Protein–RNA interactions for Protein: P61620

Sec61a1, Protein transport protein Sec61 subunit alpha isoform 1, mousemouse

Known RBP Predictions only

Length 476 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sec61a1P61620 Ntng2-210ENSMUST00000177689 1679 ntAPPRIS ALT2 TSL 5 BASIC12.92□□□□□ -0.34
Sec61a1P61620 Ftsj1-202ENSMUST00000115594 1529 ntTSL 5 BASIC12.92□□□□□ -0.34
Sec61a1P61620 Tmem116-203ENSMUST00000094357 1366 ntAPPRIS ALT2 TSL 5 BASIC12.92□□□□□ -0.34
Sec61a1P61620 Slc13a3-201ENSMUST00000029208 3524 ntAPPRIS P2 TSL 1 (best) BASIC12.92□□□□□ -0.34
Sec61a1P61620 Crmp1-202ENSMUST00000114158 3051 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Sec61a1P61620 Gm37240-203ENSMUST00000154148 2913 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Sec61a1P61620 Ffar2-202ENSMUST00000163504 1913 ntAPPRIS P1 TSL 2 BASIC12.92□□□□□ -0.34
Sec61a1P61620 Gm9856-201ENSMUST00000217077 2578 ntBASIC12.91□□□□□ -0.34
Sec61a1P61620 Dek-201ENSMUST00000021807 2556 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Sec61a1P61620 Snx14-204ENSMUST00000165315 3109 ntAPPRIS P2 TSL 1 (best) BASIC12.91□□□□□ -0.34
Sec61a1P61620 Ldb3-208ENSMUST00000228044 1883 ntAPPRIS ALT2 BASIC12.91□□□□□ -0.34
Sec61a1P61620 Capn1-201ENSMUST00000025891 3100 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Sec61a1P61620 Kif5c-201ENSMUST00000028102 6856 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Sec61a1P61620 AC131104.1-201ENSMUST00000222118 1739 ntTSL 5 BASIC12.91□□□□□ -0.34
Sec61a1P61620 Lap3-201ENSMUST00000046122 2267 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Sec61a1P61620 Sh2b2-201ENSMUST00000005188 2848 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Sec61a1P61620 Ascc3-201ENSMUST00000035606 7760 ntAPPRIS P1 TSL 5 BASIC12.91□□□□□ -0.34
Sec61a1P61620 Gm13337-201ENSMUST00000119183 1594 ntBASIC12.91□□□□□ -0.34
Sec61a1P61620 Pcdhga8-201ENSMUST00000066149 4730 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Sec61a1P61620 Ubtf-209ENSMUST00000173870 2936 ntAPPRIS P3 TSL 5 BASIC12.91□□□□□ -0.34
Sec61a1P61620 Tmem254c-202ENSMUST00000100819 1211 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Sec61a1P61620 Gm21586-201ENSMUST00000107988 264 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Sec61a1P61620 Gm21953-201ENSMUST00000108002 264 ntAPPRIS P1 TSL 5 BASIC12.91□□□□□ -0.34
Sec61a1P61620 Gm13036-201ENSMUST00000117799 748 ntBASIC12.91□□□□□ -0.34
Sec61a1P61620 Gm16183-201ENSMUST00000127527 1193 ntTSL 5 BASIC12.91□□□□□ -0.34
Sec61a1P61620 Gm26695-201ENSMUST00000180920 1251 ntTSL 5 BASIC12.91□□□□□ -0.34
Sec61a1P61620 Gm20878-208ENSMUST00000181518 264 ntAPPRIS P2 TSL 1 (best) BASIC12.91□□□□□ -0.34
Sec61a1P61620 Calcb-203ENSMUST00000182816 706 ntAPPRIS ALT2 TSL 5 BASIC12.91□□□□□ -0.34
Sec61a1P61620 Gm30437-201ENSMUST00000206086 1201 ntBASIC12.91□□□□□ -0.34
Sec61a1P61620 4931406C07Rik-209ENSMUST00000217042 691 ntTSL 3 BASIC12.91□□□□□ -0.34
Sec61a1P61620 Cela3a-201ENSMUST00000024200 958 ntAPPRIS P1 TSL 5 BASIC12.91□□□□□ -0.34
Sec61a1P61620 Olfr30-201ENSMUST00000055204 1066 ntAPPRIS P1 BASIC12.91□□□□□ -0.34
Sec61a1P61620 Klk14-201ENSMUST00000056329 1271 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Sec61a1P61620 Spdef-202ENSMUST00000114870 2070 ntAPPRIS P1 TSL 5 BASIC12.91□□□□□ -0.34
