Protein–RNA interactions for Protein: Q06831

Sox4, Transcription factor SOX-4, mousemouse

Predictions only

Length 440 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox4Q06831 4930544D05Rik-203ENSMUST00000144960 624 ntAPPRIS P2 TSL 5 BASIC14.39□□□□□ -0.11
Sox4Q06831 Tex30-213ENSMUST00000156392 1122 ntAPPRIS P1 TSL 5 BASIC14.39□□□□□ -0.11
Sox4Q06831 Faap20-210ENSMUST00000178473 1076 ntAPPRIS P3 TSL 1 (best) BASIC14.39□□□□□ -0.11
Sox4Q06831 Olfr286-202ENSMUST00000205305 969 ntBASIC14.39□□□□□ -0.11
Sox4Q06831 5830408C22Rik-201ENSMUST00000210072 1115 ntTSL 5 BASIC14.39□□□□□ -0.11
Sox4Q06831 1700128F08Rik-202ENSMUST00000213708 717 ntBASIC14.39□□□□□ -0.11
Sox4Q06831 Krtap9-3-201ENSMUST00000062683 759 ntAPPRIS P1 BASIC14.39□□□□□ -0.11
Sox4Q06831 Cdcp2-202ENSMUST00000221740 1623 ntAPPRIS ALT2 TSL 5 BASIC14.39□□□□□ -0.11
Sox4Q06831 Rxra-202ENSMUST00000100251 1952 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Sox4Q06831 Arhgef40-220ENSMUST00000182909 5108 ntAPPRIS P4 TSL 5 BASIC14.39□□□□□ -0.11
Sox4Q06831 Gm11190-201ENSMUST00000132487 3414 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Sox4Q06831 Acp6-201ENSMUST00000090759 1754 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Sox4Q06831 Fam172a-203ENSMUST00000163257 1436 ntAPPRIS P4 TSL 5 BASIC14.39□□□□□ -0.11
Sox4Q06831 Nxpe3-201ENSMUST00000099705 6430 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Sox4Q06831 Repin1-207ENSMUST00000163452 2959 ntAPPRIS P3 TSL 1 (best) BASIC14.39□□□□□ -0.11
Sox4Q06831 Iqcm-201ENSMUST00000034033 2014 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Sox4Q06831 Rgs6-216ENSMUST00000200911 2626 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Sox4Q06831 Gpx3-201ENSMUST00000082430 1594 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Sox4Q06831 Alx4-201ENSMUST00000042078 5253 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Sox4Q06831 Lman2l-204ENSMUST00000125304 3378 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Sox4Q06831 Catip-204ENSMUST00000191010 1866 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Sox4Q06831 Zfp90-201ENSMUST00000034382 2632 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Sox4Q06831 Gm13111-201ENSMUST00000136217 3542 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Sox4Q06831 Ubxn11-201ENSMUST00000070246 2014 ntAPPRIS ALT2 TSL 5 BASIC14.38□□□□□ -0.11
Sox4Q06831 Tmsb10-203ENSMUST00000114050 570 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Sox4Q06831 Hpca-207ENSMUST00000139450 812 ntAPPRIS P1 TSL 3 BASIC14.38□□□□□ -0.11
Sox4Q06831 Gm15706-201ENSMUST00000139612 899 ntTSL 2 BASIC14.38□□□□□ -0.11
Sox4Q06831 Tmem217-202ENSMUST00000168339 812 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Sox4Q06831 Hsf4-207ENSMUST00000174837 1251 ntTSL 5 BASIC14.38□□□□□ -0.11
Sox4Q06831 Ighv8-7-201ENSMUST00000194349 297 ntBASIC14.38□□□□□ -0.11
