Protein–RNA interactions for Protein: Q3US17

Znf48, Zinc finger protein 48, mousemouse

Predictions only

Length 591 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Znf48Q3US17 Zfp362-201ENSMUST00000071108 2674 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Znf48Q3US17 Zfp612-202ENSMUST00000212754 4863 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Znf48Q3US17 Trp53bp2-201ENSMUST00000117245 4361 ntAPPRIS P1 TSL 5 BASIC12.16□□□□□ -0.46
Znf48Q3US17 Chga-201ENSMUST00000021610 1883 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Znf48Q3US17 Ush1c-202ENSMUST00000078680 2047 ntAPPRIS ALT2 TSL 1 (best) BASIC12.16□□□□□ -0.46
Znf48Q3US17 Sesn1-201ENSMUST00000041438 2600 ntAPPRIS P3 TSL 1 (best) BASIC12.16□□□□□ -0.46
Znf48Q3US17 Gm37728-201ENSMUST00000195025 2292 ntBASIC12.16□□□□□ -0.46
Znf48Q3US17 Large2-201ENSMUST00000068586 2445 ntAPPRIS P3 TSL 1 (best) BASIC12.16□□□□□ -0.46
Znf48Q3US17 Retreg3-201ENSMUST00000017946 3165 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Znf48Q3US17 Dnm1l-203ENSMUST00000115749 4068 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Znf48Q3US17 Dnm1l-202ENSMUST00000096229 4056 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Znf48Q3US17 Usp19-201ENSMUST00000006854 4791 ntAPPRIS P3 TSL 1 (best) BASIC12.15□□□□□ -0.46
Znf48Q3US17 Mylk2-201ENSMUST00000028970 2951 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Znf48Q3US17 Prrg2-208ENSMUST00000210690 1623 ntAPPRIS P2 TSL 1 (best) BASIC12.15□□□□□ -0.46
Znf48Q3US17 Phyhd1-204ENSMUST00000113645 1325 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Znf48Q3US17 Cdhr5-202ENSMUST00000167263 2628 ntAPPRIS ALT2 TSL 1 (best) BASIC12.15□□□□□ -0.46
Znf48Q3US17 Wdr47-201ENSMUST00000051145 4222 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Znf48Q3US17 Rgs9-202ENSMUST00000103062 1743 ntTSL 5 BASIC12.15□□□□□ -0.46
Znf48Q3US17 Wwox-207ENSMUST00000160862 1715 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Znf48Q3US17 Mafg-203ENSMUST00000106181 840 ntAPPRIS P1 TSL 3 BASIC12.15□□□□□ -0.46
Znf48Q3US17 Acvr1c-203ENSMUST00000112607 1266 ntTSL 5 BASIC12.15□□□□□ -0.46
Znf48Q3US17 Rhox2d-201ENSMUST00000115179 685 ntAPPRIS P1 TSL 5 BASIC12.15□□□□□ -0.46
Znf48Q3US17 Gm11185-201ENSMUST00000117732 1007 ntBASIC12.15□□□□□ -0.46
Znf48Q3US17 Chchd7-208ENSMUST00000121651 620 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Znf48Q3US17 Tspan5-203ENSMUST00000121826 1114 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Znf48Q3US17 Slc38a6-204ENSMUST00000126488 589 ntTSL 5 BASIC12.15□□□□□ -0.46
Znf48Q3US17 Tbata-210ENSMUST00000151886 915 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Znf48Q3US17 Runx2os2-201ENSMUST00000161664 818 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Znf48Q3US17 Mir6404-201ENSMUST00000183699 94 ntBASIC12.15□□□□□ -0.46
Znf48Q3US17 2810405F17Rik-201ENSMUST00000189334 1117 ntBASIC12.15□□□□□ -0.46
Znf48Q3US17 Gm7787-201ENSMUST00000216858 688 ntBASIC12.15□□□□□ -0.46
