Q5SPW0 Rhd-201ENSMUST00000030627 1514 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Vps54Q5SPW0 Col16a1-201ENSMUST00000044565 5206 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Vps54Q5SPW0 Fgfr1op-202ENSMUST00000097419 3505 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
Vps54Q5SPW0 Lgi3-201ENSMUST00000047331 3174 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Vps54Q5SPW0 Tnks-201ENSMUST00000033929 9163 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Vps54Q5SPW0 Cald1-201ENSMUST00000031775 2142 ntAPPRIS ALT2 TSL 5 BASIC17.56■□□□□ 0.4
Vps54Q5SPW0 Pcp2-202ENSMUST00000128566 1447 ntAPPRIS ALT2 TSL 2 BASIC17.55■□□□□ 0.4
Vps54Q5SPW0 Hspa1a-201ENSMUST00000087328 2967 ntAPPRIS P1 BASIC17.55■□□□□ 0.4
Vps54Q5SPW0 D17Wsu92e-202ENSMUST00000114859 3522 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
Vps54Q5SPW0 Sppl2b-201ENSMUST00000035597 2869 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Vps54Q5SPW0 Zfp184-202ENSMUST00000102978 3198 ntAPPRIS P1 TSL 5 BASIC17.55■□□□□ 0.4
Vps54Q5SPW0 Kcnn1-201ENSMUST00000110078 4047 ntAPPRIS P2 TSL 1 (best) BASIC17.55■□□□□ 0.4
Vps54Q5SPW0 Kcnn1-202ENSMUST00000110081 4045 ntAPPRIS ALT2 TSL 5 BASIC17.55■□□□□ 0.4
Vps54Q5SPW0 4921504A21Rik-201ENSMUST00000180594 2156 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Vps54Q5SPW0 Tmod2-207ENSMUST00000215462 1564 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Vps54Q5SPW0 Tbx15-201ENSMUST00000029462 3566 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Vps54Q5SPW0 Gm13823-201ENSMUST00000119930 345 ntBASIC17.55■□□□□ 0.4
Vps54Q5SPW0 Gm15199-201ENSMUST00000129933 542 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Vps54Q5SPW0 Tex30-206ENSMUST00000133677 935 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Vps54Q5SPW0 Gm38294-201ENSMUST00000192831 381 ntBASIC17.55■□□□□ 0.4
Vps54Q5SPW0 9230114J08Rik-201ENSMUST00000200375 350 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Vps54Q5SPW0 Arf5-201ENSMUST00000020717 1116 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Vps54Q5SPW0 Atp6v0b-201ENSMUST00000036380 1000 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Vps54Q5SPW0 Olfr615-201ENSMUST00000098198 942 ntAPPRIS P1 BASIC17.55■□□□□ 0.4
Vps54Q5SPW0 Sema4c-203ENSMUST00000191677 3779 ntAPPRIS P1 TSL 5 BASIC17.55■□□□□ 0.4
Vps54Q5SPW0 Gatm-201ENSMUST00000028624 2389 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Vps54Q5SPW0 Rspo4-201ENSMUST00000042217 2371 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Vps54Q5SPW0 Gm26882-201ENSMUST00000181611 1537 ntTSL 5 BASIC17.55■□□□□ 0.4
Vps54Q5SPW0 March4-201ENSMUST00000047786 4553 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Vps54Q5SPW0 Ano8-201ENSMUST00000093450 3653 ntAPPRIS P2 TSL 1 (best) BASIC17.55■□□□□ 0.4
Vps54Q5SPW0 Iffo1-201ENSMUST00000117675 2833 ntAPPRIS P4 TSL 1 (best) BASIC17.55■□□□□ 0.4
Vps54Q5SPW0 Nfat5-211ENSMUST00000151114 4982 ntAPPRIS P3 TSL 1 (best) BASIC17.55■□□□□ 0.4
Vps54Q5SPW0 Slc38a7-201ENSMUST00000040481 3333 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Vps54Q5SPW0 0610005C13Rik-207ENSMUST00000210866 2434 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Vps54Q5SPW0 Lats1-202ENSMUST00000165952 7209 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Vps54Q5SPW0 Endov-203ENSMUST00000106245 5126 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Vps54Q5SPW0 Anks1-203ENSMUST00000114842 5610 ntAPPRIS P3 TSL 1 (best) BASIC17.54■□□□□ 0.4
Vps54Q5SPW0 0610009E02Rik-201ENSMUST00000133463 1609 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Vps54Q5SPW0 Tle1-202ENSMUST00000072695 3644 ntAPPRIS P2 TSL 1 (best) BASIC17.54■□□□□ 0.4
Vps54Q5SPW0 Scara3-201ENSMUST00000042046 3597 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Vps54Q5SPW0 Elf3-201ENSMUST00000003135 2095 ntAPPRIS P3 TSL 1 (best) BASIC17.54■□□□□ 0.4
Vps54Q5SPW0 Tbk1-201ENSMUST00000020316 3024 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Vps54Q5SPW0 Renbp-201ENSMUST00000114379 1318 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Vps54Q5SPW0 Arid5a-201ENSMUST00000097778 2270 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
Vps54Q5SPW0 Acadm-201ENSMUST00000072697 2047 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Vps54Q5SPW0 Ush1c-202ENSMUST00000078680 2047 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
