Protein–RNA interactions for Protein: Q3TL54

Trim43a, Tripartite motif-containing protein 43A, mousemouse

Predictions only

Length 445 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim43aQ3TL54 Arhgef25-202ENSMUST00000167353 2189 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
Trim43aQ3TL54 Gm10710-201ENSMUST00000047876 3971 ntBASIC15.53■□□□□ 0.08
Trim43aQ3TL54 A930033H14Rik-201ENSMUST00000170048 2969 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Trim43aQ3TL54 Arhgap40-203ENSMUST00000165398 2028 ntAPPRIS P1 TSL 5 BASIC15.53■□□□□ 0.08
Trim43aQ3TL54 Pid1-204ENSMUST00000176559 1564 ntTSL 2 BASIC15.53■□□□□ 0.08
Trim43aQ3TL54 Ccnj-201ENSMUST00000025983 3819 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Trim43aQ3TL54 Kctd14-201ENSMUST00000050732 2343 ntAPPRIS ALT2 TSL 1 (best) BASIC15.52■□□□□ 0.08
Trim43aQ3TL54 Ppia-206ENSMUST00000213200 1450 ntTSL 5 BASIC15.52■□□□□ 0.08
Trim43aQ3TL54 Gm10110-201ENSMUST00000081204 1891 ntTSL 5 BASIC15.52■□□□□ 0.08
Trim43aQ3TL54 Lrrc14-210ENSMUST00000155735 2286 ntAPPRIS P1 TSL 5 BASIC15.52■□□□□ 0.08
Trim43aQ3TL54 Shd-202ENSMUST00000223629 1430 ntAPPRIS P2 BASIC15.52■□□□□ 0.08
Trim43aQ3TL54 Shank3-201ENSMUST00000039074 7131 ntAPPRIS P2 TSL 1 (best) BASIC15.52■□□□□ 0.08
Trim43aQ3TL54 Clcc1-201ENSMUST00000029483 2224 ntAPPRIS P3 TSL 5 BASIC15.52■□□□□ 0.08
Trim43aQ3TL54 Tmc8-202ENSMUST00000106334 2644 ntAPPRIS ALT2 TSL 1 (best) BASIC15.52■□□□□ 0.08
Trim43aQ3TL54 Mast2-201ENSMUST00000003908 5445 ntAPPRIS ALT2 TSL 1 (best) BASIC15.52■□□□□ 0.08
Trim43aQ3TL54 Fbrs-202ENSMUST00000205432 4166 ntAPPRIS ALT2 TSL 5 BASIC15.52■□□□□ 0.08
Trim43aQ3TL54 Smo-201ENSMUST00000001812 3779 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Trim43aQ3TL54 Gstt2-201ENSMUST00000038257 1370 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Trim43aQ3TL54 Amn1-201ENSMUST00000095319 1369 ntAPPRIS ALT2 TSL 1 (best) BASIC15.52■□□□□ 0.08
Trim43aQ3TL54 Fbxw7-204ENSMUST00000107679 4473 ntAPPRIS ALT1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Trim43aQ3TL54 Ino80-202ENSMUST00000110808 3928 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
Trim43aQ3TL54 Gm43056-201ENSMUST00000197865 2791 ntBASIC15.52■□□□□ 0.08
Trim43aQ3TL54 Camta1-203ENSMUST00000105668 4962 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
Trim43aQ3TL54 Hp1bp3-202ENSMUST00000097836 3113 ntAPPRIS ALT2 TSL 1 (best) BASIC15.52■□□□□ 0.08
Trim43aQ3TL54 Txndc11-202ENSMUST00000118362 4248 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
Trim43aQ3TL54 Nfs1-202ENSMUST00000109600 709 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
Trim43aQ3TL54 Trmt112-ps2-201ENSMUST00000117987 378 ntBASIC15.52■□□□□ 0.08
Trim43aQ3TL54 Tpi-rs2-201ENSMUST00000182471 756 ntBASIC15.52■□□□□ 0.08
Trim43aQ3TL54 Atp5o-201ENSMUST00000023677 838 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Trim43aQ3TL54 Cort-201ENSMUST00000030815 677 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Trim43aQ3TL54 Dpp3-201ENSMUST00000025851 2683 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
Trim43aQ3TL54 Adra1b-204ENSMUST00000167574 3047 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
