Protein–RNA interactions for Protein: P97770

Thumpd3, THUMP domain-containing protein 3, mousemouse

Predictions only

Length 505 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Thumpd3P97770 Entpd5-204ENSMUST00000117286 1691 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Thumpd3P97770 Efnb1-201ENSMUST00000052839 3258 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Thumpd3P97770 Adrb3-203ENSMUST00000121838 1864 ntAPPRIS P2 TSL 1 (best) BASIC14.93□□□□□ -0.02
Thumpd3P97770 Fhdc1-205ENSMUST00000194027 1648 ntTSL 5 BASIC14.92□□□□□ -0.02
Thumpd3P97770 Zfp503-201ENSMUST00000043409 4216 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Thumpd3P97770 Il11ra1-201ENSMUST00000098132 2009 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Thumpd3P97770 Tsc2-217ENSMUST00000227745 5598 ntAPPRIS ALT2 BASIC14.92□□□□□ -0.02
Thumpd3P97770 Pelp1-201ENSMUST00000019065 3435 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Thumpd3P97770 Gm16838-201ENSMUST00000144594 816 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
Thumpd3P97770 Sirpa-213ENSMUST00000163034 677 ntTSL 3 BASIC14.92□□□□□ -0.02
Thumpd3P97770 Ccnd3-208ENSMUST00000182539 931 ntTSL 2 BASIC14.92□□□□□ -0.02
Thumpd3P97770 Gm38575-201ENSMUST00000213881 652 ntTSL 2 BASIC14.92□□□□□ -0.02
Thumpd3P97770 P2rx6-203ENSMUST00000171002 1353 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
Thumpd3P97770 Atat1-202ENSMUST00000061052 1452 ntAPPRIS ALT2 TSL 1 (best) BASIC14.92□□□□□ -0.02
Thumpd3P97770 Grin2a-202ENSMUST00000115835 5023 ntAPPRIS P1 TSL 5 BASIC14.92□□□□□ -0.02
Thumpd3P97770 Cfl1-202ENSMUST00000209469 2354 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Thumpd3P97770 Ccnf-201ENSMUST00000115390 3099 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Thumpd3P97770 Kcng1-202ENSMUST00000109191 4089 ntAPPRIS P1 TSL 5 BASIC14.92□□□□□ -0.02
Thumpd3P97770 Nphp4-202ENSMUST00000081393 5027 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Thumpd3P97770 Tmem30a-202ENSMUST00000120690 3627 ntAPPRIS ALT2 TSL 5 BASIC14.92□□□□□ -0.02
Thumpd3P97770 Ascc3-201ENSMUST00000035606 7760 ntAPPRIS P1 TSL 5 BASIC14.92□□□□□ -0.02
Thumpd3P97770 Xpot-201ENSMUST00000039810 5992 ntTSL 5 BASIC14.92□□□□□ -0.02
Thumpd3P97770 Eif4g3-215ENSMUST00000203828 5289 ntTSL 5 BASIC14.92□□□□□ -0.02
Thumpd3P97770 Robo4-205ENSMUST00000214185 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC14.92□□□□□ -0.02
Thumpd3P97770 Spatc1-201ENSMUST00000074173 1605 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Thumpd3P97770 Lmx1b-201ENSMUST00000041730 4790 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Thumpd3P97770 1700029H14Rik-203ENSMUST00000134023 1319 ntAPPRIS ALT2 TSL 1 (best) BASIC14.92□□□□□ -0.02
Thumpd3P97770 Lgi3-201ENSMUST00000047331 3174 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Thumpd3P97770 Clec2h-201ENSMUST00000032518 2160 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Thumpd3P97770 B4galt3-202ENSMUST00000111313 2098 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Thumpd3P97770 Ppp2r1b-211ENSMUST00000176798 2074 ntAPPRIS ALT2 TSL 5 BASIC14.91□□□□□ -0.02
Thumpd3P97770 4930402H24Rik-202ENSMUST00000110243 1984 ntAPPRIS ALT2 TSL 1 (best) BASIC14.91□□□□□ -0.02