Vps54Q5SPW0 Reep1-201ENSMUST00000121469 3924 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Vps54Q5SPW0 Sgpl1-202ENSMUST00000122259 4102 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Vps54Q5SPW0 Gm12264-201ENSMUST00000123949 500 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Vps54Q5SPW0 Hoxa7-202ENSMUST00000134367 807 ntTSL 5 BASIC17.54■□□□□ 0.4
Vps54Q5SPW0 Ntpcr-205ENSMUST00000143504 520 ntTSL 5 BASIC17.54■□□□□ 0.4
Vps54Q5SPW0 Styxl1-207ENSMUST00000177559 1236 ntAPPRIS P1 TSL 5 BASIC17.54■□□□□ 0.4
Vps54Q5SPW0 Gm9182-201ENSMUST00000217829 639 ntBASIC17.54■□□□□ 0.4
Vps54Q5SPW0 AC154621.1-201ENSMUST00000226155 1119 ntBASIC17.54■□□□□ 0.4
Vps54Q5SPW0 Rasgrp1-207ENSMUST00000178884 5104 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Vps54Q5SPW0 Gcnt4-201ENSMUST00000171324 5087 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Vps54Q5SPW0 Znfx1-201ENSMUST00000048988 7218 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Vps54Q5SPW0 Mapk9-201ENSMUST00000020634 4675 ntAPPRIS P3 TSL 1 (best) BASIC17.54■□□□□ 0.4
Vps54Q5SPW0 Miip-201ENSMUST00000030886 1813 ntAPPRIS P2 TSL 1 (best) BASIC17.54■□□□□ 0.4
Vps54Q5SPW0 Gm26850-201ENSMUST00000181653 2669 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Vps54Q5SPW0 Spns1-202ENSMUST00000119754 2001 ntTSL 5 BASIC17.54■□□□□ 0.4
Vps54Q5SPW0 Rbm15-201ENSMUST00000061772 4343 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Vps54Q5SPW0 Fam84b-201ENSMUST00000100635 5565 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Vps54Q5SPW0 Cbl-201ENSMUST00000037644 4901 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
Vps54Q5SPW0 Slc33a1-202ENSMUST00000160883 1978 ntAPPRIS P1 TSL 5 BASIC17.53■□□□□ 0.4
Vps54Q5SPW0 Unc93b1-204ENSMUST00000165711 1991 ntAPPRIS ALT2 TSL 5 BASIC17.53■□□□□ 0.4
Vps54Q5SPW0 Tomm70a-201ENSMUST00000166897 3778 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Vps54Q5SPW0 Gm42893-201ENSMUST00000198035 1502 ntTSL 3 BASIC17.53■□□□□ 0.4
Vps54Q5SPW0 Tcf19-202ENSMUST00000160885 1732 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Vps54Q5SPW0 Ftcd-201ENSMUST00000001183 1933 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Vps54Q5SPW0 Nes-203ENSMUST00000160694 5958 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
Vps54Q5SPW0 Rnf180-203ENSMUST00000224662 2734 ntAPPRIS ALT2 BASIC17.53■□□□□ 0.4
Vps54Q5SPW0 Rnf44-201ENSMUST00000037422 3734 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Vps54Q5SPW0 Pde1c-203ENSMUST00000164037 3068 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Vps54Q5SPW0 Gjd2-201ENSMUST00000090275 2879 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Vps54Q5SPW0 Ep300-201ENSMUST00000068387 9566 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Vps54Q5SPW0 Pde7b-205ENSMUST00000169404 1697 ntAPPRIS ALT2 TSL 5 BASIC17.53■□□□□ 0.4
Vps54Q5SPW0 Slc9a3r2-202ENSMUST00000019684 1688 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Vps54Q5SPW0 Inha-201ENSMUST00000037330 1475 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Vps54Q5SPW0 Ninj2-202ENSMUST00000112711 853 ntAPPRIS P3 TSL 1 (best) BASIC17.53■□□□□ 0.4
Vps54Q5SPW0 Ppil3-203ENSMUST00000114348 1033 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Vps54Q5SPW0 Gm15693-201ENSMUST00000120470 637 ntBASIC17.53■□□□□ 0.4
Vps54Q5SPW0 Hras-203ENSMUST00000124314 1073 ntTSL 5 BASIC17.53■□□□□ 0.4
Vps54Q5SPW0 Cd209f-202ENSMUST00000138439 1165 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
Vps54Q5SPW0 Cd209f-203ENSMUST00000145007 1186 ntAPPRIS P2 TSL 1 (best) BASIC17.53■□□□□ 0.4
Vps54Q5SPW0 Mir124-2hg-206ENSMUST00000189754 525 ntTSL 3 BASIC17.53■□□□□ 0.4
Vps54Q5SPW0 2310001H17Rik-206ENSMUST00000205051 676 ntTSL 3 BASIC17.53■□□□□ 0.4
Vps54Q5SPW0 Krtap19-4-201ENSMUST00000051103 304 ntAPPRIS P1 BASIC17.53■□□□□ 0.4
Vps54Q5SPW0 Tbc1d1-203ENSMUST00000119756 4760 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
Vps54Q5SPW0 Arhgap44-203ENSMUST00000093002 3982 ntAPPRIS ALT2 TSL 5 BASIC17.53■□□□□ 0.4
Vps54Q5SPW0 Slc35c2-201ENSMUST00000017808 1843 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Vps54Q5SPW0 Epha1-203ENSMUST00000204357 2948 ntTSL 5 BASIC17.53■□□□□ 0.4
Vps54Q5SPW0 Samhd1-202ENSMUST00000088523 1996 ntAPPRIS ALT2 TSL 5 BASIC17.53■□□□□ 0.4
Retrieved 100 of 76,532 protein–RNA pairs in 24.4 ms