Protein–RNA interactions for Protein: Q3UV31

Rnf223, RING finger protein 223, mousemouse

Predictions only

Length 285 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf223Q3UV31 Syce1l-201ENSMUST00000034219 896 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Rnf223Q3UV31 Gstp2-201ENSMUST00000042700 770 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Rnf223Q3UV31 Syce1l-202ENSMUST00000095173 791 ntAPPRIS P4 TSL 1 (best) BASIC14.2□□□□□ -0.14
Rnf223Q3UV31 Plk1-201ENSMUST00000033154 2199 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Rnf223Q3UV31 Ubr2-201ENSMUST00000113335 5691 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Rnf223Q3UV31 Cstf2-203ENSMUST00000113287 3661 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Rnf223Q3UV31 Pds5b-208ENSMUST00000202170 6598 ntAPPRIS ALT2 TSL 5 BASIC14.2□□□□□ -0.14
Rnf223Q3UV31 Disp2-202ENSMUST00000063975 1505 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Rnf223Q3UV31 Dbndd1-201ENSMUST00000176155 1677 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Rnf223Q3UV31 Rxra-202ENSMUST00000100251 1952 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Rnf223Q3UV31 Htr3a-202ENSMUST00000217289 1987 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Rnf223Q3UV31 Hdgfl1-201ENSMUST00000055915 1993 ntAPPRIS P1 BASIC14.2□□□□□ -0.14
Rnf223Q3UV31 Apba3-211ENSMUST00000220297 2268 ntAPPRIS P1 TSL 5 BASIC14.2□□□□□ -0.14
Rnf223Q3UV31 Arpin-201ENSMUST00000048731 2277 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Rnf223Q3UV31 Phf8-204ENSMUST00000112666 2556 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Rnf223Q3UV31 Brd3-203ENSMUST00000113941 5289 ntAPPRIS ALT2 TSL 5 BASIC14.2□□□□□ -0.14
Rnf223Q3UV31 Ppp1r12b-202ENSMUST00000086444 3137 ntAPPRIS P2 TSL 5 BASIC14.19□□□□□ -0.14
Rnf223Q3UV31 Stum-201ENSMUST00000136521 6506 ntAPPRIS P2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Rnf223Q3UV31 Hdac8-201ENSMUST00000087916 1936 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Rnf223Q3UV31 Lats1-202ENSMUST00000165952 7209 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Rnf223Q3UV31 Rbm7-202ENSMUST00000213276 2629 ntTSL 2 BASIC14.19□□□□□ -0.14
Rnf223Q3UV31 St6galnac2-201ENSMUST00000079545 3643 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Rnf223Q3UV31 Zmym3-208ENSMUST00000121429 1890 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Rnf223Q3UV31 Pdia2-201ENSMUST00000039113 1721 ntAPPRIS P2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Rnf223Q3UV31 4930425O10Rik-201ENSMUST00000197761 1418 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Rnf223Q3UV31 Prdm4-207ENSMUST00000220032 3962 ntTSL 5 BASIC14.19□□□□□ -0.14
Rnf223Q3UV31 Tcf3-209ENSMUST00000105345 2950 ntAPPRIS P3 TSL 1 (best) BASIC14.19□□□□□ -0.14
Rnf223Q3UV31 Msmp-201ENSMUST00000107884 743 ntAPPRIS P1 TSL 3 BASIC14.19□□□□□ -0.14
Rnf223Q3UV31 Oprl1-203ENSMUST00000108766 1241 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Rnf223Q3UV31 6430548M08Rik-204ENSMUST00000108951 5531 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Rnf223Q3UV31 Lcn6-202ENSMUST00000114197 635 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Rnf223Q3UV31 Gm16191-201ENSMUST00000141445 520 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Rnf223Q3UV31 Pam16-201ENSMUST00000014445 596 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Rnf223Q3UV31 Gm20614-201ENSMUST00000177106 632 ntBASIC14.19□□□□□ -0.14
Rnf223Q3UV31 Gm20661-203ENSMUST00000177368 900 ntAPPRIS P1 TSL 2 BASIC14.19□□□□□ -0.14
Rnf223Q3UV31 9230114J08Rik-201ENSMUST00000200375 350 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Rnf223Q3UV31 Gm39228-201ENSMUST00000212456 301 ntTSL 5 BASIC14.19□□□□□ -0.14
Rnf223Q3UV31 AC134328.1-201ENSMUST00000222693 667 ntTSL 2 BASIC14.19□□□□□ -0.14
Rnf223Q3UV31 AC090659.2-201ENSMUST00000225378 1186 ntBASIC14.19□□□□□ -0.14
Rnf223Q3UV31 Cmtm5-201ENSMUST00000037814 1095 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Rnf223Q3UV31 Hes5-201ENSMUST00000049621 1273 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Rnf223Q3UV31 Klk1b7-ps-201ENSMUST00000078897 448 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Rnf223Q3UV31 Rhox9-201ENSMUST00000089062 882 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Rnf223Q3UV31 Lrif1-202ENSMUST00000098751 929 ntTSL 2 BASIC14.19□□□□□ -0.14
Rnf223Q3UV31 Usp51-201ENSMUST00000095755 2204 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Rnf223Q3UV31 6030408B16Rik-202ENSMUST00000191426 1947 ntAPPRIS P5 TSL 1 (best) BASIC14.19□□□□□ -0.14
Rnf223Q3UV31 Camk2g-217ENSMUST00000226630 1937 ntBASIC14.19□□□□□ -0.14
Rnf223Q3UV31 Kif26a-201ENSMUST00000128402 6918 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Rnf223Q3UV31 Ndst2-202ENSMUST00000223679 3907 ntAPPRIS P1 BASIC14.19□□□□□ -0.14
