Protein–RNA interactions for Protein: Q3UWA4

Trim40, Tripartite motif-containing protein 40, mousemouse

Predictions only

Length 246 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim40Q3UWA4 9330020H09Rik-201ENSMUST00000163781 2147 ntTSL 2 BASIC13.75□□□□□ -0.21
Trim40Q3UWA4 Olfr317-203ENSMUST00000216196 2781 ntAPPRIS P1 TSL 5 BASIC13.75□□□□□ -0.21
Trim40Q3UWA4 Slc27a1-201ENSMUST00000034267 2795 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Trim40Q3UWA4 Lsm12-202ENSMUST00000107156 2015 ntTSL 5 BASIC13.75□□□□□ -0.21
Trim40Q3UWA4 Auh-201ENSMUST00000021913 1320 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Trim40Q3UWA4 Camta2-203ENSMUST00000108544 4632 ntAPPRIS ALT2 TSL 1 (best) BASIC13.75□□□□□ -0.21
Trim40Q3UWA4 Vrk3-201ENSMUST00000002275 1969 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Trim40Q3UWA4 Syngap1-202ENSMUST00000177932 3927 ntAPPRIS ALT2 TSL 5 BASIC13.75□□□□□ -0.21
Trim40Q3UWA4 Ftcd-201ENSMUST00000001183 1933 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Trim40Q3UWA4 Cd82-204ENSMUST00000111257 1003 ntAPPRIS P1 TSL 5 BASIC13.75□□□□□ -0.21
Trim40Q3UWA4 Eif4e2-205ENSMUST00000113232 1125 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
Trim40Q3UWA4 Mis18bp1-202ENSMUST00000124201 717 ntTSL 3 BASIC13.75□□□□□ -0.21
Trim40Q3UWA4 Gm15545-202ENSMUST00000141011 899 ntTSL 3 BASIC13.75□□□□□ -0.21
Trim40Q3UWA4 Gm7616-201ENSMUST00000143112 624 ntTSL 3 BASIC13.75□□□□□ -0.21
Trim40Q3UWA4 Zfp125-202ENSMUST00000144811 704 ntTSL 5 BASIC13.75□□□□□ -0.21
Trim40Q3UWA4 Gm43767-201ENSMUST00000198933 381 ntBASIC13.75□□□□□ -0.21
Trim40Q3UWA4 Ten1-201ENSMUST00000021130 902 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Trim40Q3UWA4 Gm45890-204ENSMUST00000212356 545 ntTSL 2 BASIC13.75□□□□□ -0.21
Trim40Q3UWA4 Nudt14-203ENSMUST00000221497 355 ntTSL 2 BASIC13.75□□□□□ -0.21
Trim40Q3UWA4 Gm26709-203ENSMUST00000223260 715 ntTSL 5 BASIC13.75□□□□□ -0.21
Trim40Q3UWA4 Gm9991-201ENSMUST00000070048 1207 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
Trim40Q3UWA4 2310039H08Rik-201ENSMUST00000071430 773 ntAPPRIS P1 BASIC13.75□□□□□ -0.21
Trim40Q3UWA4 Pik3cd-204ENSMUST00000105690 4921 ntAPPRIS P4 TSL 1 (best) BASIC13.75□□□□□ -0.21
Trim40Q3UWA4 Slc5a2-202ENSMUST00000118169 2277 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Trim40Q3UWA4 Aldh1b1-201ENSMUST00000044384 2298 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Trim40Q3UWA4 Ly6h-207ENSMUST00000163116 2801 ntAPPRIS ALT1 TSL 2 BASIC13.75□□□□□ -0.21
Trim40Q3UWA4 Nyap1-201ENSMUST00000061789 3912 ntAPPRIS P3 TSL 5 BASIC13.75□□□□□ -0.21
Trim40Q3UWA4 Me1-201ENSMUST00000034989 3288 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Trim40Q3UWA4 Uhrf1bp1l-201ENSMUST00000020112 6448 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Trim40Q3UWA4 Nr2f2-201ENSMUST00000032768 4222 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Trim40Q3UWA4 Dcaf13-201ENSMUST00000022909 1551 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Trim40Q3UWA4 AI593442-203ENSMUST00000213937 5674 ntAPPRIS P1 TSL 2 BASIC13.75□□□□□ -0.21
Trim40Q3UWA4 Cobl-208ENSMUST00000172919 2566 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
