Protein–RNA interactions for Protein: P55288

Cdh11, Cadherin-11, mousemouse

Predictions only

Length 796 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdh11P55288 Gm9727-201ENSMUST00000161387 555 ntBASIC13.36□□□□□ -0.27
Cdh11P55288 Banf1-202ENSMUST00000170010 742 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Cdh11P55288 Washc3-202ENSMUST00000171151 837 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Cdh11P55288 AC084391.1-201ENSMUST00000200651 141 ntBASIC13.36□□□□□ -0.27
Cdh11P55288 Cort-201ENSMUST00000030815 677 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Cdh11P55288 Rpl30-202ENSMUST00000079735 886 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Cdh11P55288 Pth2r-201ENSMUST00000027083 2414 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Cdh11P55288 Cacna1g-203ENSMUST00000103166 8104 ntAPPRIS ALT2 TSL 5 BASIC13.36□□□□□ -0.27
Cdh11P55288 Enoph1-201ENSMUST00000031268 1420 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Cdh11P55288 Rgs6-208ENSMUST00000186458 5588 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
Cdh11P55288 Bmper-201ENSMUST00000071982 3791 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Cdh11P55288 Fbxo34-203ENSMUST00000163324 3132 ntAPPRIS ALT2 TSL 2 BASIC13.36□□□□□ -0.27
Cdh11P55288 Apol8-202ENSMUST00000089450 2498 ntAPPRIS ALT2 TSL 5 BASIC13.36□□□□□ -0.27
Cdh11P55288 Chml-201ENSMUST00000104984 6905 ntAPPRIS P1 TSL 5 BASIC13.36□□□□□ -0.27
Cdh11P55288 Chml-202ENSMUST00000209720 6905 ntTSL 5 BASIC13.36□□□□□ -0.27
Cdh11P55288 D6Ertd527e-204ENSMUST00000204927 2218 ntAPPRIS P3 TSL 1 (best) BASIC13.36□□□□□ -0.27
Cdh11P55288 Gjb1-201ENSMUST00000052130 1565 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Cdh11P55288 Slc22a15-207ENSMUST00000190824 3010 ntTSL 5 BASIC13.36□□□□□ -0.27
Cdh11P55288 Nhs-202ENSMUST00000087085 8805 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
Cdh11P55288 Pex12-202ENSMUST00000108146 2389 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Cdh11P55288 Gm12355-201ENSMUST00000104933 1311 ntAPPRIS P1 BASIC13.36□□□□□ -0.27
Cdh11P55288 Marveld3-201ENSMUST00000001722 1330 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Cdh11P55288 Pank4-201ENSMUST00000030931 2508 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Cdh11P55288 Islr2-210ENSMUST00000215950 4109 ntAPPRIS P3 TSL 1 (best) BASIC13.36□□□□□ -0.27
Cdh11P55288 Sh2b2-201ENSMUST00000005188 2848 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Cdh11P55288 Eif4g3-215ENSMUST00000203828 5289 ntTSL 5 BASIC13.35□□□□□ -0.27
Cdh11P55288 Spcs2-210ENSMUST00000209032 1610 ntTSL 5 BASIC13.35□□□□□ -0.27
Cdh11P55288 Carlr-201ENSMUST00000181515 2574 ntBASIC13.35□□□□□ -0.27
Cdh11P55288 Zfyve27-201ENSMUST00000099443 2573 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
Cdh11P55288 Lmx1b-201ENSMUST00000041730 4790 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Cdh11P55288 Fars2-208ENSMUST00000224611 1750 ntAPPRIS P1 BASIC13.35□□□□□ -0.27
