Protein–RNA interactions for Protein: P46935

Nedd4, E3 ubiquitin-protein ligase NEDD4, mousemouse

Known RBP Predictions only

Length 887 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nedd4P46935 Myo5a-214ENSMUST00000155282 6372 ntAPPRIS P5 TSL 5 BASIC17.5■□□□□ 0.39
Nedd4P46935 Usp35-202ENSMUST00000168435 3982 ntAPPRIS P1 TSL 5 BASIC17.5■□□□□ 0.39
Nedd4P46935 Arntl2-204ENSMUST00000111639 2923 ntAPPRIS P3 TSL 5 BASIC17.5■□□□□ 0.39
Nedd4P46935 Aire-216ENSMUST00000156417 1627 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Nedd4P46935 Sgsm2-202ENSMUST00000081799 4873 ntAPPRIS ALT2 TSL 5 BASIC17.5■□□□□ 0.39
Nedd4P46935 Crem-239ENSMUST00000165086 2778 ntTSL 5 BASIC17.5■□□□□ 0.39
Nedd4P46935 Zbtb7c-201ENSMUST00000058997 4569 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Nedd4P46935 Sh3bp2-203ENSMUST00000118545 3034 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
Nedd4P46935 Atxn7l2-203ENSMUST00000117784 2387 ntAPPRIS P2 TSL 1 (best) BASIC17.5■□□□□ 0.39
Nedd4P46935 Upf1-202ENSMUST00000215817 4518 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
Nedd4P46935 Dtx2-204ENSMUST00000111145 2493 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
Nedd4P46935 Sorcs3-201ENSMUST00000078880 5634 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Nedd4P46935 Cyp2d11-201ENSMUST00000170255 1590 ntAPPRIS P1 TSL 5 BASIC17.49■□□□□ 0.39
Nedd4P46935 Oas1b-201ENSMUST00000086377 1832 ntTSL 5 BASIC17.49■□□□□ 0.39
Nedd4P46935 Arfgap2-202ENSMUST00000080008 3068 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Nedd4P46935 Cpne6-203ENSMUST00000165262 2178 ntAPPRIS ALT1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Nedd4P46935 Shq1-202ENSMUST00000113312 6816 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Nedd4P46935 Trmt2a-203ENSMUST00000115640 2367 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
Nedd4P46935 Gm11814-201ENSMUST00000119515 929 ntBASIC17.49■□□□□ 0.39
Nedd4P46935 Neat1-203ENSMUST00000174829 1030 ntTSL 5 BASIC17.49■□□□□ 0.39
Nedd4P46935 1700113H08Rik-202ENSMUST00000189456 974 ntTSL 5 BASIC17.49■□□□□ 0.39
Nedd4P46935 Fxyd1-217ENSMUST00000206860 594 ntAPPRIS P1 TSL 5 BASIC17.49■□□□□ 0.39
Nedd4P46935 Gm39318-201ENSMUST00000214606 1118 ntTSL 3 BASIC17.49■□□□□ 0.39
Nedd4P46935 Txn1-201ENSMUST00000030051 1051 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Nedd4P46935 Cog8-201ENSMUST00000034391 2954 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Nedd4P46935 Mbtd1-201ENSMUST00000063645 2138 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Nedd4P46935 Fam241b-202ENSMUST00000064050 1096 ntAPPRIS P1 TSL 5 BASIC17.49■□□□□ 0.39
Nedd4P46935 Mdk-203ENSMUST00000090602 714 ntAPPRIS P1 TSL 5 BASIC17.49■□□□□ 0.39
Nedd4P46935 Eda-202ENSMUST00000113775 5088 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Nedd4P46935 Kdm5b-203ENSMUST00000112198 5413 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