Sec61a1P61620 Safb2-201ENSMUST00000075510 3277 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Sec61a1P61620 Knop1-204ENSMUST00000106550 5524 ntAPPRIS P3 TSL 1 (best) BASIC12.91□□□□□ -0.34
Sec61a1P61620 4933434E20Rik-203ENSMUST00000068798 1500 ntTSL 5 BASIC12.91□□□□□ -0.34
Sec61a1P61620 Nr2f1-205ENSMUST00000150498 2588 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Sec61a1P61620 Gpr137b-202ENSMUST00000220628 3634 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Sec61a1P61620 Hmgn1-201ENSMUST00000050884 2174 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Sec61a1P61620 Fars2-208ENSMUST00000224611 1750 ntAPPRIS P1 BASIC12.91□□□□□ -0.34
Sec61a1P61620 Fbxo21-201ENSMUST00000035579 3883 ntAPPRIS ALT2 TSL 1 (best) BASIC12.91□□□□□ -0.34
Sec61a1P61620 Spns1-202ENSMUST00000119754 2001 ntTSL 5 BASIC12.91□□□□□ -0.34
Sec61a1P61620 AU040320-201ENSMUST00000047431 4384 ntAPPRIS ALT2 TSL 1 (best) BASIC12.91□□□□□ -0.34
Sec61a1P61620 Hnrnpa2b1-204ENSMUST00000203220 1638 ntAPPRIS P2 TSL 1 (best) BASIC12.91□□□□□ -0.34
Sec61a1P61620 Nphp1-201ENSMUST00000028857 2260 ntAPPRIS P3 TSL 1 (best) BASIC12.91□□□□□ -0.34
Sec61a1P61620 Zfp57-211ENSMUST00000174524 1747 ntAPPRIS P3 TSL 1 (best) BASIC12.91□□□□□ -0.34
Sec61a1P61620 Gm5922-201ENSMUST00000214963 1723 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Sec61a1P61620 Ripor2-201ENSMUST00000038477 3371 ntAPPRIS ALT2 TSL 1 (best) BASIC12.9□□□□□ -0.34
Sec61a1P61620 Ap1s2-202ENSMUST00000069041 2226 ntAPPRIS P4 TSL 1 (best) BASIC12.9□□□□□ -0.34
Sec61a1P61620 Adal-201ENSMUST00000028702 2471 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Sec61a1P61620 Proser2-202ENSMUST00000114942 4398 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Sec61a1P61620 Kcnma1-214ENSMUST00000190044 3747 ntAPPRIS ALT2 TSL 1 (best) BASIC12.9□□□□□ -0.34
Sec61a1P61620 Gm38392-202ENSMUST00000165196 1303 ntAPPRIS P5 TSL 5 BASIC12.9□□□□□ -0.34
Sec61a1P61620 Gnb2-212ENSMUST00000150063 1569 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Sec61a1P61620 Gstz1-205ENSMUST00000222885 1571 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Sec61a1P61620 Csnk1g2-202ENSMUST00000085435 1825 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Sec61a1P61620 Armc9-205ENSMUST00000131412 2160 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Sec61a1P61620 Kbtbd7-201ENSMUST00000061222 4526 ntAPPRIS P1 BASIC12.9□□□□□ -0.34
Sec61a1P61620 A230072C01Rik-202ENSMUST00000136447 1412 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Sec61a1P61620 Nomo1-201ENSMUST00000033121 4257 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Sec61a1P61620 Adgrb2-202ENSMUST00000097868 4635 ntAPPRIS ALT2 TSL 5 BASIC12.9□□□□□ -0.34
Sec61a1P61620 Elf4-202ENSMUST00000114958 6088 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Sec61a1P61620 Lmna-203ENSMUST00000120377 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC12.9□□□□□ -0.34
Sec61a1P61620 Chml-201ENSMUST00000104984 6905 ntAPPRIS P1 TSL 5 BASIC12.9□□□□□ -0.34
Sec61a1P61620 Chml-202ENSMUST00000209720 6905 ntTSL 5 BASIC12.9□□□□□ -0.34
