Protein–RNA interactions for Protein: Q4FZC9

Syne3, Nesprin-3, mousemouse

Predictions only

Length 975 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Syne3Q4FZC9 1810062O18Rik-203ENSMUST00000129237 647 ntTSL 5 BASIC15.55■□□□□ 0.08
Syne3Q4FZC9 Mymx-202ENSMUST00000169137 616 ntAPPRIS P4 TSL 2 BASIC15.55■□□□□ 0.08
Syne3Q4FZC9 5430405H02Rik-203ENSMUST00000185402 904 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
Syne3Q4FZC9 Gm43767-201ENSMUST00000198933 381 ntBASIC15.55■□□□□ 0.08
Syne3Q4FZC9 Chchd6-201ENSMUST00000032172 1121 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Syne3Q4FZC9 Slc16a9-201ENSMUST00000046807 3756 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Syne3Q4FZC9 Tpbg-202ENSMUST00000098500 3481 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Syne3Q4FZC9 Ddhd1-203ENSMUST00000111828 9802 ntAPPRIS ALT2 TSL 1 (best) BASIC15.55■□□□□ 0.08
Syne3Q4FZC9 Synm-201ENSMUST00000051389 6953 ntAPPRIS ALT2 TSL 1 (best) BASIC15.55■□□□□ 0.08
Syne3Q4FZC9 Gm43951-201ENSMUST00000204457 2889 ntAPPRIS P1 BASIC15.55■□□□□ 0.08
Syne3Q4FZC9 Large2-214ENSMUST00000176774 2377 ntAPPRIS ALT2 TSL 5 BASIC15.55■□□□□ 0.08
Syne3Q4FZC9 Wdr46-201ENSMUST00000025170 2227 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Syne3Q4FZC9 Edn3-201ENSMUST00000029030 3117 ntAPPRIS P2 TSL 1 (best) BASIC15.54■□□□□ 0.08
Syne3Q4FZC9 Cdc37l1-204ENSMUST00000224511 2944 ntAPPRIS ALT2 BASIC15.54■□□□□ 0.08
Syne3Q4FZC9 Serinc1-201ENSMUST00000020027 2880 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Syne3Q4FZC9 C920006O11Rik-201ENSMUST00000180974 1444 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
Syne3Q4FZC9 Bet1l-201ENSMUST00000026557 2268 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Syne3Q4FZC9 Ifna12-201ENSMUST00000102806 797 ntAPPRIS P1 BASIC15.54■□□□□ 0.08
Syne3Q4FZC9 Dlk1-203ENSMUST00000109842 1129 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
Syne3Q4FZC9 Ccer2-201ENSMUST00000178767 1054 ntAPPRIS P1 TSL 5 BASIC15.54■□□□□ 0.08
Syne3Q4FZC9 Gm27301-201ENSMUST00000184012 127 ntBASIC15.54■□□□□ 0.08
Syne3Q4FZC9 Gm2213-201ENSMUST00000197485 688 ntBASIC15.54■□□□□ 0.08
Syne3Q4FZC9 Gm44945-201ENSMUST00000206764 1187 ntBASIC15.54■□□□□ 0.08
Syne3Q4FZC9 Frmd5-213ENSMUST00000212518 922 ntTSL 5 BASIC15.54■□□□□ 0.08
Syne3Q4FZC9 Thap2-203ENSMUST00000218989 527 ntBASIC15.54■□□□□ 0.08
Syne3Q4FZC9 Bloc1s5-203ENSMUST00000224902 612 ntBASIC15.54■□□□□ 0.08
Syne3Q4FZC9 Pold4-201ENSMUST00000025773 910 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Syne3Q4FZC9 Mxra8os-201ENSMUST00000097740 687 ntBASIC15.54■□□□□ 0.08
Syne3Q4FZC9 Mdfic-203ENSMUST00000125326 3635 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
Syne3Q4FZC9 N6amt1-202ENSMUST00000118115 1951 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
Syne3Q4FZC9 Oas1a-201ENSMUST00000080322 1885 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Syne3Q4FZC9 Dtd2-201ENSMUST00000021339 2564 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Syne3Q4FZC9 Dek-201ENSMUST00000021807 2556 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Syne3Q4FZC9 Tvp23b-201ENSMUST00000014321 1784 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Syne3Q4FZC9 Apc-202ENSMUST00000079362 8867 ntAPPRIS P2 TSL 1 (best) BASIC15.54■□□□□ 0.08
