Protein–RNA interactions for Protein: P70390

Shox2, Short stature homeobox protein 2, mousemouse

Predictions only

Length 331 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shox2P70390 Glud1-201ENSMUST00000022322 3390 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Shox2P70390 Id2-202ENSMUST00000221761 1969 ntAPPRIS P1 TSL 5 BASIC14.46□□□□□ -0.09
Shox2P70390 Noto-201ENSMUST00000089578 1602 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Shox2P70390 Hist1h2bc-201ENSMUST00000018246 1156 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Shox2P70390 Mrpl36-202ENSMUST00000221730 717 ntAPPRIS P1 TSL 3 BASIC14.46□□□□□ -0.09
Shox2P70390 Rps23-201ENSMUST00000051955 937 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Shox2P70390 BC049762-201ENSMUST00000054226 760 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Shox2P70390 Sfxn5-202ENSMUST00000059034 1081 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.09
Shox2P70390 Hoxa10-201ENSMUST00000121043 1436 ntAPPRIS P1 TSL 2 BASIC14.46□□□□□ -0.09
Shox2P70390 Gm15889-202ENSMUST00000212669 2443 ntBASIC14.46□□□□□ -0.09
Shox2P70390 Olfr71-202ENSMUST00000107862 2587 ntAPPRIS P1 TSL 3 BASIC14.46□□□□□ -0.09
Shox2P70390 Ate1-201ENSMUST00000033139 4735 ntAPPRIS P4 TSL 1 (best) BASIC14.46□□□□□ -0.09
Shox2P70390 Men1-202ENSMUST00000078137 2738 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
Shox2P70390 Psph-201ENSMUST00000031399 1733 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
Shox2P70390 Gnpda2-201ENSMUST00000031117 1894 ntAPPRIS P3 TSL 1 (best) BASIC14.46□□□□□ -0.1
Shox2P70390 Wdr47-201ENSMUST00000051145 4222 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
Shox2P70390 1700065D16Rik-205ENSMUST00000190890 2903 ntBASIC14.45□□□□□ -0.1
Shox2P70390 Malt1-202ENSMUST00000224056 4028 ntAPPRIS ALT2 BASIC14.45□□□□□ -0.1
Shox2P70390 5830432E09Rik-203ENSMUST00000210953 2428 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Shox2P70390 9330162012Rik-201ENSMUST00000154919 3836 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Shox2P70390 Rcn3-201ENSMUST00000019683 1462 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Shox2P70390 Rcn3-208ENSMUST00000211352 1453 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Shox2P70390 Cmpk1-201ENSMUST00000030491 3170 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Shox2P70390 Sirt3-210ENSMUST00000211179 1606 ntAPPRIS ALT2 TSL 5 BASIC14.45□□□□□ -0.1
Shox2P70390 Hic2-201ENSMUST00000090190 6354 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Shox2P70390 Rbm39-202ENSMUST00000109584 667 ntTSL 5 BASIC14.45□□□□□ -0.1
Shox2P70390 Tmem208-201ENSMUST00000015000 785 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Shox2P70390 Kars-203ENSMUST00000164470 2189 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
Shox2P70390 Ptp4a3-204ENSMUST00000167582 2640 ntTSL 5 BASIC14.45□□□□□ -0.1
Shox2P70390 Gm42884-202ENSMUST00000202523 423 ntTSL 3 BASIC14.45□□□□□ -0.1
Shox2P70390 Fgf9-201ENSMUST00000022545 1593 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Shox2P70390 Fam213b-201ENSMUST00000030935 883 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Shox2P70390 Olfr279-201ENSMUST00000050451 933 ntAPPRIS P1 BASIC14.45□□□□□ -0.1
Shox2P70390 Cebpzos-201ENSMUST00000063817 753 ntAPPRIS P1 TSL 2 BASIC14.45□□□□□ -0.1
Shox2P70390 Zar1-201ENSMUST00000073528 1429 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Shox2P70390 4933416C03Rik-201ENSMUST00000099261 2254 ntAPPRIS P1 BASIC14.45□□□□□ -0.1
Shox2P70390 Dnase2a-202ENSMUST00000109744 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
Shox2P70390 Ppcdc-209ENSMUST00000214624 1814 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Shox2P70390 Tubg1-201ENSMUST00000043680 1802 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Shox2P70390 Krt14-201ENSMUST00000007272 1698 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Shox2P70390 Runx2-202ENSMUST00000113571 5898 ntAPPRIS P3 TSL 5 BASIC14.45□□□□□ -0.1
Shox2P70390 Grid2ip-202ENSMUST00000110733 3825 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Shox2P70390 Prrxl1-202ENSMUST00000186452 2371 ntAPPRIS P1 TSL 5 BASIC14.45□□□□□ -0.1
Shox2P70390 Zfp865-201ENSMUST00000076251 7503 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Shox2P70390 Slc7a15-201ENSMUST00000036938 1907 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Shox2P70390 Taf7l-201ENSMUST00000009740 1933 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Shox2P70390 Atp13a3-202ENSMUST00000100013 7310 ntAPPRIS P4 TSL 5 BASIC14.45□□□□□ -0.1
Shox2P70390 Pnpla2-203ENSMUST00000164016 2625 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
Shox2P70390 AC238940.1-201ENSMUST00000225106 1858 ntBASIC14.44□□□□□ -0.1