Thumpd3P97770 Knop1-204ENSMUST00000106550 5524 ntAPPRIS P3 TSL 1 (best) BASIC14.91□□□□□ -0.02
Thumpd3P97770 Esyt1-201ENSMUST00000026427 3981 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Thumpd3P97770 Ylpm1-201ENSMUST00000021670 7003 ntAPPRIS P2 TSL 5 BASIC14.91□□□□□ -0.02
Thumpd3P97770 Gipc2-201ENSMUST00000046614 1596 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Thumpd3P97770 Nap1l1-206ENSMUST00000219143 1365 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
Thumpd3P97770 Gstt2-201ENSMUST00000038257 1370 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Thumpd3P97770 Slc46a3-202ENSMUST00000118527 2210 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Thumpd3P97770 Il11ra2-201ENSMUST00000108006 1299 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Thumpd3P97770 Rpl39l-202ENSMUST00000121292 550 ntAPPRIS P1 TSL 2 BASIC14.91□□□□□ -0.02
Thumpd3P97770 Ctcflos-201ENSMUST00000142165 469 ntTSL 3 BASIC14.91□□□□□ -0.02
Thumpd3P97770 Psmb1-201ENSMUST00000014913 1036 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Thumpd3P97770 Gm26664-201ENSMUST00000181140 705 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
Thumpd3P97770 D530033B14Rik-201ENSMUST00000205412 546 ntTSL 5 BASIC14.91□□□□□ -0.02
Thumpd3P97770 Nek4-204ENSMUST00000226833 1252 ntAPPRIS ALT2 BASIC14.91□□□□□ -0.02
Thumpd3P97770 Hist1h2bg-201ENSMUST00000079251 618 ntAPPRIS P1 BASIC14.91□□□□□ -0.02
Thumpd3P97770 Hist1h2bn-201ENSMUST00000091709 381 ntAPPRIS P1 BASIC14.91□□□□□ -0.02
Thumpd3P97770 Pik3ip1-202ENSMUST00000093399 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC14.91□□□□□ -0.02
Thumpd3P97770 Slc13a3-201ENSMUST00000029208 3524 ntAPPRIS P2 TSL 1 (best) BASIC14.91□□□□□ -0.02
Thumpd3P97770 Gid4-201ENSMUST00000070681 4283 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Thumpd3P97770 Rad18-202ENSMUST00000077088 2577 ntAPPRIS P3 TSL 1 (best) BASIC14.91□□□□□ -0.02
Thumpd3P97770 Chtf18-201ENSMUST00000048054 3214 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Thumpd3P97770 Akap17b-201ENSMUST00000051906 6003 ntAPPRIS P1 TSL 5 BASIC14.91□□□□□ -0.02
Thumpd3P97770 Ak1-203ENSMUST00000113278 2085 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Thumpd3P97770 Chst8-204ENSMUST00000205259 1980 ntAPPRIS P1 TSL 5 BASIC14.91□□□□□ -0.02
Thumpd3P97770 Plod2-201ENSMUST00000070522 3649 ntAPPRIS P3 TSL 1 (best) BASIC14.91□□□□□ -0.02
Thumpd3P97770 Pcgf5-211ENSMUST00000225920 6443 ntBASIC14.91□□□□□ -0.02
Thumpd3P97770 Aen-201ENSMUST00000107421 2007 ntAPPRIS ALT2 TSL 1 (best) BASIC14.9□□□□□ -0.02
Thumpd3P97770 Scn4b-201ENSMUST00000060125 4982 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Thumpd3P97770 Mib2-201ENSMUST00000103176 3642 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Thumpd3P97770 Pcdha11-201ENSMUST00000115658 5359 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Thumpd3P97770 Rbbp9-201ENSMUST00000028915 2170 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Thumpd3P97770 Dctn1-201ENSMUST00000077407 4118 ntAPPRIS ALT2 TSL 1 (best) BASIC14.9□□□□□ -0.02
Thumpd3P97770 Rap2b-201ENSMUST00000049064 6793 ntAPPRIS P1 BASIC14.9□□□□□ -0.02
Thumpd3P97770 Egfl7-216ENSMUST00000174211 1163 ntAPPRIS P4 TSL 1 (best) BASIC14.9□□□□□ -0.02