Syne3Q4FZC9 Acin1-224ENSMUST00000167015 1746 ntAPPRIS ALT2 TSL 1 (best) BASIC15.54■□□□□ 0.08
Syne3Q4FZC9 Tmem255a-203ENSMUST00000089056 1745 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
Syne3Q4FZC9 Hmga2-201ENSMUST00000072777 3710 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Syne3Q4FZC9 Cry2-202ENSMUST00000111278 2160 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Syne3Q4FZC9 Ppfia3-201ENSMUST00000003961 4647 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Syne3Q4FZC9 Pcnx3-201ENSMUST00000068169 5276 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
Syne3Q4FZC9 Fbxo46-202ENSMUST00000165913 2498 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Syne3Q4FZC9 Fam57b-203ENSMUST00000205324 1915 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
Syne3Q4FZC9 Sugp2-214ENSMUST00000164403 4099 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Syne3Q4FZC9 Irx3os-201ENSMUST00000062522 2988 ntTSL 5 BASIC15.53■□□□□ 0.08
Syne3Q4FZC9 Scube1-205ENSMUST00000171496 7824 ntAPPRIS P3 TSL 5 BASIC15.53■□□□□ 0.08
Syne3Q4FZC9 Slc39a13-202ENSMUST00000079976 1884 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
Syne3Q4FZC9 1700029J07Rik-202ENSMUST00000098786 1340 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Syne3Q4FZC9 Gm43195-201ENSMUST00000200614 2332 ntBASIC15.53■□□□□ 0.08
Syne3Q4FZC9 AC162938.1-201ENSMUST00000213140 2323 ntBASIC15.53■□□□□ 0.08
Syne3Q4FZC9 Znhit1-204ENSMUST00000111091 1070 ntTSL 5 BASIC15.53■□□□□ 0.08
Syne3Q4FZC9 Trem2-202ENSMUST00000113237 1056 ntAPPRIS ALT2 TSL 1 (best) BASIC15.53■□□□□ 0.08
Syne3Q4FZC9 Slc7a10-203ENSMUST00000135452 629 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
Syne3Q4FZC9 Gm5177-201ENSMUST00000183092 997 ntBASIC15.53■□□□□ 0.08
Syne3Q4FZC9 1700017L05Rik-201ENSMUST00000201654 558 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
Syne3Q4FZC9 1700030N18Rik-201ENSMUST00000202497 966 ntBASIC15.53■□□□□ 0.08
Syne3Q4FZC9 AC159295.1-201ENSMUST00000225326 940 ntBASIC15.53■□□□□ 0.08
Syne3Q4FZC9 Cox7a2l-201ENSMUST00000025095 1078 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Syne3Q4FZC9 Klk15-201ENSMUST00000068625 845 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Syne3Q4FZC9 Itgb1-201ENSMUST00000090006 3815 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Syne3Q4FZC9 Pard6a-202ENSMUST00000098444 1273 ntTSL 2 BASIC15.53■□□□□ 0.08
Syne3Q4FZC9 Ss18l1-201ENSMUST00000041126 4343 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Syne3Q4FZC9 Abhd16b-201ENSMUST00000069649 1775 ntAPPRIS P1 BASIC15.53■□□□□ 0.08
