Protein–RNA interactions for Protein: P53784

Sox3, Transcription factor SOX-3, mousemouse

Predictions only

Length 375 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox3P53784 Gm17251-201ENSMUST00000170103 925 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Sox3P53784 Cyba-201ENSMUST00000017604 744 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Sox3P53784 Gltpd2-202ENSMUST00000179000 794 ntAPPRIS ALT2 TSL 2 BASIC14.05□□□□□ -0.16
Sox3P53784 Gm27618-201ENSMUST00000183671 60 ntBASIC14.05□□□□□ -0.16
Sox3P53784 Lsamp-207ENSMUST00000189229 637 ntTSL 3 BASIC14.05□□□□□ -0.16
Sox3P53784 Lsamp-210ENSMUST00000191610 1297 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Sox3P53784 AC132467.2-202ENSMUST00000227726 559 ntBASIC14.05□□□□□ -0.16
Sox3P53784 Olfr520-201ENSMUST00000098264 951 ntAPPRIS P1 BASIC14.05□□□□□ -0.16
Sox3P53784 Grid2-201ENSMUST00000095852 5860 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Sox3P53784 Gemin5-202ENSMUST00000102711 4919 ntAPPRIS ALT2 TSL 5 BASIC14.05□□□□□ -0.16
Sox3P53784 Zfp865-201ENSMUST00000076251 7503 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Sox3P53784 Sirpa-203ENSMUST00000103202 3982 ntAPPRIS P3 TSL 1 (best) BASIC14.05□□□□□ -0.16
Sox3P53784 Gm6018-201ENSMUST00000216090 1306 ntBASIC14.05□□□□□ -0.16
Sox3P53784 Tmem143-203ENSMUST00000209350 2466 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Sox3P53784 Ptprm-202ENSMUST00000223982 4802 ntAPPRIS P2 BASIC14.05□□□□□ -0.16
Sox3P53784 Patz1-201ENSMUST00000057089 3118 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Sox3P53784 Gm16796-201ENSMUST00000126086 3172 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Sox3P53784 E430018J23Rik-201ENSMUST00000074249 2063 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Sox3P53784 Esco1-203ENSMUST00000115864 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Sox3P53784 Olfr317-202ENSMUST00000215513 2769 ntAPPRIS P1 TSL 5 BASIC14.05□□□□□ -0.16
Sox3P53784 Cacng2-201ENSMUST00000019290 5510 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Sox3P53784 Kpna4-201ENSMUST00000029353 8819 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Sox3P53784 C2cd2l-201ENSMUST00000065080 4337 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Sox3P53784 Ralgds-203ENSMUST00000113893 3683 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Sox3P53784 Zfp12-201ENSMUST00000032591 5265 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Sox3P53784 Ythdf3-203ENSMUST00000191774 3196 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Sox3P53784 Crhbp-202ENSMUST00000221025 1779 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Sox3P53784 Cspp1-205ENSMUST00000122156 2535 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Sox3P53784 Hoxd12-201ENSMUST00000001878 2534 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Sox3P53784 Plscr3-202ENSMUST00000108632 1835 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Sox3P53784 Lrrc24-202ENSMUST00000049956 1904 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Sox3P53784 Ss18l1-201ENSMUST00000041126 4343 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Sox3P53784 Cyp2a5-201ENSMUST00000005685 2013 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Sox3P53784 Lmntd2-202ENSMUST00000170841 2077 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Sox3P53784 Sema4c-201ENSMUST00000114991 3773 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Sox3P53784 Gm3054-201ENSMUST00000111075 265 ntTSL 5 BASIC14.04□□□□□ -0.16
Sox3P53784 Gfpt1-202ENSMUST00000113655 1255 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Sox3P53784 Rpl9-202ENSMUST00000118543 1193 ntTSL 2 BASIC14.04□□□□□ -0.16
Sox3P53784 Gm15758-201ENSMUST00000161681 695 ntTSL 5 BASIC14.04□□□□□ -0.16
Sox3P53784 Gm10142-201ENSMUST00000179767 363 ntAPPRIS P1 BASIC14.04□□□□□ -0.16
Sox3P53784 Pantr2-201ENSMUST00000180589 463 ntTSL 3 BASIC14.04□□□□□ -0.16
Sox3P53784 Mir7684-201ENSMUST00000183858 60 ntBASIC14.04□□□□□ -0.16
Sox3P53784 Gm27989-201ENSMUST00000184721 107 ntBASIC14.04□□□□□ -0.16
Sox3P53784 Trip6-203ENSMUST00000199121 366 ntTSL 3 BASIC14.04□□□□□ -0.16
Sox3P53784 Slc12a5-208ENSMUST00000202479 1202 ntTSL 5 BASIC14.04□□□□□ -0.16
Sox3P53784 Gm29909-201ENSMUST00000214500 922 ntTSL 5 BASIC14.04□□□□□ -0.16
Sox3P53784 Tlr2-201ENSMUST00000029623 3014 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Sox3P53784 Sh3bgr-201ENSMUST00000048770 1321 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Sox3P53784 Slc44a5-201ENSMUST00000089948 4098 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Sox3P53784 Mis12-206ENSMUST00000164220 1416 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Sox3P53784 Stk11-202ENSMUST00000105370 1474 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Sox3P53784 Add1-203ENSMUST00000114335 4547 ntTSL 5 BASIC14.04□□□□□ -0.16