Thumpd3P97770 Hsd3b2-203ENSMUST00000177651 1122 ntAPPRIS P1 TSL 5 BASIC14.9□□□□□ -0.02
Thumpd3P97770 Gm27646-201ENSMUST00000183989 110 ntBASIC14.9□□□□□ -0.02
Thumpd3P97770 AC159106.1-201ENSMUST00000224421 690 ntBASIC14.9□□□□□ -0.02
Thumpd3P97770 Zfp706-204ENSMUST00000226671 447 ntAPPRIS P1 BASIC14.9□□□□□ -0.02
Thumpd3P97770 Anapc15-202ENSMUST00000035395 836 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
Thumpd3P97770 Ifi27-204ENSMUST00000079294 963 ntAPPRIS ALT2 TSL 1 (best) BASIC14.9□□□□□ -0.02
Thumpd3P97770 Ntng1-205ENSMUST00000106575 1620 ntAPPRIS ALT1 TSL 5 BASIC14.9□□□□□ -0.02
Thumpd3P97770 Ntng1-202ENSMUST00000072596 1620 ntAPPRIS P2 TSL 1 (best) BASIC14.9□□□□□ -0.02
Thumpd3P97770 2410018L13Rik-205ENSMUST00000149246 3370 ntTSL 2 BASIC14.9□□□□□ -0.02
Thumpd3P97770 Smim1-201ENSMUST00000125533 2568 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Thumpd3P97770 Ggn-204ENSMUST00000208330 2205 ntAPPRIS ALT2 TSL 5 BASIC14.9□□□□□ -0.02
Thumpd3P97770 Cbs-201ENSMUST00000067801 2497 ntAPPRIS P4 TSL 1 (best) BASIC14.9□□□□□ -0.02
Thumpd3P97770 Ush1g-201ENSMUST00000103037 3306 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Thumpd3P97770 Sh2b1-205ENSMUST00000205733 2956 ntAPPRIS ALT2 TSL 1 (best) BASIC14.9□□□□□ -0.02
Thumpd3P97770 Fzd7-201ENSMUST00000114246 4532 ntAPPRIS P1 BASIC14.9□□□□□ -0.02
Thumpd3P97770 Sync-201ENSMUST00000102599 2042 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Thumpd3P97770 Dmkn-203ENSMUST00000085688 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC14.9□□□□□ -0.02
Thumpd3P97770 Gm7901-201ENSMUST00000120430 1597 ntBASIC14.9□□□□□ -0.02
Thumpd3P97770 Pdlim5-212ENSMUST00000200043 1581 ntAPPRIS ALT2 TSL 1 (best) BASIC14.9□□□□□ -0.02
Thumpd3P97770 Ccdc103-201ENSMUST00000021307 1841 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Thumpd3P97770 Cyb5r1-201ENSMUST00000027726 1837 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Thumpd3P97770 Arhgef40-201ENSMUST00000093813 5621 ntAPPRIS P4 TSL 1 (best) BASIC14.89□□□□□ -0.03
Thumpd3P97770 Orai2-201ENSMUST00000041048 3908 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Thumpd3P97770 Iffo1-201ENSMUST00000117675 2833 ntAPPRIS P4 TSL 1 (best) BASIC14.89□□□□□ -0.03
Thumpd3P97770 AC157650.3-201ENSMUST00000225058 1476 ntBASIC14.89□□□□□ -0.03
Thumpd3P97770 Tsc2-221ENSMUST00000228412 5432 ntAPPRIS ALT2 BASIC14.89□□□□□ -0.03
Thumpd3P97770 Gng2-204ENSMUST00000160013 3826 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Thumpd3P97770 Rxra-202ENSMUST00000100251 1952 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
Thumpd3P97770 N6amt1-202ENSMUST00000118115 1951 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
Thumpd3P97770 Arhgap20-201ENSMUST00000065496 7161 ntAPPRIS P2 TSL 5 BASIC14.89□□□□□ -0.03
Thumpd3P97770 Gm29683-203ENSMUST00000209071 2488 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
Thumpd3P97770 Sesn1-201ENSMUST00000041438 2600 ntAPPRIS P3 TSL 1 (best) BASIC14.89□□□□□ -0.03
Thumpd3P97770 Uhrf1bp1l-201ENSMUST00000020112 6448 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Thumpd3P97770 Pank4-201ENSMUST00000030931 2508 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Retrieved 100 of 76,532 protein–RNA pairs in 48.4 ms