Trim40Q3UWA4 Mlkl-201ENSMUST00000056157 2003 ntAPPRIS ALT2 TSL 1 (best) BASIC13.74□□□□□ -0.21
Trim40Q3UWA4 AC157650.3-201ENSMUST00000225058 1476 ntBASIC13.74□□□□□ -0.21
Trim40Q3UWA4 Tfe3-211ENSMUST00000137467 3390 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
Trim40Q3UWA4 Tmed9-201ENSMUST00000109905 1420 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Trim40Q3UWA4 1600014C10Rik-205ENSMUST00000178876 3283 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
Trim40Q3UWA4 Phka2-202ENSMUST00000112376 2310 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
Trim40Q3UWA4 Mrps35-201ENSMUST00000036111 4162 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Trim40Q3UWA4 Pdgfa-203ENSMUST00000110896 1363 ntAPPRIS P1 TSL 5 BASIC13.74□□□□□ -0.21
Trim40Q3UWA4 Gm4081-201ENSMUST00000195287 1838 ntBASIC13.74□□□□□ -0.21
Trim40Q3UWA4 Gm2895-201ENSMUST00000171591 3194 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
Trim40Q3UWA4 Dnm1-214ENSMUST00000201433 3146 ntAPPRIS ALT1 TSL 5 BASIC13.74□□□□□ -0.21
Trim40Q3UWA4 Sun1-202ENSMUST00000078690 2608 ntAPPRIS ALT2 TSL 5 BASIC13.74□□□□□ -0.21
Trim40Q3UWA4 Angptl7-201ENSMUST00000030840 2157 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Trim40Q3UWA4 Rnf10-203ENSMUST00000112097 3476 ntAPPRIS ALT2 TSL 1 (best) BASIC13.74□□□□□ -0.21
Trim40Q3UWA4 Ptpn11-202ENSMUST00000100770 5599 ntAPPRIS ALT1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Trim40Q3UWA4 Tpm3-205ENSMUST00000121503 1139 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Trim40Q3UWA4 Ankrd39-202ENSMUST00000194894 664 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
Trim40Q3UWA4 Hint1-201ENSMUST00000020504 636 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Trim40Q3UWA4 Hikeshi-207ENSMUST00000207309 835 ntTSL 5 BASIC13.74□□□□□ -0.21
Trim40Q3UWA4 Ccdc182-201ENSMUST00000037268 1204 ntAPPRIS P1 BASIC13.74□□□□□ -0.21
Trim40Q3UWA4 Fgf9-202ENSMUST00000074654 1198 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
Trim40Q3UWA4 CT010456.1-201ENSMUST00000222465 1688 ntTSL 5 BASIC13.74□□□□□ -0.21
Trim40Q3UWA4 Slc39a3-201ENSMUST00000059551 3680 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Trim40Q3UWA4 Unc119b-201ENSMUST00000060798 3659 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Trim40Q3UWA4 Aptx-201ENSMUST00000030119 5250 ntAPPRIS ALT2 TSL 1 (best) BASIC13.74□□□□□ -0.21
Trim40Q3UWA4 Gm29361-201ENSMUST00000183323 2000 ntBASIC13.74□□□□□ -0.21
Trim40Q3UWA4 Gars-201ENSMUST00000003572 2380 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Trim40Q3UWA4 Ssh3-202ENSMUST00000113852 2735 ntAPPRIS ALT2 TSL 1 (best) BASIC13.74□□□□□ -0.21
Trim40Q3UWA4 Ssh3-201ENSMUST00000037992 2728 ntAPPRIS P2 TSL 1 (best) BASIC13.74□□□□□ -0.21
Trim40Q3UWA4 Kctd14-201ENSMUST00000050732 2343 ntAPPRIS ALT2 TSL 1 (best) BASIC13.74□□□□□ -0.21
Trim40Q3UWA4 Klhl34-201ENSMUST00000087157 1935 ntAPPRIS P1 BASIC13.74□□□□□ -0.21
Trim40Q3UWA4 Lipe-202ENSMUST00000054301 2661 ntAPPRIS ALT2 TSL 1 (best) BASIC13.74□□□□□ -0.21
Trim40Q3UWA4 Tmc8-202ENSMUST00000106334 2644 ntAPPRIS ALT2 TSL 1 (best) BASIC13.74□□□□□ -0.21
Trim40Q3UWA4 Radil-201ENSMUST00000063635 3700 ntAPPRIS P3 TSL 1 (best) BASIC13.74□□□□□ -0.21