Nedd4P46935 Kctd15-203ENSMUST00000108070 2409 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Nedd4P46935 Nfkbie-201ENSMUST00000024742 2422 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Nedd4P46935 Pola2-201ENSMUST00000025752 2424 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Nedd4P46935 Stam-202ENSMUST00000102960 5000 ntAPPRIS P2 TSL 1 (best) BASIC17.49■□□□□ 0.39
Nedd4P46935 Trim34b-201ENSMUST00000106847 1827 ntAPPRIS P2 TSL 1 (best) BASIC17.49■□□□□ 0.39
Nedd4P46935 Snx14-206ENSMUST00000173039 2970 ntTSL 5 BASIC17.49■□□□□ 0.39
Nedd4P46935 Tcf3-202ENSMUST00000020379 2829 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
Nedd4P46935 Pxn-201ENSMUST00000067268 3706 ntAPPRIS P3 TSL 1 (best) BASIC17.48■□□□□ 0.39
Nedd4P46935 Dera-207ENSMUST00000203693 1446 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Nedd4P46935 Exo5-204ENSMUST00000177880 1969 ntAPPRIS P1 TSL 2 BASIC17.48■□□□□ 0.39
Nedd4P46935 Exo5-201ENSMUST00000030375 1996 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Nedd4P46935 Col18a1-202ENSMUST00000081654 5063 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Nedd4P46935 Prss45-201ENSMUST00000011391 1232 ntAPPRIS P2 TSL 1 (best) BASIC17.48■□□□□ 0.39
Nedd4P46935 Gm16282-201ENSMUST00000162641 451 ntTSL 3 BASIC17.48■□□□□ 0.39
Nedd4P46935 U2af1l4-216ENSMUST00000166510 835 ntTSL 5 BASIC17.48■□□□□ 0.39
Nedd4P46935 Gm8652-201ENSMUST00000181363 964 ntBASIC17.48■□□□□ 0.39
Nedd4P46935 AC153872.1-201ENSMUST00000199539 128 ntBASIC17.48■□□□□ 0.39
Nedd4P46935 Gm42906-201ENSMUST00000202365 408 ntAPPRIS P1 TSL 5 BASIC17.48■□□□□ 0.39
Nedd4P46935 Olfr707-201ENSMUST00000088687 924 ntAPPRIS P1 BASIC17.48■□□□□ 0.39
Nedd4P46935 Olfr1532-ps1-201ENSMUST00000098140 924 ntAPPRIS P1 BASIC17.48■□□□□ 0.39
Nedd4P46935 Gk5-201ENSMUST00000085217 2815 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
Nedd4P46935 Prkar2b-202ENSMUST00000036497 3378 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Nedd4P46935 Unc5a-201ENSMUST00000026994 3995 ntAPPRIS P3 TSL 1 (best) BASIC17.48■□□□□ 0.39
Nedd4P46935 Arl6-202ENSMUST00000099646 1554 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Nedd4P46935 0610010F05Rik-203ENSMUST00000109532 4106 ntAPPRIS P2 TSL 5 BASIC17.48■□□□□ 0.39
Nedd4P46935 Gm3373-202ENSMUST00000177556 1955 ntAPPRIS P5 TSL 5 BASIC17.48■□□□□ 0.39
Nedd4P46935 Gm3500-201ENSMUST00000177986 1955 ntAPPRIS P1 TSL 5 BASIC17.48■□□□□ 0.39
Nedd4P46935 Cndp2-202ENSMUST00000168419 2088 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Nedd4P46935 Hbegf-201ENSMUST00000025363 2373 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Nedd4P46935 Smad3-201ENSMUST00000034973 5090 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Nedd4P46935 Cep19-202ENSMUST00000115168 1718 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Nedd4P46935 Actg1-204ENSMUST00000106215 1827 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Nedd4P46935 Mms22l-202ENSMUST00000108222 4478 ntAPPRIS P1 TSL 5 BASIC17.47■□□□□ 0.39
Nedd4P46935 Pkig-203ENSMUST00000109400 1059 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Nedd4P46935 Gm5940-201ENSMUST00000117582 1068 ntBASIC17.47■□□□□ 0.39
Nedd4P46935 Wisp1-202ENSMUST00000118823 708 ntTSL 5 BASIC17.47■□□□□ 0.39