Znf48Q3US17 Alkbh7-201ENSMUST00000002737 917 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Znf48Q3US17 Chchd7-201ENSMUST00000041122 672 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Znf48Q3US17 Cmtm8-201ENSMUST00000047013 1064 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Znf48Q3US17 Smoc2-201ENSMUST00000024660 2832 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Znf48Q3US17 Kifc3-203ENSMUST00000169748 3384 ntAPPRIS ALT2 TSL 1 (best) BASIC12.15□□□□□ -0.46
Znf48Q3US17 Arhgef40-201ENSMUST00000093813 5621 ntAPPRIS P4 TSL 1 (best) BASIC12.15□□□□□ -0.46
Znf48Q3US17 Foxj3-201ENSMUST00000044564 4789 ntAPPRIS P3 TSL 1 (best) BASIC12.15□□□□□ -0.46
Znf48Q3US17 Slc48a1-201ENSMUST00000117892 2536 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Znf48Q3US17 Agfg1-204ENSMUST00000186302 2352 ntAPPRIS ALT1 TSL 5 BASIC12.15□□□□□ -0.46
Znf48Q3US17 Sybu-203ENSMUST00000110269 2920 ntAPPRIS ALT2 TSL 1 (best) BASIC12.15□□□□□ -0.46
Znf48Q3US17 Emx2-201ENSMUST00000062216 2916 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Znf48Q3US17 Hmgb3-201ENSMUST00000015361 1544 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Znf48Q3US17 Tjp2-201ENSMUST00000099558 4591 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Znf48Q3US17 Gtf2ird1-205ENSMUST00000100654 3156 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Znf48Q3US17 Trnt1-203ENSMUST00000113248 1398 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Znf48Q3US17 Atat1-214ENSMUST00000149277 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC12.15□□□□□ -0.46
Znf48Q3US17 Gabrd-201ENSMUST00000030925 1921 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Znf48Q3US17 Pcdhga12-201ENSMUST00000044851 5080 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Znf48Q3US17 Setd1b-206ENSMUST00000174836 7515 ntAPPRIS ALT2 TSL 5 BASIC12.15□□□□□ -0.46
Znf48Q3US17 Tmem81-202ENSMUST00000188789 1751 ntAPPRIS P1 BASIC12.15□□□□□ -0.46
Znf48Q3US17 Rbbp9-201ENSMUST00000028915 2170 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.47
Znf48Q3US17 Mast2-201ENSMUST00000003908 5445 ntAPPRIS ALT2 TSL 1 (best) BASIC12.15□□□□□ -0.47
Znf48Q3US17 B230217O12Rik-201ENSMUST00000181921 1642 ntTSL 1 (best) BASIC12.15□□□□□ -0.47
Znf48Q3US17 Slc35c2-204ENSMUST00000109300 2008 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.47
Znf48Q3US17 Zbtb46-205ENSMUST00000180222 2014 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.47
Znf48Q3US17 Gpr146-201ENSMUST00000051293 4157 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.47
Znf48Q3US17 Pofut2-201ENSMUST00000020493 2290 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Znf48Q3US17 Cep164-204ENSMUST00000213154 6105 ntAPPRIS ALT2 TSL 5 BASIC12.14□□□□□ -0.47
Znf48Q3US17 Ube3b-201ENSMUST00000074002 5194 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Znf48Q3US17 9130401M01Rik-201ENSMUST00000100655 1341 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Znf48Q3US17 Arid3a-202ENSMUST00000105376 4892 ntAPPRIS P3 TSL 1 (best) BASIC12.14□□□□□ -0.47
Znf48Q3US17 Poc1b-204ENSMUST00000159990 3449 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Znf48Q3US17 Gtf2e2-201ENSMUST00000167264 1566 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Znf48Q3US17 Raet1e-204ENSMUST00000181645 1579 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Znf48Q3US17 Tstd3-201ENSMUST00000029915 1588 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Znf48Q3US17 Iqcd-201ENSMUST00000069259 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC12.14□□□□□ -0.47