Shox2P70390 Mta2-201ENSMUST00000096240 3135 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Shox2P70390 Arid5a-201ENSMUST00000097778 2270 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
Shox2P70390 Tfdp2-201ENSMUST00000034982 7354 ntAPPRIS P3 TSL 1 (best) BASIC14.44□□□□□ -0.1
Shox2P70390 B930092H01Rik-201ENSMUST00000213377 2678 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Shox2P70390 Tjp2-201ENSMUST00000099558 4591 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Shox2P70390 Ggh-201ENSMUST00000098242 1965 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Shox2P70390 A230077H06Rik-201ENSMUST00000188579 2918 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Shox2P70390 Chrm4-201ENSMUST00000045537 1440 ntAPPRIS P1 BASIC14.44□□□□□ -0.1
Shox2P70390 Rhoc-202ENSMUST00000106787 959 ntAPPRIS P1 TSL 2 BASIC14.44□□□□□ -0.1
Shox2P70390 AA467197-202ENSMUST00000110512 751 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Shox2P70390 1700108N11Rik-201ENSMUST00000153051 917 ntTSL 2 BASIC14.44□□□□□ -0.1
Shox2P70390 Rab7-206ENSMUST00000203674 424 ntTSL 5 BASIC14.44□□□□□ -0.1
Shox2P70390 Fkbp3-201ENSMUST00000021332 1022 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Shox2P70390 Morn1-201ENSMUST00000030915 1659 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Shox2P70390 Mrgprf-201ENSMUST00000033386 2087 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Shox2P70390 5031415H12Rik-201ENSMUST00000181546 2481 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Shox2P70390 Jade1-204ENSMUST00000170711 2896 ntTSL 5 BASIC14.44□□□□□ -0.1
Shox2P70390 R3hdm4-202ENSMUST00000171416 1543 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Shox2P70390 Twf2-204ENSMUST00000188650 1508 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Shox2P70390 Cdk5r1-201ENSMUST00000053413 4162 ntAPPRIS P1 BASIC14.44□□□□□ -0.1
Shox2P70390 Tmem81-202ENSMUST00000188789 1751 ntAPPRIS P1 BASIC14.44□□□□□ -0.1
Shox2P70390 Kbtbd7-201ENSMUST00000061222 4526 ntAPPRIS P1 BASIC14.44□□□□□ -0.1
Shox2P70390 Lmx1b-201ENSMUST00000041730 4790 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Shox2P70390 Papd7-201ENSMUST00000044081 3994 ntAPPRIS P2 TSL 1 (best) BASIC14.44□□□□□ -0.1
Shox2P70390 Ap4e1-203ENSMUST00000110394 2271 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Shox2P70390 Lingo1-202ENSMUST00000114247 2287 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Shox2P70390 Txndc11-202ENSMUST00000118362 4248 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Shox2P70390 Stx18-201ENSMUST00000031008 1471 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Shox2P70390 Stap2-201ENSMUST00000043785 1491 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Shox2P70390 Prkab2-201ENSMUST00000045743 5006 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Shox2P70390 5730559C18Rik-201ENSMUST00000120339 2988 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Shox2P70390 Ank-201ENSMUST00000022875 3498 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Shox2P70390 Sh3glb1-201ENSMUST00000163279 3961 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Shox2P70390 Tmed3-201ENSMUST00000058488 1346 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Shox2P70390 2310007B03Rik-202ENSMUST00000143419 2074 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Shox2P70390 Mrpl58-209ENSMUST00000153983 2596 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Shox2P70390 9930014A18Rik-201ENSMUST00000180730 3074 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Shox2P70390 Prdm5-202ENSMUST00000031976 2155 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Shox2P70390 Evpl-201ENSMUST00000037007 6384 ntAPPRIS P1 TSL 2 BASIC14.43□□□□□ -0.1
Shox2P70390 Dok7-203ENSMUST00000114270 2779 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Shox2P70390 Gm13848-201ENSMUST00000130777 2047 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Shox2P70390 4933427J07Rik-201ENSMUST00000156275 1533 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Shox2P70390 Aatk-202ENSMUST00000103019 5177 ntAPPRIS P3 TSL 1 (best) BASIC14.43□□□□□ -0.1
Shox2P70390 Thap3-202ENSMUST00000105665 832 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
Shox2P70390 Fam3a-203ENSMUST00000114139 931 ntTSL 5 BASIC14.43□□□□□ -0.1
Shox2P70390 Gm8749-201ENSMUST00000117737 331 ntBASIC14.43□□□□□ -0.1
Shox2P70390 Gm14042-201ENSMUST00000120139 833 ntBASIC14.43□□□□□ -0.1
Shox2P70390 Gm7889-201ENSMUST00000185591 958 ntBASIC14.43□□□□□ -0.1
Shox2P70390 Gm43661-201ENSMUST00000199099 687 ntTSL 3 BASIC14.43□□□□□ -0.1
Shox2P70390 Gm32050-201ENSMUST00000209793 638 ntTSL 3 BASIC14.43□□□□□ -0.1
Shox2P70390 Chmp2a-203ENSMUST00000210587 930 ntAPPRIS P1 TSL 3 BASIC14.43□□□□□ -0.1
Retrieved 100 of 76,532 protein–RNA pairs in 18.7 ms