Rnf223Q3UV31 Stk40-202ENSMUST00000116286 3860 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Rnf223Q3UV31 Skida1-201ENSMUST00000066885 2936 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Rnf223Q3UV31 Pbk-201ENSMUST00000022612 1720 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Rnf223Q3UV31 Papola-202ENSMUST00000109901 4380 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Rnf223Q3UV31 Atat1-203ENSMUST00000077494 1340 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Rnf223Q3UV31 Trim65-201ENSMUST00000067632 3048 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Rnf223Q3UV31 Tpcn1-201ENSMUST00000046426 4712 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Rnf223Q3UV31 Slc35c2-201ENSMUST00000017808 1843 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Rnf223Q3UV31 Gm26666-201ENSMUST00000180763 2461 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Rnf223Q3UV31 Necap2-201ENSMUST00000030760 1906 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Rnf223Q3UV31 Fam124a-201ENSMUST00000039064 3558 ntAPPRIS P1 TSL 5 BASIC14.18□□□□□ -0.14
Rnf223Q3UV31 Gm24543-201ENSMUST00000103867 82 ntBASIC14.18□□□□□ -0.14
Rnf223Q3UV31 Gm6222-201ENSMUST00000120787 396 ntBASIC14.18□□□□□ -0.14
Rnf223Q3UV31 Gm14104-201ENSMUST00000135990 356 ntTSL 5 BASIC14.18□□□□□ -0.14
Rnf223Q3UV31 Igfbp4-204ENSMUST00000140772 742 ntTSL 2 BASIC14.18□□□□□ -0.14
Rnf223Q3UV31 Gm11899-201ENSMUST00000142373 745 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Rnf223Q3UV31 Mroh1-217ENSMUST00000162319 1244 ntAPPRIS ALT2 TSL 5 BASIC14.18□□□□□ -0.14
Rnf223Q3UV31 Gm7030-203ENSMUST00000173322 913 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Rnf223Q3UV31 Smim22-206ENSMUST00000184256 381 ntTSL 3 BASIC14.18□□□□□ -0.14
Rnf223Q3UV31 Lsamp-207ENSMUST00000189229 637 ntTSL 3 BASIC14.18□□□□□ -0.14
Rnf223Q3UV31 Lsamp-210ENSMUST00000191610 1297 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Rnf223Q3UV31 Gm35911-201ENSMUST00000198837 677 ntAPPRIS P1 TSL 5 BASIC14.18□□□□□ -0.14
Rnf223Q3UV31 Gm30191-201ENSMUST00000205501 647 ntAPPRIS P1 TSL 5 BASIC14.18□□□□□ -0.14
Rnf223Q3UV31 Gm7030-201ENSMUST00000046131 913 ntAPPRIS P1 TSL 5 BASIC14.18□□□□□ -0.14
Rnf223Q3UV31 Adipor1-202ENSMUST00000112237 3446 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Rnf223Q3UV31 Fhad1-201ENSMUST00000036701 1366 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Rnf223Q3UV31 Hars-201ENSMUST00000001416 1987 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Rnf223Q3UV31 Sik2-201ENSMUST00000041375 3552 ntAPPRIS P2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Rnf223Q3UV31 Gm26534-201ENSMUST00000181687 1724 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Rnf223Q3UV31 Ppia-206ENSMUST00000213200 1450 ntTSL 5 BASIC14.18□□□□□ -0.14
Rnf223Q3UV31 Tcf3-204ENSMUST00000105340 2826 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Rnf223Q3UV31 Fkbp10-201ENSMUST00000001595 2584 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Rnf223Q3UV31 4921536K21Rik-201ENSMUST00000020712 2590 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Rnf223Q3UV31 4930429P21Rik-202ENSMUST00000194547 2061 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Rnf223Q3UV31 Gcnt4-201ENSMUST00000171324 5087 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Rnf223Q3UV31 Gm16425-201ENSMUST00000118143 3130 ntBASIC14.17□□□□□ -0.14
Rnf223Q3UV31 E530011L22Rik-201ENSMUST00000181325 5282 ntBASIC14.17□□□□□ -0.14
Rnf223Q3UV31 Ush1c-202ENSMUST00000078680 2047 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Rnf223Q3UV31 Gm26681-201ENSMUST00000180851 1440 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Rnf223Q3UV31 Slc24a3-201ENSMUST00000081121 1788 ntAPPRIS P2 TSL 5 BASIC14.17□□□□□ -0.14
Rnf223Q3UV31 Bmt2-202ENSMUST00000203078 4462 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Rnf223Q3UV31 Adgrg5-205ENSMUST00000166802 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Rnf223Q3UV31 Gm10110-201ENSMUST00000081204 1891 ntTSL 5 BASIC14.17□□□□□ -0.14
Rnf223Q3UV31 Cpz-201ENSMUST00000038676 2245 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Rnf223Q3UV31 Rsu1-202ENSMUST00000114791 1604 ntTSL 5 BASIC14.17□□□□□ -0.14
Rnf223Q3UV31 Pex11g-202ENSMUST00000111081 666 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Rnf223Q3UV31 Chchd7-208ENSMUST00000121651 620 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Rnf223Q3UV31 Gm27989-201ENSMUST00000184721 107 ntBASIC14.17□□□□□ -0.14
Rnf223Q3UV31 Mir124-2hg-206ENSMUST00000189754 525 ntTSL 3 BASIC14.17□□□□□ -0.14
Rnf223Q3UV31 Mpv17-203ENSMUST00000200833 1171 ntTSL 5 BASIC14.17□□□□□ -0.14
Rnf223Q3UV31 5430431A17Rik-201ENSMUST00000206342 795 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Retrieved 100 of 76,532 protein–RNA pairs in 42.2 ms