Protein–RNA interactions for Protein: P62311

Lsm3, U6 snRNA-associated Sm-like protein LSm3, mousemouse

Known RBP Predictions only

Length 102 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lsm3P62311 March11-203ENSMUST00000152841 1365 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
Lsm3P62311 Cpt2-201ENSMUST00000030345 2372 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Lsm3P62311 Nfat5-201ENSMUST00000075922 4619 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
Lsm3P62311 Rpn2-202ENSMUST00000116380 2756 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Lsm3P62311 Adck5-214ENSMUST00000162503 2040 ntAPPRIS P1 TSL 5 BASIC13.36□□□□□ -0.27
Lsm3P62311 Lrch4-202ENSMUST00000175968 2036 ntAPPRIS ALT2 TSL 5 BASIC13.36□□□□□ -0.27
Lsm3P62311 Hk3-208ENSMUST00000153665 2945 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Lsm3P62311 2310009B15Rik-201ENSMUST00000112025 565 ntAPPRIS P1 TSL 2 BASIC13.36□□□□□ -0.27
Lsm3P62311 Atf7ip2-204ENSMUST00000119023 1048 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Lsm3P62311 Nsl1-203ENSMUST00000139340 837 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Lsm3P62311 Ndufab1-ps-201ENSMUST00000166096 468 ntBASIC13.36□□□□□ -0.27
Lsm3P62311 Hist1h2br-203ENSMUST00000180288 1256 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Lsm3P62311 Gm27177-205ENSMUST00000184792 706 ntTSL 5 BASIC13.36□□□□□ -0.27
Lsm3P62311 Gm43791-201ENSMUST00000202914 468 ntTSL 5 BASIC13.36□□□□□ -0.27
Lsm3P62311 Ttc32-203ENSMUST00000219488 768 ntTSL 3 BASIC13.36□□□□□ -0.27
Lsm3P62311 4933427E11Rik-201ENSMUST00000056711 1214 ntBASIC13.36□□□□□ -0.27
Lsm3P62311 Hist1h2bq-202ENSMUST00000091749 1254 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Lsm3P62311 Popdc2-201ENSMUST00000023494 2169 ntAPPRIS P4 TSL 1 (best) BASIC13.36□□□□□ -0.27
Lsm3P62311 AI480526-202ENSMUST00000159637 1697 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Lsm3P62311 Gm38094-201ENSMUST00000195864 2978 ntBASIC13.36□□□□□ -0.27
Lsm3P62311 Nrxn1-201ENSMUST00000054059 4697 ntTSL 5 BASIC13.36□□□□□ -0.27
Lsm3P62311 Rad23a-202ENSMUST00000109761 1842 ntAPPRIS ALT1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Lsm3P62311 Naa40-201ENSMUST00000025675 3275 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Lsm3P62311 D930019O06Rik-201ENSMUST00000181841 3663 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Lsm3P62311 Kcnq2-208ENSMUST00000103051 4200 ntAPPRIS ALT2 TSL 5 BASIC13.36□□□□□ -0.27
Lsm3P62311 A230077H06Rik-201ENSMUST00000188579 2918 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Lsm3P62311 Mmp2-201ENSMUST00000034187 3078 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Lsm3P62311 Egr2-203ENSMUST00000127820 2665 ntAPPRIS ALT2 TSL 5 BASIC13.36□□□□□ -0.27
Lsm3P62311 Taf1c-201ENSMUST00000093099 3236 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Lsm3P62311 Hps3-202ENSMUST00000108321 3385 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Lsm3P62311 Mlkl-201ENSMUST00000056157 2003 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
Lsm3P62311 Gtse1-201ENSMUST00000170629 2721 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Lsm3P62311 Ngef-201ENSMUST00000027477 2746 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
Lsm3P62311 AC122901.1-201ENSMUST00000214203 1790 ntBASIC13.35□□□□□ -0.27
Lsm3P62311 Mrpl3-201ENSMUST00000035177 3972 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Lsm3P62311 Axdnd1-204ENSMUST00000178036 3586 ntAPPRIS ALT2 TSL 5 BASIC13.35□□□□□ -0.27
Lsm3P62311 Canx-205ENSMUST00000179865 4281 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Lsm3P62311 Sgce-202ENSMUST00000090686 1547 ntTSL 5 BASIC13.35□□□□□ -0.27
Lsm3P62311 Senp5-201ENSMUST00000023457 3498 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Lsm3P62311 Dpysl5-203ENSMUST00000114729 5191 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Lsm3P62311 Irs1-201ENSMUST00000069799 9144 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Lsm3P62311 Ddi2-202ENSMUST00000177592 3539 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Lsm3P62311 Gusb-202ENSMUST00000111307 932 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Lsm3P62311 Kctd10-201ENSMUST00000001125 1026 ntAPPRIS ALT1 TSL 5 BASIC13.35□□□□□ -0.27
Lsm3P62311 Gm25406-201ENSMUST00000157599 105 ntBASIC13.35□□□□□ -0.27
Lsm3P62311 Mir5122-201ENSMUST00000175004 89 ntBASIC13.35□□□□□ -0.27
Lsm3P62311 Rabac1-203ENSMUST00000205871 986 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Lsm3P62311 Cecr2-202ENSMUST00000112686 9212 ntAPPRIS P2 TSL 5 BASIC13.35□□□□□ -0.27
Lsm3P62311 Zc3h7b-201ENSMUST00000109554 5958 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Lsm3P62311 Zfp618-203ENSMUST00000107415 8826 ntAPPRIS ALT2 TSL 5 BASIC13.35□□□□□ -0.27