Syne3Q4FZC9 Desi2-201ENSMUST00000027783 8802 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Syne3Q4FZC9 Serp1-201ENSMUST00000029385 4611 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Syne3Q4FZC9 Brix1-201ENSMUST00000022855 2664 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Syne3Q4FZC9 Eef2kmt-201ENSMUST00000064635 2170 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Syne3Q4FZC9 Lrwd1-201ENSMUST00000006301 2473 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Syne3Q4FZC9 Acss1-201ENSMUST00000028944 3618 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Syne3Q4FZC9 Stap2-201ENSMUST00000043785 1491 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Syne3Q4FZC9 Anks1b-204ENSMUST00000179337 2692 ntTSL 5 BASIC15.52■□□□□ 0.08
Syne3Q4FZC9 Nfya-206ENSMUST00000160319 1407 ntTSL 5 BASIC15.52■□□□□ 0.08
Syne3Q4FZC9 Csnk1g2-202ENSMUST00000085435 1825 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Syne3Q4FZC9 Mettl27-203ENSMUST00000111218 1387 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Syne3Q4FZC9 Mrpl58-203ENSMUST00000106539 2522 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
Syne3Q4FZC9 Fuca1-201ENSMUST00000030434 2525 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Syne3Q4FZC9 4930438A08Rik-201ENSMUST00000108834 2093 ntAPPRIS P1 TSL 5 BASIC15.52■□□□□ 0.08
Syne3Q4FZC9 Spdef-202ENSMUST00000114870 2070 ntAPPRIS P1 TSL 5 BASIC15.52■□□□□ 0.08
Syne3Q4FZC9 Rasgrp2-205ENSMUST00000113471 535 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
Syne3Q4FZC9 Rpl34-ps1-201ENSMUST00000121998 354 ntBASIC15.52■□□□□ 0.08
Syne3Q4FZC9 Hoxb8-203ENSMUST00000168043 1141 ntAPPRIS P1 TSL 5 BASIC15.52■□□□□ 0.08
Syne3Q4FZC9 1600014C10Rik-207ENSMUST00000179503 784 ntTSL 5 BASIC15.52■□□□□ 0.08
Syne3Q4FZC9 1700021A07Rik-203ENSMUST00000188024 404 ntTSL 3 BASIC15.52■□□□□ 0.08
Syne3Q4FZC9 Calcb-201ENSMUST00000032902 962 ntAPPRIS P2 TSL 1 (best) BASIC15.52■□□□□ 0.08
Syne3Q4FZC9 Anapc15-202ENSMUST00000035395 836 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
Syne3Q4FZC9 Rpl28-202ENSMUST00000078432 772 ntAPPRIS P1 TSL 2 BASIC15.52■□□□□ 0.08
Syne3Q4FZC9 Rpl34-ps2-201ENSMUST00000081679 354 ntBASIC15.52■□□□□ 0.08
Syne3Q4FZC9 Gm10154-201ENSMUST00000084445 354 ntBASIC15.52■□□□□ 0.08
Syne3Q4FZC9 Gm10313-201ENSMUST00000095320 1002 ntBASIC15.52■□□□□ 0.08
Syne3Q4FZC9 Lsmem1-201ENSMUST00000095760 1213 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Syne3Q4FZC9 Camkk2-201ENSMUST00000111668 4861 ntAPPRIS ALT2 TSL 1 (best) BASIC15.52■□□□□ 0.08
Syne3Q4FZC9 Eif5-201ENSMUST00000050993 1969 ntAPPRIS P2 TSL 1 (best) BASIC15.52■□□□□ 0.07
Syne3Q4FZC9 Mib1-201ENSMUST00000052838 10231 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
Syne3Q4FZC9 Pard6b-201ENSMUST00000052125 3399 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
Syne3Q4FZC9 Acot6-201ENSMUST00000056822 3388 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
Syne3Q4FZC9 Gnpda2-202ENSMUST00000120789 1594 ntTSL 1 (best) BASIC15.52■□□□□ 0.07
Syne3Q4FZC9 Gm27177-203ENSMUST00000184034 1911 ntTSL 5 BASIC15.52■□□□□ 0.07
Syne3Q4FZC9 Elf3-202ENSMUST00000185752 1901 ntAPPRIS ALT2 TSL 1 (best) BASIC15.52■□□□□ 0.07
Syne3Q4FZC9 Ano7-201ENSMUST00000058682 2963 ntAPPRIS ALT2 TSL 1 (best) BASIC15.52■□□□□ 0.07
Syne3Q4FZC9 AC148324.1-201ENSMUST00000219034 4240 ntBASIC15.52■□□□□ 0.07
Retrieved 100 of 76,532 protein–RNA pairs in 30.6 ms