Trim43aQ3TL54 Pglyrp2-201ENSMUST00000114455 1915 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
Trim43aQ3TL54 Klhl12-203ENSMUST00000116528 3277 ntAPPRIS P1 TSL 5 BASIC15.52■□□□□ 0.07
Trim43aQ3TL54 Edem3-201ENSMUST00000059498 6327 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
Trim43aQ3TL54 Gm39244-202ENSMUST00000210837 1857 ntTSL 5 BASIC15.52■□□□□ 0.07
Trim43aQ3TL54 Specc1-209ENSMUST00000201671 2523 ntTSL 5 BASIC15.52■□□□□ 0.07
Trim43aQ3TL54 Nrip2-202ENSMUST00000120405 1468 ntTSL 2 BASIC15.52■□□□□ 0.07
Trim43aQ3TL54 9330020H09Rik-201ENSMUST00000163781 2147 ntTSL 2 BASIC15.52■□□□□ 0.07
Trim43aQ3TL54 Wnt3a-201ENSMUST00000010044 2761 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
Trim43aQ3TL54 Slc8a3-201ENSMUST00000064594 4379 ntAPPRIS ALT1 TSL 5 BASIC15.52■□□□□ 0.07
Trim43aQ3TL54 AC126250.1-201ENSMUST00000228343 1768 ntBASIC15.52■□□□□ 0.07
Trim43aQ3TL54 Ctps-201ENSMUST00000030381 2705 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
Trim43aQ3TL54 Gm10125-203ENSMUST00000161096 3493 ntTSL 3 BASIC15.51■□□□□ 0.07
Trim43aQ3TL54 Camk2b-209ENSMUST00000109813 4023 ntAPPRIS P2 TSL 1 (best) BASIC15.51■□□□□ 0.07
Trim43aQ3TL54 Camk2b-204ENSMUST00000090443 4004 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
Trim43aQ3TL54 Plscr3-201ENSMUST00000019605 1927 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Trim43aQ3TL54 Pramel1-201ENSMUST00000037419 2794 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Trim43aQ3TL54 Magi1-208ENSMUST00000204347 7929 ntAPPRIS ALT2 TSL 1 (best) BASIC15.51■□□□□ 0.07
Trim43aQ3TL54 Plekhn1-201ENSMUST00000105569 3014 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Trim43aQ3TL54 2810402E24Rik-201ENSMUST00000190699 3040 ntBASIC15.51■□□□□ 0.07
Trim43aQ3TL54 Mfsd1-201ENSMUST00000029344 3011 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Trim43aQ3TL54 Nup62-203ENSMUST00000207103 2414 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Trim43aQ3TL54 0610010K14Rik-204ENSMUST00000102569 778 ntAPPRIS P3 TSL 1 (best) BASIC15.51■□□□□ 0.07
Trim43aQ3TL54 Park7-203ENSMUST00000105674 937 ntAPPRIS P1 TSL 5 BASIC15.51■□□□□ 0.07
Trim43aQ3TL54 Ndufb6-202ENSMUST00000108108 480 ntTSL 3 BASIC15.51■□□□□ 0.07
Trim43aQ3TL54 Mdk-204ENSMUST00000111309 771 ntAPPRIS P1 TSL 2 BASIC15.51■□□□□ 0.07
Trim43aQ3TL54 Gm26549-201ENSMUST00000181112 1209 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
Trim43aQ3TL54 Tmem270-202ENSMUST00000201316 847 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Trim43aQ3TL54 Zfp747-202ENSMUST00000205832 618 ntTSL 3 BASIC15.51■□□□□ 0.07
Trim43aQ3TL54 Spata33-204ENSMUST00000212346 715 ntTSL 2 BASIC15.51■□□□□ 0.07
Trim43aQ3TL54 CT010506.4-201ENSMUST00000225457 351 ntBASIC15.51■□□□□ 0.07
Trim43aQ3TL54 Stx5a-202ENSMUST00000073430 2112 ntAPPRIS P2 TSL 1 (best) BASIC15.51■□□□□ 0.07
Trim43aQ3TL54 D930028M14Rik-201ENSMUST00000098678 1003 ntTSL 2 BASIC15.51■□□□□ 0.07
Trim43aQ3TL54 Gm26852-201ENSMUST00000180691 5751 ntTSL 5 BASIC15.51■□□□□ 0.07
Trim43aQ3TL54 Cnksr2-202ENSMUST00000112513 4471 ntTSL 5 BASIC15.51■□□□□ 0.07
