Protein–RNA interactions for Protein: P48381

Rfx3, Transcription factor RFX3, mousemouse

Predictions only

Length 749 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rfx3P48381 Wdr31-203ENSMUST00000120095 2549 ntAPPRIS P3 TSL 1 (best) BASIC13.23□□□□□ -0.29
Rfx3P48381 Prkcb-202ENSMUST00000064989 2911 ntAPPRIS P3 TSL 1 (best) BASIC13.23□□□□□ -0.29
Rfx3P48381 Tmem2-202ENSMUST00000096194 6667 ntAPPRIS P1 TSL 5 BASIC13.23□□□□□ -0.29
Rfx3P48381 Rabepk-203ENSMUST00000118108 1431 ntAPPRIS P1 TSL 5 BASIC13.23□□□□□ -0.29
Rfx3P48381 Mon1a-202ENSMUST00000191906 2821 ntTSL 2 BASIC13.23□□□□□ -0.29
Rfx3P48381 Bcs1l-201ENSMUST00000027358 1890 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Rfx3P48381 Fstl5-201ENSMUST00000038364 5107 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Rfx3P48381 Pls1-201ENSMUST00000093800 3704 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Rfx3P48381 Nap1l1-206ENSMUST00000219143 1365 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Rfx3P48381 Actg1-204ENSMUST00000106215 1827 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Rfx3P48381 Necab3-201ENSMUST00000000895 1829 ntAPPRIS P2 TSL 1 (best) BASIC13.23□□□□□ -0.29
Rfx3P48381 Capn7-201ENSMUST00000022451 3648 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Rfx3P48381 Zfp319-201ENSMUST00000057717 7232 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Rfx3P48381 Tnn-201ENSMUST00000039178 5817 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Rfx3P48381 Kdm2b-201ENSMUST00000031435 3532 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Rfx3P48381 Zdhhc7-201ENSMUST00000034280 3069 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Rfx3P48381 Gm43738-201ENSMUST00000200659 2635 ntAPPRIS P1 TSL 5 BASIC13.23□□□□□ -0.29
Rfx3P48381 Tpr-203ENSMUST00000124973 7430 ntAPPRIS P2 TSL 1 (best) BASIC13.23□□□□□ -0.29
Rfx3P48381 Fbxl19-207ENSMUST00000206893 3449 ntAPPRIS ALT2 TSL 5 BASIC13.23□□□□□ -0.29
Rfx3P48381 Arl4a-201ENSMUST00000101472 1200 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Rfx3P48381 Frs3os-201ENSMUST00000136531 978 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Rfx3P48381 Tmem255b-201ENSMUST00000167071 1138 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Rfx3P48381 4930477E14Rik-201ENSMUST00000181412 621 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Rfx3P48381 Gm42413-201ENSMUST00000196216 338 ntTSL 5 BASIC13.23□□□□□ -0.29
Rfx3P48381 AC133598.3-202ENSMUST00000224219 531 ntBASIC13.23□□□□□ -0.29
Rfx3P48381 Slc2a6-201ENSMUST00000045702 2138 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Rfx3P48381 Idnk-201ENSMUST00000051490 764 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Rfx3P48381 Mtus2-201ENSMUST00000071878 1211 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Rfx3P48381 Chmp1a-201ENSMUST00000000759 2140 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Rfx3P48381 Slc41a1-201ENSMUST00000086559 4697 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Rfx3P48381 Dlx4os-201ENSMUST00000156477 1664 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Rfx3P48381 Os9-201ENSMUST00000080975 2458 ntAPPRIS P3 TSL 1 (best) BASIC13.23□□□□□ -0.29
Rfx3P48381 Cacna1g-203ENSMUST00000103166 8104 ntAPPRIS ALT2 TSL 5 BASIC13.23□□□□□ -0.29
Rfx3P48381 Hnrnpa2b1-201ENSMUST00000069949 1647 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Rfx3P48381 Ybx1-201ENSMUST00000079644 1628 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Rfx3P48381 Ptk7-201ENSMUST00000044442 4255 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Rfx3P48381 Lysmd3-201ENSMUST00000049055 2338 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Rfx3P48381 Aspm-205ENSMUST00000200083 6072 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Rfx3P48381 Pdk2-201ENSMUST00000038431 2246 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Rfx3P48381 H2-T23-201ENSMUST00000102678 1472 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Rfx3P48381 Fhod3-201ENSMUST00000037097 5408 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Rfx3P48381 Mrap2-202ENSMUST00000113149 2112 ntAPPRIS P1 TSL 5 BASIC13.22□□□□□ -0.29
Rfx3P48381 Il1rn-204ENSMUST00000114487 2474 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Rfx3P48381 Mtss1-201ENSMUST00000080371 4938 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Rfx3P48381 Fgd6-201ENSMUST00000020208 8044 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Rfx3P48381 Olfr683-202ENSMUST00000209879 3841 ntAPPRIS P1 TSL 5 BASIC13.22□□□□□ -0.29
Rfx3P48381 Irgc1-201ENSMUST00000080594 1737 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Rfx3P48381 Best4-ps-201ENSMUST00000129783 1380 ntBASIC13.22□□□□□ -0.29
Rfx3P48381 Ociad2-204ENSMUST00000200830 2384 ntTSL 3 BASIC13.22□□□□□ -0.29
