Protein–RNA interactions for Protein: Q3UPH7

Arhgef40, Rho guanine nucleotide exchange factor 40, mousemouse

Predictions only

Length 1,517 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Arhgef40Q3UPH7 Strn4-202ENSMUST00000108495 3082 ntAPPRIS ALT2 TSL 1 (best) BASIC21.2■□□□□ 0.98
Arhgef40Q3UPH7 Ttc34-203ENSMUST00000207854 4733 ntAPPRIS ALT2 TSL 5 BASIC21.2■□□□□ 0.98
Arhgef40Q3UPH7 4933417O13Rik-202ENSMUST00000208893 1571 ntTSL 5 BASIC21.2■□□□□ 0.98
Arhgef40Q3UPH7 Rab11fip3-202ENSMUST00000120691 5103 ntAPPRIS ALT2 TSL 1 (best) BASIC21.2■□□□□ 0.98
Arhgef40Q3UPH7 Cyp2ab1-205ENSMUST00000182741 1497 ntAPPRIS P1 TSL 5 BASIC21.2■□□□□ 0.98
Arhgef40Q3UPH7 Des-201ENSMUST00000027409 3028 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Arhgef40Q3UPH7 Rragd-201ENSMUST00000029946 5055 ntTSL 5 BASIC21.2■□□□□ 0.98
Arhgef40Q3UPH7 Tssc4-202ENSMUST00000105920 895 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
Arhgef40Q3UPH7 Mrps10-202ENSMUST00000119841 1113 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
Arhgef40Q3UPH7 Mir1894-201ENSMUST00000122802 81 ntBASIC21.19■□□□□ 0.98
Arhgef40Q3UPH7 Gm17232-201ENSMUST00000164515 453 ntTSL 2 BASIC21.19■□□□□ 0.98
Arhgef40Q3UPH7 Gm26847-201ENSMUST00000180407 2109 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
Arhgef40Q3UPH7 Ighv8-14-201ENSMUST00000196781 358 ntBASIC21.19■□□□□ 0.98
Arhgef40Q3UPH7 Ndufs6-201ENSMUST00000022097 568 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Arhgef40Q3UPH7 Eps8-201ENSMUST00000058210 4567 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Arhgef40Q3UPH7 Rbm42-201ENSMUST00000042726 1784 ntAPPRIS P2 TSL 1 (best) BASIC21.19■□□□□ 0.98
Arhgef40Q3UPH7 Qsox1-207ENSMUST00000194632 2433 ntAPPRIS ALT2 TSL 1 (best) BASIC21.19■□□□□ 0.98
Arhgef40Q3UPH7 Mapk8-201ENSMUST00000022504 2587 ntAPPRIS P5 TSL 1 (best) BASIC21.19■□□□□ 0.98
Arhgef40Q3UPH7 Adck5-207ENSMUST00000160784 1998 ntTSL 5 BASIC21.19■□□□□ 0.98
Arhgef40Q3UPH7 Men1-207ENSMUST00000113503 1851 ntAPPRIS ALT2 TSL 5 BASIC21.19■□□□□ 0.98
Arhgef40Q3UPH7 Srrm1-208ENSMUST00000136342 3152 ntAPPRIS P3 TSL 5 BASIC21.19■□□□□ 0.98
Arhgef40Q3UPH7 Nrxn2-201ENSMUST00000077182 6059 ntAPPRIS ALT2 TSL 5 BASIC21.19■□□□□ 0.98
Arhgef40Q3UPH7 Ppp1r18-206ENSMUST00000190496 1395 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
Arhgef40Q3UPH7 Camk2g-217ENSMUST00000226630 1937 ntBASIC21.19■□□□□ 0.98
Arhgef40Q3UPH7 Csgalnact2-201ENSMUST00000049344 3661 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Arhgef40Q3UPH7 3110009E18Rik-203ENSMUST00000112644 488 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Arhgef40Q3UPH7 Smim5-201ENSMUST00000131566 700 ntTSL 2 BASIC21.19■□□□□ 0.98
Arhgef40Q3UPH7 Gm27839-201ENSMUST00000184242 106 ntBASIC21.19■□□□□ 0.98
Arhgef40Q3UPH7 4930438A08Rik-202ENSMUST00000208022 918 ntTSL 5 BASIC21.19■□□□□ 0.98
Arhgef40Q3UPH7 Eci2-211ENSMUST00000171229 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC21.19■□□□□ 0.98
Arhgef40Q3UPH7 Clec4g-201ENSMUST00000058040 1441 ntTSL 5 BASIC21.19■□□□□ 0.98
Arhgef40Q3UPH7 Gatd1-201ENSMUST00000106008 1898 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Arhgef40Q3UPH7 Tbc1d16-203ENSMUST00000207655 2855 ntAPPRIS ALT2 TSL 1 (best) BASIC21.18■□□□□ 0.98