Nedd4P46935 Nfya-203ENSMUST00000159063 1255 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Nedd4P46935 Fam24a-203ENSMUST00000207784 600 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Nedd4P46935 Gm8463-201ENSMUST00000208573 613 ntBASIC17.47■□□□□ 0.39
Nedd4P46935 Gm29154-230ENSMUST00000215044 1165 ntTSL 5 BASIC17.47■□□□□ 0.39
Nedd4P46935 Gm9182-201ENSMUST00000217829 639 ntBASIC17.47■□□□□ 0.39
Nedd4P46935 Gm7399-201ENSMUST00000032395 858 ntBASIC17.47■□□□□ 0.39
Nedd4P46935 Lyzl4-201ENSMUST00000077706 996 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Nedd4P46935 Gm6091-201ENSMUST00000098307 165 ntBASIC17.47■□□□□ 0.39
Nedd4P46935 Ank3-223ENSMUST00000182557 1569 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Nedd4P46935 1600020E01Rik-207ENSMUST00000204738 1997 ntTSL 5 BASIC17.47■□□□□ 0.39
Nedd4P46935 Gch1-201ENSMUST00000089959 2775 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Nedd4P46935 Bloc1s3-201ENSMUST00000077408 3188 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Nedd4P46935 Nrip1-201ENSMUST00000054178 4529 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Nedd4P46935 Dgkz-202ENSMUST00000099709 3512 ntAPPRIS ALT2 TSL 5 BASIC17.47■□□□□ 0.39
Nedd4P46935 Lrch3-210ENSMUST00000170201 2902 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
Nedd4P46935 Retsat-205ENSMUST00000176364 1647 ntTSL 5 BASIC17.47■□□□□ 0.39
Nedd4P46935 Phyh-201ENSMUST00000027975 1438 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Nedd4P46935 Tmem248-202ENSMUST00000111298 3570 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Nedd4P46935 Nrg1-218ENSMUST00000209107 2972 ntAPPRIS ALT2 TSL 5 BASIC17.46■□□□□ 0.39
Nedd4P46935 Trpv4-203ENSMUST00000112219 2295 ntTSL 5 BASIC17.46■□□□□ 0.39
Nedd4P46935 Nkpd1-202ENSMUST00000207576 2916 ntAPPRIS P2 TSL 5 BASIC17.46■□□□□ 0.39
Nedd4P46935 Chst2-201ENSMUST00000036267 7328 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Nedd4P46935 Cactin-201ENSMUST00000050867 2715 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Nedd4P46935 Ypel3-203ENSMUST00000106357 1594 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Nedd4P46935 Hsf4-206ENSMUST00000173859 1576 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
Nedd4P46935 Zfp764-201ENSMUST00000059199 2508 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Nedd4P46935 Sept1-202ENSMUST00000106314 1486 ntAPPRIS P2 TSL 1 (best) BASIC17.46■□□□□ 0.39
Nedd4P46935 Aqp8-201ENSMUST00000033023 1487 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.39
Nedd4P46935 Ripk1-201ENSMUST00000021844 3266 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Nedd4P46935 Dnajb5-201ENSMUST00000037872 3291 ntAPPRIS ALT2 TSL 5 BASIC17.46■□□□□ 0.39
Nedd4P46935 Zfp879-202ENSMUST00000109133 2229 ntTSL 5 BASIC17.46■□□□□ 0.39
Nedd4P46935 Ttc13-202ENSMUST00000117624 3096 ntTSL 5 BASIC17.46■□□□□ 0.39
Nedd4P46935 Tmem254b-202ENSMUST00000100806 1108 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
Nedd4P46935 Tmem254a-201ENSMUST00000100811 1108 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
Retrieved 100 of 76,532 protein–RNA pairs in 69.6 ms