Rfx3P48381 Gm29361-201ENSMUST00000183323 2000 ntBASIC13.22□□□□□ -0.29
Rfx3P48381 Pcyox1l-201ENSMUST00000025472 2017 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Rfx3P48381 Cd82-202ENSMUST00000099696 1657 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Rfx3P48381 Pcdha12-201ENSMUST00000047614 5335 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Rfx3P48381 Rims1-201ENSMUST00000081544 5954 ntAPPRIS ALT2 TSL 5 BASIC13.22□□□□□ -0.29
Rfx3P48381 Elp6-205ENSMUST00000199592 1304 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Rfx3P48381 Sh2b1-205ENSMUST00000205733 2956 ntAPPRIS ALT2 TSL 1 (best) BASIC13.22□□□□□ -0.29
Rfx3P48381 N6amt1-202ENSMUST00000118115 1951 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Rfx3P48381 Dnm1-205ENSMUST00000113365 3257 ntAPPRIS ALT1 TSL 5 BASIC13.22□□□□□ -0.29
Rfx3P48381 Dstyk-204ENSMUST00000188389 3232 ntTSL 5 BASIC13.22□□□□□ -0.29
Rfx3P48381 Zfyve27-201ENSMUST00000099443 2573 ntAPPRIS ALT2 TSL 1 (best) BASIC13.22□□□□□ -0.29
Rfx3P48381 Spsb3-201ENSMUST00000024976 1947 ntAPPRIS P3 TSL 1 (best) BASIC13.22□□□□□ -0.29
Rfx3P48381 Gm6184-201ENSMUST00000120403 1261 ntBASIC13.22□□□□□ -0.29
Rfx3P48381 Tpm3-205ENSMUST00000121503 1139 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Rfx3P48381 Gm43767-201ENSMUST00000198933 381 ntBASIC13.22□□□□□ -0.29
Rfx3P48381 Tmem270-202ENSMUST00000201316 847 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Rfx3P48381 Lce3c-201ENSMUST00000055375 567 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Rfx3P48381 Cdpf1-201ENSMUST00000071876 997 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Rfx3P48381 Psma5-201ENSMUST00000090569 1239 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Rfx3P48381 Atp6v0c-202ENSMUST00000098862 796 ntAPPRIS P1 TSL 2 BASIC13.22□□□□□ -0.29
Rfx3P48381 Endov-202ENSMUST00000106244 5070 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Rfx3P48381 Rnf31-201ENSMUST00000019443 3485 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Rfx3P48381 Specc1-209ENSMUST00000201671 2523 ntTSL 5 BASIC13.22□□□□□ -0.29
Rfx3P48381 Iqce-202ENSMUST00000077890 2494 ntAPPRIS ALT2 TSL 1 (best) BASIC13.22□□□□□ -0.29
Rfx3P48381 2810402E24Rik-201ENSMUST00000190699 3040 ntBASIC13.22□□□□□ -0.29
Rfx3P48381 Gpr155-202ENSMUST00000076463 5061 ntAPPRIS P3 TSL 1 (best) BASIC13.22□□□□□ -0.29
Rfx3P48381 Dnajb1-201ENSMUST00000005620 2996 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Rfx3P48381 Gm43195-201ENSMUST00000200614 2332 ntBASIC13.22□□□□□ -0.29
Rfx3P48381 Twsg1-201ENSMUST00000024906 4046 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Rfx3P48381 Clip2-201ENSMUST00000036999 4893 ntAPPRIS ALT2 TSL 1 (best) BASIC13.22□□□□□ -0.29
Rfx3P48381 A230072C01Rik-202ENSMUST00000136447 1412 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Rfx3P48381 Pigv-201ENSMUST00000062118 3979 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Rfx3P48381 Rxra-202ENSMUST00000100251 1952 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Rfx3P48381 Igsf21-201ENSMUST00000039331 1979 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Rfx3P48381 Gm44645-201ENSMUST00000205492 1653 ntBASIC13.21□□□□□ -0.29
Rfx3P48381 Gm10457-201ENSMUST00000222619 1906 ntTSL 2 BASIC13.21□□□□□ -0.29
Rfx3P48381 Lrwd1-201ENSMUST00000006301 2473 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Rfx3P48381 Ralgapb-203ENSMUST00000109486 8383 ntAPPRIS P2 TSL 1 (best) BASIC13.21□□□□□ -0.29
Rfx3P48381 Ascc3-201ENSMUST00000035606 7760 ntAPPRIS P1 TSL 5 BASIC13.21□□□□□ -0.29
Rfx3P48381 Tsc2-217ENSMUST00000227745 5598 ntAPPRIS ALT2 BASIC13.21□□□□□ -0.29
Rfx3P48381 Ptdss1-201ENSMUST00000021990 3424 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Rfx3P48381 Cyb5r1-201ENSMUST00000027726 1837 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Rfx3P48381 Secisbp2l-201ENSMUST00000053699 6797 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Rfx3P48381 Lifr-201ENSMUST00000067190 4143 ntAPPRIS P3 TSL 1 (best) BASIC13.21□□□□□ -0.29
Rfx3P48381 Rspry1-207ENSMUST00000212729 2800 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Rfx3P48381 Eomes-201ENSMUST00000035020 3560 ntAPPRIS P3 TSL 1 (best) BASIC13.21□□□□□ -0.29
Rfx3P48381 Slc38a6-204ENSMUST00000126488 589 ntTSL 5 BASIC13.21□□□□□ -0.29
Rfx3P48381 Gm15635-203ENSMUST00000148972 554 ntTSL 2 BASIC13.21□□□□□ -0.29
Rfx3P48381 Rhox13-201ENSMUST00000152730 876 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Rfx3P48381 Gm26549-201ENSMUST00000181112 1209 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Rfx3P48381 Gm20337-201ENSMUST00000219062 1118 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Retrieved 100 of 76,532 protein–RNA pairs in 32.7 ms