Sox4Q06831 Cyb561d2-205ENSMUST00000195235 1162 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Sox4Q06831 Rps10-201ENSMUST00000025052 519 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Sox4Q06831 Snrnp25-201ENSMUST00000039601 821 ntAPPRIS P2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Sox4Q06831 Psmd12-201ENSMUST00000021063 1904 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Sox4Q06831 Vps26a-202ENSMUST00000105447 2597 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Sox4Q06831 Ebf4-202ENSMUST00000110287 2580 ntAPPRIS ALT2 TSL 5 BASIC14.38□□□□□ -0.11
Sox4Q06831 Carlr-201ENSMUST00000181515 2574 ntBASIC14.38□□□□□ -0.11
Sox4Q06831 Prkab2-201ENSMUST00000045743 5006 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Sox4Q06831 Galnt2-201ENSMUST00000034458 4113 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Sox4Q06831 Irs3-201ENSMUST00000057314 2337 ntAPPRIS P2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Sox4Q06831 Akt2-ps-201ENSMUST00000120718 1449 ntBASIC14.38□□□□□ -0.11
Sox4Q06831 Gm45605-201ENSMUST00000210265 4269 ntBASIC14.38□□□□□ -0.11
Sox4Q06831 Socs7-201ENSMUST00000045540 7015 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Sox4Q06831 Asic4-201ENSMUST00000037708 2464 ntAPPRIS P2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Sox4Q06831 AI606473-201ENSMUST00000177201 1731 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Sox4Q06831 Cxcr3-201ENSMUST00000056614 1731 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Sox4Q06831 Lsm12-202ENSMUST00000107156 2015 ntTSL 5 BASIC14.37□□□□□ -0.11
Sox4Q06831 Fbxo25-201ENSMUST00000043520 2012 ntAPPRIS P3 TSL 1 (best) BASIC14.37□□□□□ -0.11
Sox4Q06831 Dtd2-201ENSMUST00000021339 2564 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Sox4Q06831 Sgk1-202ENSMUST00000092673 2576 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Sox4Q06831 Zc3h13-203ENSMUST00000227049 6144 ntAPPRIS ALT2 BASIC14.37□□□□□ -0.11
Sox4Q06831 Acox1-201ENSMUST00000066587 3987 ntAPPRIS P3 TSL 1 (best) BASIC14.37□□□□□ -0.11
Sox4Q06831 Pld5-202ENSMUST00000111166 1370 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Sox4Q06831 Slc30a5-201ENSMUST00000067246 3179 ntAPPRIS P2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Sox4Q06831 Zkscan3-203ENSMUST00000116434 2600 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Sox4Q06831 Tcf3-208ENSMUST00000105344 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Sox4Q06831 Fech-201ENSMUST00000025484 2901 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Sox4Q06831 Rfx5-207ENSMUST00000137088 4333 ntAPPRIS P1 TSL 5 BASIC14.37□□□□□ -0.11
Sox4Q06831 Ttyh1-203ENSMUST00000119661 2512 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Sox4Q06831 Aldh16a1-201ENSMUST00000107815 2685 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Sox4Q06831 Usp4-201ENSMUST00000035237 3662 ntAPPRIS P3 TSL 1 (best) BASIC14.37□□□□□ -0.11