Trim40Q3UWA4 Sptb-201ENSMUST00000021458 10394 ntAPPRIS P2 TSL 1 (best) BASIC13.74□□□□□ -0.21
Trim40Q3UWA4 B130055M24Rik-201ENSMUST00000144796 1778 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
Trim40Q3UWA4 Ripk4-201ENSMUST00000019386 3541 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Trim40Q3UWA4 Egr1-201ENSMUST00000064795 4484 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Trim40Q3UWA4 Kcnk13-204ENSMUST00000177549 3075 ntAPPRIS P1 TSL 5 BASIC13.73□□□□□ -0.21
Trim40Q3UWA4 Olfr322-204ENSMUST00000214392 4779 ntAPPRIS P1 TSL 5 BASIC13.73□□□□□ -0.21
Trim40Q3UWA4 Glb1-201ENSMUST00000063042 2396 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Trim40Q3UWA4 Dbndd1-201ENSMUST00000176155 1677 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Trim40Q3UWA4 Crem-201ENSMUST00000025069 2931 ntTSL 5 BASIC13.73□□□□□ -0.21
Trim40Q3UWA4 Hnrnpm-202ENSMUST00000114385 2550 ntTSL 2 BASIC13.73□□□□□ -0.21
Trim40Q3UWA4 Socs3-201ENSMUST00000054002 2552 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Trim40Q3UWA4 Gm15165-201ENSMUST00000118140 502 ntBASIC13.73□□□□□ -0.21
Trim40Q3UWA4 Gm25745-201ENSMUST00000174945 133 ntBASIC13.73□□□□□ -0.21
Trim40Q3UWA4 Washc3-203ENSMUST00000182183 838 ntAPPRIS ALT2 TSL 2 BASIC13.73□□□□□ -0.21
Trim40Q3UWA4 Dnmt3a-ps1-201ENSMUST00000192011 1271 ntBASIC13.73□□□□□ -0.21
Trim40Q3UWA4 Cbr2-201ENSMUST00000026148 1110 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Trim40Q3UWA4 Ikzf5-202ENSMUST00000121033 2231 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
Trim40Q3UWA4 Ift52-201ENSMUST00000018002 2248 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Trim40Q3UWA4 Mroh1-202ENSMUST00000096385 5268 ntAPPRIS P4 TSL 1 (best) BASIC13.73□□□□□ -0.21
Trim40Q3UWA4 Ash2l-201ENSMUST00000068892 3307 ntAPPRIS P4 TSL 1 (best) BASIC13.73□□□□□ -0.21
Trim40Q3UWA4 Erc1-207ENSMUST00000183911 3865 ntTSL 5 BASIC13.73□□□□□ -0.21
Trim40Q3UWA4 B4galnt1-201ENSMUST00000006914 2395 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Trim40Q3UWA4 Dmkn-205ENSMUST00000165887 2063 ntAPPRIS ALT2 TSL 1 (best) BASIC13.73□□□□□ -0.21
Trim40Q3UWA4 Prickle3-201ENSMUST00000033485 2301 ntAPPRIS P2 TSL 1 (best) BASIC13.73□□□□□ -0.21
Trim40Q3UWA4 BC006965-201ENSMUST00000124028 1952 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Trim40Q3UWA4 Fasn-201ENSMUST00000055655 10050 ntAPPRIS P2 TSL 1 (best) BASIC13.72□□□□□ -0.21
Trim40Q3UWA4 Eloa-201ENSMUST00000030427 4708 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Trim40Q3UWA4 Arrb2-203ENSMUST00000102563 1352 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Trim40Q3UWA4 Galnt6os-201ENSMUST00000160960 1389 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Trim40Q3UWA4 Ube2f-204ENSMUST00000178627 1363 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Trim40Q3UWA4 Mgat1-202ENSMUST00000101293 2729 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Trim40Q3UWA4 Gtf2ird1-229ENSMUST00000202554 3514 ntAPPRIS ALT2 TSL 1 (best) BASIC13.72□□□□□ -0.21
Trim40Q3UWA4 Wnk1-203ENSMUST00000088644 11330 ntAPPRIS ALT2 TSL 5 BASIC13.72□□□□□ -0.21
Retrieved 100 of 76,532 protein–RNA pairs in 29 ms