Lsm3P62311 Rbl1-201ENSMUST00000029170 4862 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Lsm3P62311 Mettl14-201ENSMUST00000029759 2741 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Lsm3P62311 Sept8-207ENSMUST00000147912 1742 ntAPPRIS ALT2 TSL 5 BASIC13.35□□□□□ -0.27
Lsm3P62311 Ncbp1-201ENSMUST00000030014 3010 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Lsm3P62311 Efemp1-201ENSMUST00000020759 2037 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Lsm3P62311 Tmem8b-202ENSMUST00000107865 4775 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Lsm3P62311 Edc4-201ENSMUST00000040254 4780 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
Lsm3P62311 Gm38346-201ENSMUST00000192379 2639 ntBASIC13.35□□□□□ -0.27
Lsm3P62311 Desi1-206ENSMUST00000152227 2934 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Lsm3P62311 Gm26781-201ENSMUST00000181385 1477 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Lsm3P62311 Spred2-202ENSMUST00000093299 4449 ntTSL 5 BASIC13.35□□□□□ -0.27
Lsm3P62311 Zfp236-201ENSMUST00000171071 9626 ntAPPRIS P2 TSL 1 (best) BASIC13.35□□□□□ -0.27
Lsm3P62311 Zbtb4-202ENSMUST00000108639 7811 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Lsm3P62311 Sema3d-201ENSMUST00000030868 6307 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Lsm3P62311 Zscan29-205ENSMUST00000163766 3611 ntAPPRIS ALT2 TSL 5 BASIC13.34□□□□□ -0.27
Lsm3P62311 Tfap2a-202ENSMUST00000110193 2863 ntAPPRIS P3 TSL 1 (best) BASIC13.34□□□□□ -0.27
Lsm3P62311 Osm-201ENSMUST00000075221 2272 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Lsm3P62311 Ovol2-202ENSMUST00000103171 1547 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
Lsm3P62311 Obsl1-201ENSMUST00000113565 3379 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Lsm3P62311 Dusp6-201ENSMUST00000020118 2796 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Lsm3P62311 Cnot7-201ENSMUST00000034012 2615 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Lsm3P62311 Mllt6-201ENSMUST00000044730 7274 ntAPPRIS P2 TSL 1 (best) BASIC13.34□□□□□ -0.27
Lsm3P62311 Catip-204ENSMUST00000191010 1866 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
Lsm3P62311 A530083I20Rik-203ENSMUST00000214426 1855 ntTSL 5 BASIC13.34□□□□□ -0.27
Lsm3P62311 Ikzf4-201ENSMUST00000133342 5150 ntAPPRIS P1 TSL 2 BASIC13.34□□□□□ -0.27
Lsm3P62311 Ankrd13c-201ENSMUST00000040787 3903 ntAPPRIS P1 TSL 5 BASIC13.34□□□□□ -0.27
Lsm3P62311 Slc38a10-204ENSMUST00000103018 4578 ntAPPRIS P3 TSL 1 (best) BASIC13.34□□□□□ -0.27
Lsm3P62311 1810010H24Rik-201ENSMUST00000106767 1100 ntAPPRIS P2 TSL 2 BASIC13.34□□□□□ -0.27
Lsm3P62311 Ern1-203ENSMUST00000106800 654 ntTSL 3 BASIC13.34□□□□□ -0.27
Lsm3P62311 Ccl27a-202ENSMUST00000108032 350 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Lsm3P62311 B430219N15Rik-201ENSMUST00000147230 835 ntTSL 2 BASIC13.34□□□□□ -0.27
Lsm3P62311 Ube2t-201ENSMUST00000027687 1116 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Lsm3P62311 Nme2-202ENSMUST00000072566 734 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Lsm3P62311 Plekhb1-201ENSMUST00000079176 2079 ntAPPRIS P3 TSL 1 (best) BASIC13.34□□□□□ -0.27
Lsm3P62311 Frmpd4-204ENSMUST00000112149 8456 ntAPPRIS ALT2 TSL 5 BASIC13.34□□□□□ -0.27
Lsm3P62311 Slc34a1-201ENSMUST00000057167 2433 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Lsm3P62311 Zfp672-204ENSMUST00000108829 3094 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Lsm3P62311 Dnase1l1-201ENSMUST00000019232 1625 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Lsm3P62311 Fam53b-201ENSMUST00000065371 5052 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Lsm3P62311 Nfatc4-201ENSMUST00000024179 3267 ntAPPRIS P3 TSL 1 (best) BASIC13.34□□□□□ -0.27
Lsm3P62311 Zfp385b-203ENSMUST00000111830 2642 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Lsm3P62311 Prkx-202ENSMUST00000114044 2639 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Lsm3P62311 Bptf-202ENSMUST00000106762 11847 ntAPPRIS ALT2 TSL 5 BASIC13.34□□□□□ -0.27
Lsm3P62311 4930556M19Rik-201ENSMUST00000180604 2468 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Lsm3P62311 Armcx1-203ENSMUST00000113197 2179 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Lsm3P62311 Lsm12-202ENSMUST00000107156 2015 ntTSL 5 BASIC13.34□□□□□ -0.27
Lsm3P62311 Gzf1-201ENSMUST00000028928 4232 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Lsm3P62311 Gnb1l-211ENSMUST00000167778 3569 ntAPPRIS P3 TSL 1 (best) BASIC13.33□□□□□ -0.27
Lsm3P62311 Sigirr-206ENSMUST00000210167 1897 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.27
Lsm3P62311 Tubb3-201ENSMUST00000071134 1868 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.27
Retrieved 100 of 76,532 protein–RNA pairs in 24.9 ms