Arhgef40Q3UPH7 Ube2d3-208ENSMUST00000197134 2493 ntAPPRIS ALT1 TSL 5 BASIC21.18■□□□□ 0.98
Arhgef40Q3UPH7 Rragd-203ENSMUST00000098190 5008 ntAPPRIS P1 TSL 2 BASIC21.18■□□□□ 0.98
Arhgef40Q3UPH7 Chst10-206ENSMUST00000194361 2996 ntAPPRIS ALT2 TSL 1 (best) BASIC21.18■□□□□ 0.98
Arhgef40Q3UPH7 Gm14451-201ENSMUST00000121581 1542 ntBASIC21.18■□□□□ 0.98
Arhgef40Q3UPH7 Gm4081-201ENSMUST00000195287 1838 ntBASIC21.18■□□□□ 0.98
Arhgef40Q3UPH7 Saa1-201ENSMUST00000128088 609 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Arhgef40Q3UPH7 C430049B03Rik-201ENSMUST00000129764 868 ntTSL 3 BASIC21.18■□□□□ 0.98
Arhgef40Q3UPH7 Gm26464-201ENSMUST00000157094 305 ntBASIC21.18■□□□□ 0.98
Arhgef40Q3UPH7 Gm6244-201ENSMUST00000178732 841 ntBASIC21.18■□□□□ 0.98
Arhgef40Q3UPH7 Gm19078-201ENSMUST00000206311 727 ntBASIC21.18■□□□□ 0.98
Arhgef40Q3UPH7 Tdrp-206ENSMUST00000210414 323 ntTSL 3 BASIC21.18■□□□□ 0.98
Arhgef40Q3UPH7 Gm18027-201ENSMUST00000218947 619 ntBASIC21.18■□□□□ 0.98
Arhgef40Q3UPH7 Rps21-201ENSMUST00000059080 394 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Arhgef40Q3UPH7 6430531B16Rik-201ENSMUST00000097970 1161 ntAPPRIS P3 TSL 1 (best) BASIC21.18■□□□□ 0.98
Arhgef40Q3UPH7 Nat6-201ENSMUST00000093785 2053 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Arhgef40Q3UPH7 Tmf1-201ENSMUST00000095664 5732 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Arhgef40Q3UPH7 Tex13b-201ENSMUST00000044179 2116 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Arhgef40Q3UPH7 Slc5a5-201ENSMUST00000000809 2928 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Arhgef40Q3UPH7 Cfap157-201ENSMUST00000102813 1730 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Arhgef40Q3UPH7 Dlk1-205ENSMUST00000109844 1703 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Arhgef40Q3UPH7 Gm11732-201ENSMUST00000151381 1742 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
Arhgef40Q3UPH7 Ina-201ENSMUST00000037636 3240 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Arhgef40Q3UPH7 Hdgfl3-202ENSMUST00000107305 5887 ntAPPRIS P2 TSL 1 (best) BASIC21.17■□□□□ 0.98
Arhgef40Q3UPH7 Dennd3-201ENSMUST00000043414 5299 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Arhgef40Q3UPH7 Opn1sw-203ENSMUST00000147483 1426 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
Arhgef40Q3UPH7 Gldc-201ENSMUST00000025778 3754 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Arhgef40Q3UPH7 Ier5-201ENSMUST00000055322 3276 ntAPPRIS P1 BASIC21.17■□□□□ 0.98
Arhgef40Q3UPH7 Prkcd-207ENSMUST00000112210 2777 ntAPPRIS P3 TSL 1 (best) BASIC21.17■□□□□ 0.98
Arhgef40Q3UPH7 Gm27892-201ENSMUST00000185017 106 ntBASIC21.17■□□□□ 0.98
Arhgef40Q3UPH7 Gm37753-201ENSMUST00000192178 439 ntTSL 2 BASIC21.17■□□□□ 0.98
Arhgef40Q3UPH7 Mrps17-201ENSMUST00000042191 832 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Arhgef40Q3UPH7 Ttr-201ENSMUST00000075312 1219 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Arhgef40Q3UPH7 Enah-205ENSMUST00000177811 4231 ntAPPRIS ALT2 TSL 5 BASIC21.17■□□□□ 0.98
