Protein–RNA interactions for Protein: P59326

Ythdf1, YTH domain-containing family protein 1, mousemouse

Known RBP Predictions only

Length 559 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ythdf1P59326 Atg16l1-202ENSMUST00000113186 3004 ntAPPRIS ALT1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Ythdf1P59326 Ghdc-201ENSMUST00000017891 2462 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
Ythdf1P59326 Pcsk6-202ENSMUST00000098391 4207 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.15
Ythdf1P59326 AC122301.2-201ENSMUST00000219020 1474 ntTSL 5 BASIC14.08□□□□□ -0.16
Ythdf1P59326 Scarf1-201ENSMUST00000042808 2887 ntAPPRIS P2 TSL 1 (best) BASIC14.08□□□□□ -0.16
Ythdf1P59326 Ptch1-201ENSMUST00000021921 7725 ntAPPRIS P2 TSL 1 (best) BASIC14.08□□□□□ -0.16
Ythdf1P59326 Lcn12-202ENSMUST00000114245 619 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
Ythdf1P59326 Irak1-204ENSMUST00000114352 3825 ntAPPRIS P3 TSL 1 (best) BASIC14.08□□□□□ -0.16
Ythdf1P59326 Gm25925-201ENSMUST00000158314 306 ntBASIC14.08□□□□□ -0.16
Ythdf1P59326 Emp3-202ENSMUST00000164119 784 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Ythdf1P59326 4930505N22Rik-201ENSMUST00000181820 945 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Ythdf1P59326 AC122024.2-201ENSMUST00000220086 871 ntBASIC14.08□□□□□ -0.16
Ythdf1P59326 Espn-202ENSMUST00000049305 1142 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Ythdf1P59326 Parp10-202ENSMUST00000165738 3367 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Ythdf1P59326 Rbpjl-201ENSMUST00000017151 2456 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Ythdf1P59326 Dpysl4-202ENSMUST00000121184 2727 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Ythdf1P59326 Tmem215-202ENSMUST00000179526 2276 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Ythdf1P59326 Plcb3-201ENSMUST00000025912 4201 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Ythdf1P59326 Casz1-202ENSMUST00000122222 7926 ntAPPRIS P1 TSL 5 BASIC14.08□□□□□ -0.16
Ythdf1P59326 Mpl-201ENSMUST00000006556 2083 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
Ythdf1P59326 Cep97-202ENSMUST00000117468 2887 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Ythdf1P59326 Gm39244-202ENSMUST00000210837 1857 ntTSL 5 BASIC14.08□□□□□ -0.16
Ythdf1P59326 Ncam2-201ENSMUST00000037785 4893 ntAPPRIS P3 TSL 1 (best) BASIC14.08□□□□□ -0.16
Ythdf1P59326 Phgdh-201ENSMUST00000065793 1893 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Ythdf1P59326 Epb41l1-205ENSMUST00000109574 5904 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Ythdf1P59326 AU040320-202ENSMUST00000102607 4191 ntAPPRIS P4 TSL 1 (best) BASIC14.08□□□□□ -0.16
Ythdf1P59326 Pkp3-202ENSMUST00000106039 2919 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
Ythdf1P59326 Adgrg3-201ENSMUST00000051259 2439 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Ythdf1P59326 Leo1-201ENSMUST00000048937 2180 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Ythdf1P59326 Gm20149-201ENSMUST00000214691 1667 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Ythdf1P59326 AI661453-201ENSMUST00000037701 1410 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Ythdf1P59326 Ngef-201ENSMUST00000027477 2746 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Ythdf1P59326 Ap3d1-201ENSMUST00000020420 4805 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Ythdf1P59326 Ppt2-209ENSMUST00000171121 1710 ntAPPRIS P1 TSL 5 BASIC14.07□□□□□ -0.16
Ythdf1P59326 F2r-201ENSMUST00000059193 3336 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Ythdf1P59326 Hdgfl2-201ENSMUST00000002911 2264 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Ythdf1P59326 Ttc8-202ENSMUST00000085109 2272 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Ythdf1P59326 Col3a1-201ENSMUST00000087883 5564 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Ythdf1P59326 Zfp777-201ENSMUST00000095944 3184 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Ythdf1P59326 Gpr137-205ENSMUST00000166115 1845 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Ythdf1P59326 Fbxo28-201ENSMUST00000051431 4925 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Ythdf1P59326 Gfod2-203ENSMUST00000155038 951 ntTSL 2 BASIC14.07□□□□□ -0.16
Ythdf1P59326 Psmd13-209ENSMUST00000164681 726 ntTSL 5 BASIC14.07□□□□□ -0.16
Ythdf1P59326 Gm10499-201ENSMUST00000174094 934 ntBASIC14.07□□□□□ -0.16
Ythdf1P59326 AC164567.1-201ENSMUST00000219185 960 ntBASIC14.07□□□□□ -0.16
Ythdf1P59326 Imp3-201ENSMUST00000034827 924 ntAPPRIS P1 BASIC14.07□□□□□ -0.16
Ythdf1P59326 Rpl39l-201ENSMUST00000044103 805 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Ythdf1P59326 Mrpl54-201ENSMUST00000046114 604 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Ythdf1P59326 Nfatc4-201ENSMUST00000024179 3267 ntAPPRIS P3 TSL 1 (best) BASIC14.07□□□□□ -0.16