Sox4Q06831 Tnfrsf13b-202ENSMUST00000101103 750 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Sox4Q06831 Gm22065-201ENSMUST00000103753 110 ntBASIC14.37□□□□□ -0.11
Sox4Q06831 Gm22066-201ENSMUST00000103761 110 ntBASIC14.37□□□□□ -0.11
Sox4Q06831 Gm24932-201ENSMUST00000103763 110 ntBASIC14.37□□□□□ -0.11
Sox4Q06831 Gm24115-201ENSMUST00000103799 110 ntBASIC14.37□□□□□ -0.11
Sox4Q06831 Gm22190-201ENSMUST00000103827 110 ntBASIC14.37□□□□□ -0.11
Sox4Q06831 Gm22191-201ENSMUST00000103831 110 ntBASIC14.37□□□□□ -0.11
Sox4Q06831 Gm25287-201ENSMUST00000103846 110 ntBASIC14.37□□□□□ -0.11
Sox4Q06831 Gm24721-201ENSMUST00000103849 110 ntBASIC14.37□□□□□ -0.11
Sox4Q06831 Gm22918-201ENSMUST00000103855 110 ntBASIC14.37□□□□□ -0.11
Sox4Q06831 Gm28018-201ENSMUST00000103869 110 ntBASIC14.37□□□□□ -0.11
Sox4Q06831 Gm26399-201ENSMUST00000103937 110 ntBASIC14.37□□□□□ -0.11
Sox4Q06831 AC155937.1-202ENSMUST00000156229 621 ntAPPRIS P1 TSL 2 BASIC14.37□□□□□ -0.11
Sox4Q06831 Cdk2ap2-204ENSMUST00000174514 669 ntTSL 2 BASIC14.37□□□□□ -0.11
Sox4Q06831 Gm25349-201ENSMUST00000177728 110 ntBASIC14.37□□□□□ -0.11
Sox4Q06831 Gm23616-201ENSMUST00000177797 110 ntBASIC14.37□□□□□ -0.11
Sox4Q06831 Gm25871-201ENSMUST00000177816 110 ntBASIC14.37□□□□□ -0.11
Sox4Q06831 Gm24752-201ENSMUST00000178240 110 ntBASIC14.37□□□□□ -0.11
Sox4Q06831 Gm24496-201ENSMUST00000178287 110 ntBASIC14.37□□□□□ -0.11
Sox4Q06831 Gm25649-201ENSMUST00000178476 110 ntBASIC14.37□□□□□ -0.11
Sox4Q06831 Gm25548-201ENSMUST00000178681 110 ntBASIC14.37□□□□□ -0.11
Sox4Q06831 Gm23147-201ENSMUST00000178841 110 ntBASIC14.37□□□□□ -0.11
Sox4Q06831 Gm26095-201ENSMUST00000179270 110 ntBASIC14.37□□□□□ -0.11
Sox4Q06831 Gm22171-201ENSMUST00000179283 110 ntBASIC14.37□□□□□ -0.11
Sox4Q06831 Gm23936-201ENSMUST00000179354 110 ntBASIC14.37□□□□□ -0.11
Sox4Q06831 Gm22619-201ENSMUST00000179516 110 ntBASIC14.37□□□□□ -0.11
Sox4Q06831 Gm25255-201ENSMUST00000179579 110 ntBASIC14.37□□□□□ -0.11
Sox4Q06831 Gm24755-201ENSMUST00000179691 110 ntBASIC14.37□□□□□ -0.11
Sox4Q06831 Gm26506-201ENSMUST00000179692 110 ntBASIC14.37□□□□□ -0.11
Sox4Q06831 Gm25086-201ENSMUST00000179931 110 ntBASIC14.37□□□□□ -0.11
Sox4Q06831 Gm23243-201ENSMUST00000180047 110 ntBASIC14.37□□□□□ -0.11
Sox4Q06831 Gm24659-201ENSMUST00000180212 110 ntBASIC14.37□□□□□ -0.11
Sox4Q06831 Gm24169-201ENSMUST00000180244 110 ntBASIC14.37□□□□□ -0.11
Sox4Q06831 Gm23689-201ENSMUST00000180354 110 ntBASIC14.37□□□□□ -0.11
Sox4Q06831 Tpi-rs2-201ENSMUST00000182471 756 ntBASIC14.37□□□□□ -0.11
Sox4Q06831 Gm27359-201ENSMUST00000184153 110 ntBASIC14.37□□□□□ -0.11
Sox4Q06831 Gm27785-201ENSMUST00000184268 110 ntBASIC14.37□□□□□ -0.11
Sox4Q06831 Gm27466-201ENSMUST00000184396 110 ntBASIC14.37□□□□□ -0.11
Sox4Q06831 Gm27703-201ENSMUST00000184836 110 ntBASIC14.37□□□□□ -0.11
Retrieved 100 of 76,532 protein–RNA pairs in 39.1 ms