Protein–RNA interactions for Protein: Q3USH1

Fam196a, Protein FAM196A, mousemouse

Predictions only

Length 422 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Fam196aQ3USH1 Luc7l2-213ENSMUST00000163047 3141 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
Fam196aQ3USH1 Ehmt2-202ENSMUST00000078061 3746 ntAPPRIS ALT2 TSL 1 (best) BASIC14.62□□□□□ -0.07
Fam196aQ3USH1 Faf1-201ENSMUST00000102724 4468 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Fam196aQ3USH1 Fnip2-201ENSMUST00000076136 3775 ntAPPRIS P2 TSL 5 BASIC14.62□□□□□ -0.07
Fam196aQ3USH1 Inca1-203ENSMUST00000108542 1080 ntAPPRIS P3 TSL 1 (best) BASIC14.62□□□□□ -0.07
Fam196aQ3USH1 Glrx2-202ENSMUST00000111957 580 ntAPPRIS ALT2 TSL 1 (best) BASIC14.62□□□□□ -0.07
Fam196aQ3USH1 Prss45-201ENSMUST00000011391 1232 ntAPPRIS P2 TSL 1 (best) BASIC14.62□□□□□ -0.07
Fam196aQ3USH1 Gm13216-201ENSMUST00000117145 591 ntBASIC14.62□□□□□ -0.07
Fam196aQ3USH1 Gm14508-201ENSMUST00000127049 901 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
Fam196aQ3USH1 Gm12199-201ENSMUST00000137567 517 ntTSL 3 BASIC14.62□□□□□ -0.07
Fam196aQ3USH1 Gm11899-201ENSMUST00000142373 745 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
Fam196aQ3USH1 Pmepa1os-201ENSMUST00000150185 680 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
Fam196aQ3USH1 Pid1-204ENSMUST00000176559 1564 ntTSL 2 BASIC14.62□□□□□ -0.07
Fam196aQ3USH1 Tac2-202ENSMUST00000179960 852 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Fam196aQ3USH1 Gm27847-201ENSMUST00000183711 107 ntBASIC14.62□□□□□ -0.07
Fam196aQ3USH1 Gm27375-201ENSMUST00000183799 107 ntBASIC14.62□□□□□ -0.07
Fam196aQ3USH1 Treml1-204ENSMUST00000224001 1220 ntAPPRIS P2 BASIC14.62□□□□□ -0.07
Fam196aQ3USH1 Tac2-201ENSMUST00000026466 678 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Fam196aQ3USH1 Pspn-201ENSMUST00000002740 474 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Fam196aQ3USH1 Gm8973-201ENSMUST00000079818 315 ntAPPRIS P1 BASIC14.62□□□□□ -0.07
Fam196aQ3USH1 Rnf168-203ENSMUST00000171474 4460 ntAPPRIS P2 TSL 1 (best) BASIC14.62□□□□□ -0.07
Fam196aQ3USH1 Mpp3-201ENSMUST00000062801 2848 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Fam196aQ3USH1 Gm17315-201ENSMUST00000181408 2504 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
Fam196aQ3USH1 Sphk1-202ENSMUST00000063446 2527 ntAPPRIS ALT2 TSL 2 BASIC14.62□□□□□ -0.07
Fam196aQ3USH1 Tacc1-201ENSMUST00000084030 7788 ntAPPRIS P4 TSL 1 (best) BASIC14.62□□□□□ -0.07
Fam196aQ3USH1 Impdh1-202ENSMUST00000159124 2600 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Fam196aQ3USH1 Wnt5b-201ENSMUST00000117171 2174 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Fam196aQ3USH1 Cdc25a-201ENSMUST00000094324 3632 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Fam196aQ3USH1 Agrn-206ENSMUST00000180572 6891 ntAPPRIS P1 TSL 5 BASIC14.61□□□□□ -0.07
Fam196aQ3USH1 Arid4b-204ENSMUST00000110536 5783 ntTSL 5 BASIC14.61□□□□□ -0.07
Fam196aQ3USH1 Neu4-202ENSMUST00000190212 1719 ntAPPRIS ALT2 TSL 1 (best) BASIC14.61□□□□□ -0.07
Fam196aQ3USH1 Celf4-206ENSMUST00000224553 1729 ntBASIC14.61□□□□□ -0.07