Sox3P53784 Ablim3-201ENSMUST00000049378 4532 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Sox3P53784 Vwa5b2-203ENSMUST00000100074 2512 ntAPPRIS P3 TSL 1 (best) BASIC14.04□□□□□ -0.16
Sox3P53784 Adcy3-204ENSMUST00000127756 4672 ntAPPRIS P3 TSL 5 BASIC14.04□□□□□ -0.16
Sox3P53784 AI849053-201ENSMUST00000181021 2658 ntTSL 3 BASIC14.04□□□□□ -0.16
Sox3P53784 Foxl1-201ENSMUST00000181609 2705 ntAPPRIS P1 BASIC14.04□□□□□ -0.16
Sox3P53784 Atp13a3-201ENSMUST00000061350 7220 ntAPPRIS ALT2 TSL 5 BASIC14.04□□□□□ -0.16
Sox3P53784 Dnm1-217ENSMUST00000202578 2820 ntAPPRIS P2 TSL 5 BASIC14.04□□□□□ -0.16
Sox3P53784 Gm15222-202ENSMUST00000228667 1726 ntBASIC14.04□□□□□ -0.16
Sox3P53784 Bcan-201ENSMUST00000090971 3141 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Sox3P53784 2010007H06Rik-202ENSMUST00000186025 4934 ntTSL 2 BASIC14.03□□□□□ -0.16
Sox3P53784 Tacc1-202ENSMUST00000084512 6471 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Sox3P53784 Ddi2-201ENSMUST00000102484 9553 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Sox3P53784 Ap5m1-205ENSMUST00000227431 3757 ntBASIC14.03□□□□□ -0.16
Sox3P53784 Gm43697-201ENSMUST00000199637 2581 ntBASIC14.03□□□□□ -0.16
Sox3P53784 Zfand3-201ENSMUST00000057897 2617 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Sox3P53784 Ano10-201ENSMUST00000042546 2653 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Sox3P53784 Gm996-203ENSMUST00000188161 2925 ntAPPRIS P1 BASIC14.03□□□□□ -0.16
Sox3P53784 Ppp2r5e-205ENSMUST00000220035 3135 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Sox3P53784 Mcc-202ENSMUST00000164666 3606 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Sox3P53784 Ppdpf-202ENSMUST00000108841 689 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Sox3P53784 Ghr-203ENSMUST00000110698 1171 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Sox3P53784 Meg3-208ENSMUST00000143847 706 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Sox3P53784 Unkl-205ENSMUST00000161679 1053 ntTSL 5 BASIC14.03□□□□□ -0.16
Sox3P53784 Ppt2-202ENSMUST00000166040 1139 ntAPPRIS P1 TSL 3 BASIC14.03□□□□□ -0.16
Sox3P53784 Gm5819-201ENSMUST00000171469 465 ntAPPRIS P1 BASIC14.03□□□□□ -0.16
Sox3P53784 9130230N09Rik-201ENSMUST00000174568 663 ntTSL 3 BASIC14.03□□□□□ -0.16
Sox3P53784 AC130829.1-201ENSMUST00000221548 494 ntBASIC14.03□□□□□ -0.16
Sox3P53784 1700018B24Rik-201ENSMUST00000036023 593 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Sox3P53784 Polr2j-201ENSMUST00000041366 646 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Sox3P53784 Lce3e-201ENSMUST00000098886 607 ntAPPRIS P1 TSL 3 BASIC14.03□□□□□ -0.16
Sox3P53784 Stard7-201ENSMUST00000110374 1530 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Sox3P53784 Gjb3-202ENSMUST00000106091 1623 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Sox3P53784 Dnajc9-201ENSMUST00000022345 1631 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Sox3P53784 Hmgb3-204ENSMUST00000114582 1743 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Sox3P53784 Hmgb3-203ENSMUST00000088874 1728 ntAPPRIS P1 TSL 2 BASIC14.03□□□□□ -0.16
Sox3P53784 Mindy1-212ENSMUST00000168223 1812 ntTSL 5 BASIC14.03□□□□□ -0.16
Sox3P53784 A430034D21Rik-201ENSMUST00000194339 1802 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Sox3P53784 Adgrl1-210ENSMUST00000152978 5734 ntTSL 5 BASIC14.03□□□□□ -0.16
Sox3P53784 CN725425-202ENSMUST00000190436 2041 ntAPPRIS P5 TSL 5 BASIC14.03□□□□□ -0.16
Sox3P53784 Rlf-201ENSMUST00000056635 6242 ntAPPRIS P2 TSL 5 BASIC14.03□□□□□ -0.16
Sox3P53784 Iqsec3-201ENSMUST00000046373 6840 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Sox3P53784 Kdm8-201ENSMUST00000033010 2389 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Sox3P53784 Large2-203ENSMUST00000111284 2449 ntAPPRIS ALT2 TSL 5 BASIC14.03□□□□□ -0.16
Sox3P53784 Asb2-201ENSMUST00000021617 2690 ntAPPRIS P2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Sox3P53784 Map7d1-203ENSMUST00000122129 3249 ntAPPRIS ALT2 TSL 5 BASIC14.03□□□□□ -0.16
Sox3P53784 Lrp11-201ENSMUST00000019931 3386 ntAPPRIS P2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Sox3P53784 Hnf4a-202ENSMUST00000109411 4362 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
Sox3P53784 Map2k7-202ENSMUST00000062686 3525 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
Retrieved 100 of 76,532 protein–RNA pairs in 26.2 ms