Cdh11P55288 Cpne1-202ENSMUST00000109607 3441 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Cdh11P55288 Fam57b-203ENSMUST00000205324 1915 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Cdh11P55288 Rnf44-201ENSMUST00000037422 3734 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Cdh11P55288 Sirt5-206ENSMUST00000221481 1548 ntTSL 5 BASIC13.35□□□□□ -0.27
Cdh11P55288 Twsg1-201ENSMUST00000024906 4046 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Cdh11P55288 Ap1s2-202ENSMUST00000069041 2226 ntAPPRIS P4 TSL 1 (best) BASIC13.35□□□□□ -0.27
Cdh11P55288 Rxra-202ENSMUST00000100251 1952 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Cdh11P55288 Fzd7-201ENSMUST00000114246 4532 ntAPPRIS P1 BASIC13.35□□□□□ -0.27
Cdh11P55288 Kctd10-201ENSMUST00000001125 1026 ntAPPRIS ALT1 TSL 5 BASIC13.35□□□□□ -0.27
Cdh11P55288 2200002J24Rik-201ENSMUST00000013227 333 ntAPPRIS P1 TSL 3 BASIC13.35□□□□□ -0.27
Cdh11P55288 Psma6-204ENSMUST00000163070 787 ntTSL 5 BASIC13.35□□□□□ -0.27
Cdh11P55288 Gm5682-201ENSMUST00000173402 505 ntBASIC13.35□□□□□ -0.27
Cdh11P55288 Hsd3b2-203ENSMUST00000177651 1122 ntAPPRIS P1 TSL 5 BASIC13.35□□□□□ -0.27
Cdh11P55288 Faap20-210ENSMUST00000178473 1076 ntAPPRIS P3 TSL 1 (best) BASIC13.35□□□□□ -0.27
Cdh11P55288 Rab10os-206ENSMUST00000179908 746 ntTSL 5 BASIC13.35□□□□□ -0.27
Cdh11P55288 Ccnd3-208ENSMUST00000182539 931 ntTSL 2 BASIC13.35□□□□□ -0.27
Cdh11P55288 Smim4-204ENSMUST00000203261 1219 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Cdh11P55288 Gm19164-201ENSMUST00000210667 640 ntBASIC13.35□□□□□ -0.27
Cdh11P55288 Mrpl46-201ENSMUST00000032841 1134 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Cdh11P55288 A830031A19Rik-201ENSMUST00000068360 757 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Cdh11P55288 Atp2a2-202ENSMUST00000177974 3984 ntAPPRIS ALT1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Cdh11P55288 Scara5-202ENSMUST00000069226 3262 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Cdh11P55288 Selenon-201ENSMUST00000060435 3445 ntAPPRIS P1 TSL 5 BASIC13.35□□□□□ -0.27
Cdh11P55288 Slc20a2-201ENSMUST00000067786 3566 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Cdh11P55288 Tcf12-201ENSMUST00000034755 4621 ntAPPRIS ALT1 TSL 5 BASIC13.35□□□□□ -0.27
Cdh11P55288 Flt4-201ENSMUST00000020617 6255 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Cdh11P55288 2410018L13Rik-205ENSMUST00000149246 3370 ntTSL 2 BASIC13.35□□□□□ -0.27
Cdh11P55288 Tle1-204ENSMUST00000102848 3660 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Cdh11P55288 Nkapl-201ENSMUST00000068235 1463 ntAPPRIS P1 BASIC13.35□□□□□ -0.27
Cdh11P55288 Smpd4-221ENSMUST00000170996 1619 ntTSL 5 BASIC13.35□□□□□ -0.27
Cdh11P55288 Zfp358-203ENSMUST00000208423 2200 ntAPPRIS P1 BASIC13.35□□□□□ -0.27
Cdh11P55288 Gpr146-201ENSMUST00000051293 4157 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Cdh11P55288 Mapt-203ENSMUST00000106989 2250 ntAPPRIS ALT2 TSL 5 BASIC13.34□□□□□ -0.27
Cdh11P55288 Arpin-201ENSMUST00000048731 2277 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Cdh11P55288 C230004F18Rik-203ENSMUST00000137153 2138 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Cdh11P55288 Gm9932-201ENSMUST00000194154 2116 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Cdh11P55288 Necab3-201ENSMUST00000000895 1829 ntAPPRIS P2 TSL 1 (best) BASIC13.34□□□□□ -0.27