Znf48Q3US17 Lhx3-201ENSMUST00000028302 2223 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Znf48Q3US17 Slc13a3-201ENSMUST00000029208 3524 ntAPPRIS P2 TSL 1 (best) BASIC12.14□□□□□ -0.47
Znf48Q3US17 Mrps35-201ENSMUST00000036111 4162 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Znf48Q3US17 Men1-204ENSMUST00000113500 2742 ntAPPRIS P2 TSL 5 BASIC12.14□□□□□ -0.47
Znf48Q3US17 Wscd1-202ENSMUST00000108510 2956 ntAPPRIS P1 TSL 5 BASIC12.14□□□□□ -0.47
Znf48Q3US17 Islr2-201ENSMUST00000114144 3880 ntAPPRIS P3 TSL 2 BASIC12.14□□□□□ -0.47
Znf48Q3US17 AC132265.1-201ENSMUST00000219233 1665 ntBASIC12.14□□□□□ -0.47
Znf48Q3US17 Camta2-203ENSMUST00000108544 4632 ntAPPRIS ALT2 TSL 1 (best) BASIC12.14□□□□□ -0.47
Znf48Q3US17 Prdm4-207ENSMUST00000220032 3962 ntTSL 5 BASIC12.14□□□□□ -0.47
Znf48Q3US17 Hells-201ENSMUST00000025965 5868 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Znf48Q3US17 Gm13375-201ENSMUST00000126967 854 ntTSL 2 BASIC12.14□□□□□ -0.47
Znf48Q3US17 Cby3-202ENSMUST00000164067 731 ntAPPRIS P1 TSL 5 BASIC12.14□□□□□ -0.47
Znf48Q3US17 Gm26854-201ENSMUST00000180418 705 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Znf48Q3US17 Gm5745-201ENSMUST00000183748 313 ntBASIC12.14□□□□□ -0.47
Znf48Q3US17 Mir7036b-201ENSMUST00000184791 63 ntBASIC12.14□□□□□ -0.47
Znf48Q3US17 Gm28707-201ENSMUST00000186134 558 ntTSL 3 BASIC12.14□□□□□ -0.47
Znf48Q3US17 Tspyl-ps-201ENSMUST00000220692 1117 ntBASIC12.14□□□□□ -0.47
Znf48Q3US17 4930428E07Rik-201ENSMUST00000222132 920 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Znf48Q3US17 Cep126-201ENSMUST00000037397 3819 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Znf48Q3US17 Rnaseh2a-201ENSMUST00000065049 1006 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Znf48Q3US17 Matn1-201ENSMUST00000102576 2001 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Znf48Q3US17 Ccdc137-201ENSMUST00000058370 2778 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Znf48Q3US17 Kdm2b-201ENSMUST00000031435 3532 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Znf48Q3US17 Lmf1-202ENSMUST00000116641 1858 ntAPPRIS P2 TSL 5 BASIC12.14□□□□□ -0.47
Znf48Q3US17 Klhl26-204ENSMUST00000209567 2615 ntTSL 3 BASIC12.14□□□□□ -0.47
Znf48Q3US17 Fam126b-201ENSMUST00000038372 2385 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Znf48Q3US17 Lmf1-201ENSMUST00000063344 1861 ntAPPRIS ALT2 TSL 5 BASIC12.14□□□□□ -0.47
Znf48Q3US17 Fam76b-201ENSMUST00000059579 3702 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Znf48Q3US17 Irx3os-201ENSMUST00000062522 2988 ntTSL 5 BASIC12.14□□□□□ -0.47
Znf48Q3US17 Gm45779-201ENSMUST00000212189 4064 ntBASIC12.14□□□□□ -0.47
Znf48Q3US17 Syngr3-201ENSMUST00000007236 1965 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Znf48Q3US17 Sacm1l-201ENSMUST00000026270 3558 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Znf48Q3US17 Slc41a1-201ENSMUST00000086559 4697 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Retrieved 100 of 76,532 protein–RNA pairs in 52.4 ms