Trim43aQ3TL54 Rcbtb1-202ENSMUST00000043227 3903 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Trim43aQ3TL54 Loxl2-202ENSMUST00000100420 3042 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Trim43aQ3TL54 Vasp-201ENSMUST00000032561 2215 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Trim43aQ3TL54 Ccnt2-202ENSMUST00000112570 4511 ntAPPRIS ALT2 TSL 1 (best) BASIC15.51■□□□□ 0.07
Trim43aQ3TL54 Ccdc157-202ENSMUST00000101626 5153 ntAPPRIS P3 TSL 1 (best) BASIC15.5■□□□□ 0.07
Trim43aQ3TL54 Scarf1-202ENSMUST00000118243 2617 ntAPPRIS ALT2 TSL 1 (best) BASIC15.5■□□□□ 0.07
Trim43aQ3TL54 Cobll1-201ENSMUST00000090896 4867 ntAPPRIS ALT2 TSL 1 (best) BASIC15.5■□□□□ 0.07
Trim43aQ3TL54 Mindy3-201ENSMUST00000028105 2344 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Trim43aQ3TL54 Rfx5-203ENSMUST00000107254 4450 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
Trim43aQ3TL54 Lrrc25-201ENSMUST00000052437 1313 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Trim43aQ3TL54 Pcdha8-201ENSMUST00000194038 5338 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Trim43aQ3TL54 Ntng2-201ENSMUST00000048455 1770 ntAPPRIS P4 TSL 1 (best) BASIC15.5■□□□□ 0.07
Trim43aQ3TL54 Gata4-201ENSMUST00000067417 3400 ntAPPRIS ALT2 TSL 1 (best) BASIC15.5■□□□□ 0.07
Trim43aQ3TL54 Gm26547-201ENSMUST00000181186 1508 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
Trim43aQ3TL54 Tnnt1-203ENSMUST00000108587 1059 ntAPPRIS ALT2 TSL 1 (best) BASIC15.5■□□□□ 0.07
Trim43aQ3TL54 Gm7862-201ENSMUST00000121461 292 ntBASIC15.5■□□□□ 0.07
Trim43aQ3TL54 Gm11452-201ENSMUST00000122376 690 ntBASIC15.5■□□□□ 0.07
Trim43aQ3TL54 Gm20496-202ENSMUST00000173770 523 ntTSL 5 BASIC15.5■□□□□ 0.07
Trim43aQ3TL54 Gm5253-201ENSMUST00000187104 1025 ntBASIC15.5■□□□□ 0.07
Trim43aQ3TL54 Gm28411-202ENSMUST00000191318 464 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
Trim43aQ3TL54 Gm9682-201ENSMUST00000197505 556 ntBASIC15.5■□□□□ 0.07
Trim43aQ3TL54 Krtcap3-208ENSMUST00000201937 889 ntAPPRIS P1 TSL 5 BASIC15.5■□□□□ 0.07
Trim43aQ3TL54 Gm6443-201ENSMUST00000203599 874 ntBASIC15.5■□□□□ 0.07
Trim43aQ3TL54 AC161829.1-201ENSMUST00000220298 281 ntBASIC15.5■□□□□ 0.07
Trim43aQ3TL54 Bpifa3-201ENSMUST00000028984 1107 ntAPPRIS P3 TSL 1 (best) BASIC15.5■□□□□ 0.07
Trim43aQ3TL54 Hist1h3c-201ENSMUST00000091752 630 ntAPPRIS P1 BASIC15.5■□□□□ 0.07
Trim43aQ3TL54 Zfp566-201ENSMUST00000088785 1709 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Trim43aQ3TL54 Myl12a-206ENSMUST00000148960 1937 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Trim43aQ3TL54 B4galnt1-201ENSMUST00000006914 2395 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Trim43aQ3TL54 Pou2f3-202ENSMUST00000176636 2522 ntAPPRIS P2 TSL 1 (best) BASIC15.5■□□□□ 0.07
Trim43aQ3TL54 Nat6-201ENSMUST00000093785 2053 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Trim43aQ3TL54 Fgfr2-207ENSMUST00000117872 4223 ntAPPRIS ALT2 TSL 1 (best) BASIC15.5■□□□□ 0.07
Trim43aQ3TL54 Ssr1-204ENSMUST00000225319 1610 ntBASIC15.5■□□□□ 0.07
Trim43aQ3TL54 Arpc1b-201ENSMUST00000085679 3105 ntAPPRIS P2 TSL 1 (best) BASIC15.5■□□□□ 0.07
Retrieved 100 of 76,532 protein–RNA pairs in 40.4 ms