Ythdf1P59326 Shroom3-202ENSMUST00000113054 6401 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Ythdf1P59326 Cyp2t4-201ENSMUST00000108385 1599 ntAPPRIS ALT2 TSL 5 BASIC14.07□□□□□ -0.16
Ythdf1P59326 Tmco1-204ENSMUST00000195015 1573 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Ythdf1P59326 Tmem101-201ENSMUST00000021296 1574 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Ythdf1P59326 Snph-201ENSMUST00000028951 4730 ntAPPRIS P3 TSL 1 (best) BASIC14.07□□□□□ -0.16
Ythdf1P59326 4833439L19Rik-201ENSMUST00000026989 2727 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Ythdf1P59326 Plch2-207ENSMUST00000139976 5322 ntAPPRIS P3 TSL 1 (best) BASIC14.07□□□□□ -0.16
Ythdf1P59326 Asic3-201ENSMUST00000049346 1853 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Ythdf1P59326 Bhmt-201ENSMUST00000099309 2490 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Ythdf1P59326 Nagk-203ENSMUST00000113851 1323 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Ythdf1P59326 Rrp15-201ENSMUST00000001339 1321 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Ythdf1P59326 Rnf144a-201ENSMUST00000020971 5164 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Ythdf1P59326 Cplx2-201ENSMUST00000026985 4928 ntAPPRIS P1 TSL 2 BASIC14.07□□□□□ -0.16
Ythdf1P59326 Prkca-202ENSMUST00000100302 2265 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Ythdf1P59326 1810032O08Rik-201ENSMUST00000106378 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Ythdf1P59326 Pisd-202ENSMUST00000071829 1986 ntTSL 5 BASIC14.07□□□□□ -0.16
Ythdf1P59326 Ncor2-203ENSMUST00000111393 8661 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Ythdf1P59326 Mif4gd-203ENSMUST00000106507 1656 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Ythdf1P59326 Arpc1b-211ENSMUST00000196111 1394 ntAPPRIS ALT1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Ythdf1P59326 Hk3-208ENSMUST00000153665 2945 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Ythdf1P59326 Elf4-202ENSMUST00000114958 6088 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Ythdf1P59326 Kcnh2-201ENSMUST00000036092 4221 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Ythdf1P59326 Ankrd61-201ENSMUST00000079624 1720 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Ythdf1P59326 Nid2-201ENSMUST00000022340 4876 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Ythdf1P59326 Palm-201ENSMUST00000046945 2651 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Ythdf1P59326 Ralgapb-201ENSMUST00000046274 8366 ntAPPRIS ALT1 TSL 5 BASIC14.07□□□□□ -0.16
Ythdf1P59326 D930019O06Rik-201ENSMUST00000181841 3663 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Ythdf1P59326 Syngap1-201ENSMUST00000081285 4315 ntAPPRIS ALT2 TSL 5 BASIC14.06□□□□□ -0.16
Ythdf1P59326 Tpm1-215ENSMUST00000113705 1759 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Ythdf1P59326 Ahdc1-202ENSMUST00000105914 5898 ntAPPRIS P1 TSL 5 BASIC14.06□□□□□ -0.16
Ythdf1P59326 Psmd8-203ENSMUST00000186182 1512 ntAPPRIS P2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Ythdf1P59326 Me1-201ENSMUST00000034989 3288 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Ythdf1P59326 Tmprss11d-202ENSMUST00000122377 2256 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Ythdf1P59326 Raet1e-204ENSMUST00000181645 1579 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Ythdf1P59326 Zkscan7-202ENSMUST00000215872 4035 ntTSL 5 BASIC14.06□□□□□ -0.16
Ythdf1P59326 Hdac8-201ENSMUST00000087916 1936 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Ythdf1P59326 Mob1a-202ENSMUST00000055261 4412 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Ythdf1P59326 P2rx6-201ENSMUST00000023441 2345 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Ythdf1P59326 Dolpp1-202ENSMUST00000113612 1958 ntTSL 3 BASIC14.06□□□□□ -0.16
Ythdf1P59326 Gm996-201ENSMUST00000114217 4881 ntAPPRIS P1 TSL 2 BASIC14.06□□□□□ -0.16
Ythdf1P59326 Gm13168-201ENSMUST00000121771 632 ntBASIC14.06□□□□□ -0.16
Ythdf1P59326 AC134329.2-201ENSMUST00000217897 428 ntBASIC14.06□□□□□ -0.16
Ythdf1P59326 Cck-201ENSMUST00000035120 691 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Ythdf1P59326 Krtap1-5-201ENSMUST00000054532 1041 ntAPPRIS P1 BASIC14.06□□□□□ -0.16
Ythdf1P59326 Gid4-201ENSMUST00000070681 4283 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Ythdf1P59326 Rbmxl1-201ENSMUST00000049245 1695 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Ythdf1P59326 Srr-204ENSMUST00000121738 3183 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Ythdf1P59326 E430024P14Rik-203ENSMUST00000160545 2833 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Ythdf1P59326 Wbp1-202ENSMUST00000113936 1314 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Ythdf1P59326 Gm14029-201ENSMUST00000151051 1348 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Ythdf1P59326 A230087F16Rik-202ENSMUST00000181561 1303 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Retrieved 100 of 76,532 protein–RNA pairs in 20.9 ms