Cdh11P55288 Ada-201ENSMUST00000017841 1688 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Cdh11P55288 4933434E20Rik-203ENSMUST00000068798 1500 ntTSL 5 BASIC13.34□□□□□ -0.27
Cdh11P55288 Fhad1-202ENSMUST00000105779 4263 ntAPPRIS P1 TSL 5 BASIC13.34□□□□□ -0.27
Cdh11P55288 Rab9b-201ENSMUST00000058814 3980 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Cdh11P55288 Mtss1-201ENSMUST00000080371 4938 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Cdh11P55288 Dab1-203ENSMUST00000106830 5278 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Cdh11P55288 Mdfic-201ENSMUST00000101663 3431 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Cdh11P55288 Mdfic-206ENSMUST00000189359 3435 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Cdh11P55288 Mdfic-207ENSMUST00000190255 3431 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Cdh11P55288 Epha1-201ENSMUST00000073387 3273 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Cdh11P55288 Snx14-204ENSMUST00000165315 3109 ntAPPRIS P2 TSL 1 (best) BASIC13.34□□□□□ -0.27
Cdh11P55288 Marveld2-203ENSMUST00000168772 1888 ntAPPRIS P1 TSL 5 BASIC13.34□□□□□ -0.27
Cdh11P55288 Brpf1-210ENSMUST00000204626 4381 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
Cdh11P55288 Bcs1l-201ENSMUST00000027358 1890 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Cdh11P55288 Oas1a-201ENSMUST00000080322 1885 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Cdh11P55288 Ino80-202ENSMUST00000110808 3928 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Cdh11P55288 Tbx3-201ENSMUST00000018748 4856 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Cdh11P55288 Pja1-205ENSMUST00000167246 2666 ntAPPRIS P4 TSL 1 (best) BASIC13.34□□□□□ -0.27
Cdh11P55288 Aig1-202ENSMUST00000105534 617 ntTSL 5 BASIC13.34□□□□□ -0.27
Cdh11P55288 Tmem217-201ENSMUST00000114683 904 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Cdh11P55288 4930481B07Rik-201ENSMUST00000128160 1089 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Cdh11P55288 Sirpa-213ENSMUST00000163034 677 ntTSL 3 BASIC13.34□□□□□ -0.27
Cdh11P55288 Gm2308-201ENSMUST00000166539 1004 ntBASIC13.34□□□□□ -0.27
Cdh11P55288 Hsf4-203ENSMUST00000172525 1276 ntTSL 5 BASIC13.34□□□□□ -0.27
Cdh11P55288 Gm7286-201ENSMUST00000182691 1007 ntBASIC13.34□□□□□ -0.27
Cdh11P55288 Gm38708-201ENSMUST00000203855 677 ntTSL 5 BASIC13.34□□□□□ -0.27
Cdh11P55288 Scamp5-203ENSMUST00000214256 1025 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Cdh11P55288 Nek4-204ENSMUST00000226833 1252 ntAPPRIS ALT2 BASIC13.34□□□□□ -0.27
Cdh11P55288 Pfn3-201ENSMUST00000054146 545 ntAPPRIS P1 BASIC13.34□□□□□ -0.27
Cdh11P55288 Olfr30-201ENSMUST00000055204 1066 ntAPPRIS P1 BASIC13.34□□□□□ -0.27
Cdh11P55288 Hist1h2bg-201ENSMUST00000079251 618 ntAPPRIS P1 BASIC13.34□□□□□ -0.27
Cdh11P55288 Hist1h2bn-201ENSMUST00000091709 381 ntAPPRIS P1 BASIC13.34□□□□□ -0.27
Retrieved 100 of 76,532 protein–RNA pairs in 28.2 ms