Arhgef40Q3UPH7 Sbds-201ENSMUST00000026387 1548 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Arhgef40Q3UPH7 Gba2-201ENSMUST00000030189 3544 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Arhgef40Q3UPH7 Daxx-208ENSMUST00000174541 2325 ntAPPRIS ALT2 TSL 5 BASIC21.16■□□□□ 0.98
Arhgef40Q3UPH7 Mief1-202ENSMUST00000166030 2712 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Arhgef40Q3UPH7 Fundc1-201ENSMUST00000026016 1983 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Arhgef40Q3UPH7 Tars2-204ENSMUST00000163530 2157 ntAPPRIS ALT2 TSL 1 (best) BASIC21.16■□□□□ 0.98
Arhgef40Q3UPH7 Ypel3-202ENSMUST00000106356 785 ntAPPRIS P1 TSL 5 BASIC21.16■□□□□ 0.98
Arhgef40Q3UPH7 Dpy30-202ENSMUST00000164832 799 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Arhgef40Q3UPH7 Pde7b-205ENSMUST00000169404 1697 ntAPPRIS ALT2 TSL 5 BASIC21.16■□□□□ 0.98
Arhgef40Q3UPH7 Camk2b-208ENSMUST00000109812 1875 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
Arhgef40Q3UPH7 Bckdha-201ENSMUST00000071329 1899 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Arhgef40Q3UPH7 Bet1l-201ENSMUST00000026557 2268 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Arhgef40Q3UPH7 A330074K22Rik-201ENSMUST00000183235 2489 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
Arhgef40Q3UPH7 Efs-202ENSMUST00000227037 2540 ntBASIC21.16■□□□□ 0.98
Arhgef40Q3UPH7 Med4-201ENSMUST00000022705 1328 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Arhgef40Q3UPH7 Nubpl-201ENSMUST00000040090 2987 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Arhgef40Q3UPH7 Mri1-203ENSMUST00000126435 2819 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Arhgef40Q3UPH7 Slc25a22-201ENSMUST00000019226 2811 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Arhgef40Q3UPH7 Ocln-205ENSMUST00000160859 2443 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Arhgef40Q3UPH7 Fn3k-202ENSMUST00000092302 1803 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
Arhgef40Q3UPH7 Dixdc1-202ENSMUST00000117093 1613 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
Arhgef40Q3UPH7 Ssr1-204ENSMUST00000225319 1610 ntBASIC21.16■□□□□ 0.98
Arhgef40Q3UPH7 Tomm34-202ENSMUST00000109384 1923 ntAPPRIS ALT1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Arhgef40Q3UPH7 Tead4-201ENSMUST00000006311 3076 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
Arhgef40Q3UPH7 Ptgs1-201ENSMUST00000062069 2867 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Arhgef40Q3UPH7 Ptp4a1-202ENSMUST00000076587 2851 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Arhgef40Q3UPH7 Gm13185-201ENSMUST00000131044 944 ntTSL 3 BASIC21.15■□□□□ 0.98
Arhgef40Q3UPH7 Pax5-206ENSMUST00000134968 969 ntTSL 5 BASIC21.15■□□□□ 0.98
Arhgef40Q3UPH7 Gm8835-201ENSMUST00000173096 1169 ntBASIC21.15■□□□□ 0.98
Arhgef40Q3UPH7 Gm3893-201ENSMUST00000178882 909 ntAPPRIS P1 TSL 5 BASIC21.15■□□□□ 0.98
Arhgef40Q3UPH7 AC139350.3-201ENSMUST00000226151 420 ntBASIC21.15■□□□□ 0.98
Arhgef40Q3UPH7 Rffl-202ENSMUST00000071152 3633 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
Arhgef40Q3UPH7 Cgn-203ENSMUST00000153263 2210 ntTSL 2 BASIC21.15■□□□□ 0.98
Arhgef40Q3UPH7 Syncrip-209ENSMUST00000174361 1767 ntTSL 5 BASIC21.15■□□□□ 0.98
Retrieved 100 of 76,532 protein–RNA pairs in 36.8 ms