Fam196aQ3USH1 Slain1-201ENSMUST00000069443 2863 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Fam196aQ3USH1 Mtmr12-201ENSMUST00000038172 6840 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Fam196aQ3USH1 Apbb1-212ENSMUST00000189072 2085 ntTSL 5 BASIC14.61□□□□□ -0.07
Fam196aQ3USH1 Chic2-201ENSMUST00000075452 9699 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Fam196aQ3USH1 Bcr-201ENSMUST00000164107 6839 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Fam196aQ3USH1 Ndufa13-201ENSMUST00000110167 1251 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Fam196aQ3USH1 Wisp1-202ENSMUST00000118823 708 ntTSL 5 BASIC14.61□□□□□ -0.07
Fam196aQ3USH1 Gm4691-201ENSMUST00000182339 1000 ntBASIC14.61□□□□□ -0.07
Fam196aQ3USH1 Gm27243-201ENSMUST00000183964 521 ntBASIC14.61□□□□□ -0.07
Fam196aQ3USH1 Gm2451-201ENSMUST00000199447 999 ntBASIC14.61□□□□□ -0.07
Fam196aQ3USH1 Gm10290-201ENSMUST00000200451 999 ntBASIC14.61□□□□□ -0.07
Fam196aQ3USH1 Gm7619-201ENSMUST00000210649 1282 ntBASIC14.61□□□□□ -0.07
Fam196aQ3USH1 AC155258.1-201ENSMUST00000219303 253 ntBASIC14.61□□□□□ -0.07
Fam196aQ3USH1 AC144543.1-201ENSMUST00000221840 1064 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
Fam196aQ3USH1 Oit1-201ENSMUST00000022269 1253 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Fam196aQ3USH1 CT485787.1-201ENSMUST00000225617 968 ntBASIC14.61□□□□□ -0.07
Fam196aQ3USH1 Emc4-201ENSMUST00000028551 983 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Fam196aQ3USH1 1700120B22Rik-201ENSMUST00000054837 464 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
Fam196aQ3USH1 Tpd52-201ENSMUST00000063496 697 ntTSL 2 BASIC14.61□□□□□ -0.07
Fam196aQ3USH1 Lrif1-202ENSMUST00000098751 929 ntTSL 2 BASIC14.61□□□□□ -0.07
Fam196aQ3USH1 Dnajc19-201ENSMUST00000011029 2499 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
Fam196aQ3USH1 Fbxl21-203ENSMUST00000121871 1963 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
Fam196aQ3USH1 Wfikkn1-201ENSMUST00000095487 1981 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Fam196aQ3USH1 Aqp8-201ENSMUST00000033023 1487 ntAPPRIS ALT2 TSL 1 (best) BASIC14.61□□□□□ -0.07
Fam196aQ3USH1 Trim34b-201ENSMUST00000106847 1827 ntAPPRIS P2 TSL 1 (best) BASIC14.61□□□□□ -0.07
Fam196aQ3USH1 Washc1-202ENSMUST00000116556 2887 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Fam196aQ3USH1 Lhx3-201ENSMUST00000028302 2223 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Fam196aQ3USH1 Slc9a6-202ENSMUST00000114784 4449 ntTSL 5 BASIC14.61□□□□□ -0.07
Fam196aQ3USH1 Asph-210ENSMUST00000108337 2836 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
Fam196aQ3USH1 Nrg2-203ENSMUST00000115713 3001 ntAPPRIS P1 TSL 5 BASIC14.6□□□□□ -0.07
Fam196aQ3USH1 Krt20-201ENSMUST00000017743 1927 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Fam196aQ3USH1 Fbxo5-201ENSMUST00000019907 1940 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Fam196aQ3USH1 Pi4kb-202ENSMUST00000107251 2895 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
Fam196aQ3USH1 Gm4425-201ENSMUST00000172838 2857 ntTSL 2 BASIC14.6□□□□□ -0.07
Fam196aQ3USH1 A330102I10Rik-202ENSMUST00000140415 682 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