Sec61a1P61620 Pcdha12-201ENSMUST00000047614 5335 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Sec61a1P61620 Lypd1-205ENSMUST00000162899 1511 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Sec61a1P61620 Lrp11-203ENSMUST00000130590 3220 ntAPPRIS ALT2 TSL 1 (best) BASIC12.9□□□□□ -0.34
Sec61a1P61620 Cplx2-201ENSMUST00000026985 4928 ntAPPRIS P1 TSL 2 BASIC12.9□□□□□ -0.34
Sec61a1P61620 Il11ra2-201ENSMUST00000108006 1299 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Sec61a1P61620 Fxyd5-208ENSMUST00000161805 1166 ntAPPRIS P3 TSL 1 (best) BASIC12.9□□□□□ -0.34
Sec61a1P61620 Gm5682-201ENSMUST00000173402 505 ntBASIC12.9□□□□□ -0.34
Sec61a1P61620 Gm27002-201ENSMUST00000182789 620 ntTSL 2 BASIC12.9□□□□□ -0.34
Sec61a1P61620 Gm27217-201ENSMUST00000183438 882 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Sec61a1P61620 Gm27628-201ENSMUST00000184911 107 ntBASIC12.9□□□□□ -0.34
Sec61a1P61620 Gm38575-201ENSMUST00000213881 652 ntTSL 2 BASIC12.9□□□□□ -0.34
Sec61a1P61620 Ndufb7-201ENSMUST00000036996 623 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Sec61a1P61620 Sf3b6-201ENSMUST00000046207 1180 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Sec61a1P61620 Palm3-201ENSMUST00000055077 2452 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Sec61a1P61620 Gm19863-201ENSMUST00000192480 2218 ntBASIC12.9□□□□□ -0.34
Sec61a1P61620 Vwa2-201ENSMUST00000026068 4049 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Sec61a1P61620 Cdk11b-203ENSMUST00000105600 3170 ntAPPRIS P3 TSL 5 BASIC12.9□□□□□ -0.34
Sec61a1P61620 Cul5-209ENSMUST00000166367 5942 ntTSL 5 BASIC12.9□□□□□ -0.34
Sec61a1P61620 Rnf123-214ENSMUST00000162355 4727 ntAPPRIS ALT2 TSL 1 (best) BASIC12.9□□□□□ -0.34
Sec61a1P61620 Abl2-201ENSMUST00000027888 3549 ntAPPRIS P3 TSL 1 (best) BASIC12.9□□□□□ -0.34
Sec61a1P61620 Endov-202ENSMUST00000106244 5070 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Sec61a1P61620 Crem-201ENSMUST00000025069 2931 ntTSL 5 BASIC12.9□□□□□ -0.34
Sec61a1P61620 Col9a2-201ENSMUST00000030372 2924 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Sec61a1P61620 Hdhd2-203ENSMUST00000097522 2318 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Sec61a1P61620 Scara5-202ENSMUST00000069226 3262 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Sec61a1P61620 Sh3bp5-201ENSMUST00000091903 2684 ntAPPRIS P3 TSL 1 (best) BASIC12.9□□□□□ -0.34
Sec61a1P61620 Rnf4-207ENSMUST00000182709 3046 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Sec61a1P61620 Sbf2-213ENSMUST00000171218 1476 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Sec61a1P61620 Alg3-201ENSMUST00000045918 1451 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Sec61a1P61620 Lzts1-201ENSMUST00000037049 1800 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Sec61a1P61620 Arf1-201ENSMUST00000061242 1800 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Sec61a1P61620 Fhad1-202ENSMUST00000105779 4263 ntAPPRIS P1 TSL 5 BASIC12.9□□□□□ -0.34
Sec61a1P61620 Tcf25-208ENSMUST00000212571 2649 ntAPPRIS ALT2 TSL 1 (best) BASIC12.9□□□□□ -0.35
Sec61a1P61620 Rims1-201ENSMUST00000081544 5954 ntAPPRIS ALT2 TSL 5 BASIC12.9□□□□□ -0.35
Retrieved 100 of 76,532 protein–RNA pairs in 46.3 ms