Fam196aQ3USH1 Tmem109-207ENSMUST00000147699 1096 ntTSL 2 BASIC14.6□□□□□ -0.07
Fam196aQ3USH1 Ighv8-8-201ENSMUST00000192591 358 ntAPPRIS P1 BASIC14.6□□□□□ -0.07
Fam196aQ3USH1 Gm19710-201ENSMUST00000200257 640 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
Fam196aQ3USH1 Gm44780-201ENSMUST00000205409 581 ntTSL 3 BASIC14.6□□□□□ -0.07
Fam196aQ3USH1 Gm7561-201ENSMUST00000211203 886 ntBASIC14.6□□□□□ -0.07
Fam196aQ3USH1 Gm33460-201ENSMUST00000212286 536 ntTSL 5 BASIC14.6□□□□□ -0.07
Fam196aQ3USH1 AC153845.2-201ENSMUST00000217535 673 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
Fam196aQ3USH1 Rrp36-201ENSMUST00000024766 1195 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Fam196aQ3USH1 Tmem86b-201ENSMUST00000055085 1222 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Fam196aQ3USH1 Gm6091-201ENSMUST00000098307 165 ntBASIC14.6□□□□□ -0.07
Fam196aQ3USH1 Spdef-202ENSMUST00000114870 2070 ntAPPRIS P1 TSL 5 BASIC14.6□□□□□ -0.07
Fam196aQ3USH1 Ehmt2-204ENSMUST00000114033 3882 ntAPPRIS ALT2 TSL 1 (best) BASIC14.6□□□□□ -0.07
Fam196aQ3USH1 Itga6-201ENSMUST00000028522 4310 ntAPPRIS P3 TSL 1 (best) BASIC14.6□□□□□ -0.07
Fam196aQ3USH1 Gnas-202ENSMUST00000087871 3903 ntAPPRIS P4 TSL 1 (best) BASIC14.6□□□□□ -0.07
Fam196aQ3USH1 Srp68-202ENSMUST00000106425 2330 ntTSL 5 BASIC14.6□□□□□ -0.07
Fam196aQ3USH1 Sirt5-207ENSMUST00000221515 1793 ntTSL 5 BASIC14.6□□□□□ -0.07
Fam196aQ3USH1 Tgfb2-201ENSMUST00000045288 5116 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Fam196aQ3USH1 Lrrc47-205ENSMUST00000169622 3468 ntAPPRIS ALT2 TSL 1 (best) BASIC14.6□□□□□ -0.07
Fam196aQ3USH1 Slc4a7-201ENSMUST00000057015 8132 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Fam196aQ3USH1 Ripk1-201ENSMUST00000021844 3266 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Fam196aQ3USH1 Gm15557-201ENSMUST00000109629 1380 ntAPPRIS P1 TSL 5 BASIC14.6□□□□□ -0.07
Fam196aQ3USH1 Rbfox3-205ENSMUST00000117731 3084 ntAPPRIS ALT2 TSL 1 (best) BASIC14.6□□□□□ -0.07
Fam196aQ3USH1 Dmkn-204ENSMUST00000085691 2007 ntAPPRIS P4 TSL 1 (best) BASIC14.59□□□□□ -0.07
Fam196aQ3USH1 Aire-216ENSMUST00000156417 1627 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
Fam196aQ3USH1 Tm9sf1-205ENSMUST00000122358 2517 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Fam196aQ3USH1 Anks1b-202ENSMUST00000099366 2549 ntTSL 5 BASIC14.59□□□□□ -0.07
Fam196aQ3USH1 Cyp2f2-201ENSMUST00000003100 1866 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Fam196aQ3USH1 Slc6a17-208ENSMUST00000169449 6322 ntAPPRIS ALT1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Fam196aQ3USH1 Slc6a17-201ENSMUST00000029499 6308 ntAPPRIS P3 TSL 1 (best) BASIC14.59□□□□□ -0.07
Fam196aQ3USH1 Fam133b-205ENSMUST00000197082 1943 ntAPPRIS ALT2 TSL 5 BASIC14.59□□□□□ -0.07
Fam196aQ3USH1 Ptprs-211ENSMUST00000223859 5588 ntBASIC14.59□□□□□ -0.07
Fam196aQ3USH1 Tmem108-204ENSMUST00000189588 2850 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Fam196aQ3USH1 Bcar1-201ENSMUST00000166232 3142 ntAPPRIS P3 TSL 1 (best) BASIC14.59□□□□□ -0.07
Retrieved 100 of 76,532 protein–RNA pairs in 29 ms