Protein–RNA interactions for Protein: P41233

Abca1, ATP-binding cassette sub-family A member 1, mousemouse

Predictions only

Length 2,261 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Abca1P41233 A230060F14Rik-202ENSMUST00000190739 1889 ntBASIC12.2□□□□□ -0.46
Abca1P41233 B9d2-202ENSMUST00000205325 593 ntTSL 2 BASIC12.2□□□□□ -0.46
Abca1P41233 Bet1l-209ENSMUST00000211624 769 ntTSL 3 BASIC12.2□□□□□ -0.46
Abca1P41233 Pim2-204ENSMUST00000223553 1113 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Abca1P41233 Denr-201ENSMUST00000023869 2339 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Abca1P41233 Lce1d-201ENSMUST00000029524 678 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Abca1P41233 Rps15-201ENSMUST00000062674 572 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Abca1P41233 Itgb1-201ENSMUST00000090006 3815 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Abca1P41233 Zfp651-201ENSMUST00000093772 6353 ntAPPRIS P1 TSL 5 BASIC12.2□□□□□ -0.46
Abca1P41233 Pnkp-202ENSMUST00000098478 1550 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Abca1P41233 Dpagt1-201ENSMUST00000054708 2205 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Abca1P41233 Gm44729-201ENSMUST00000206759 2052 ntBASIC12.19□□□□□ -0.46
Abca1P41233 Slc38a7-201ENSMUST00000040481 3333 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Abca1P41233 Synm-204ENSMUST00000208231 4457 ntAPPRIS ALT2 TSL 1 (best) BASIC12.19□□□□□ -0.46
Abca1P41233 Vldlr-207ENSMUST00000167487 7971 ntAPPRIS P3 TSL 1 (best) BASIC12.19□□□□□ -0.46
Abca1P41233 Cbfb-203ENSMUST00000109394 2487 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Abca1P41233 R74862-202ENSMUST00000133630 2482 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Abca1P41233 Gm26821-201ENSMUST00000181954 2652 ntTSL 5 BASIC12.19□□□□□ -0.46
Abca1P41233 Dera-201ENSMUST00000087675 1729 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Abca1P41233 Trim27-201ENSMUST00000021761 4204 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Abca1P41233 Trio-201ENSMUST00000090247 11495 ntAPPRIS P1 TSL 5 BASIC12.19□□□□□ -0.46
Abca1P41233 Akt2-ps-201ENSMUST00000120718 1449 ntBASIC12.19□□□□□ -0.46
Abca1P41233 Fdx1-202ENSMUST00000214013 2759 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Abca1P41233 Slfnl1-201ENSMUST00000062990 1762 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Abca1P41233 Nt5e-201ENSMUST00000034992 3995 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Abca1P41233 Gfpt1-202ENSMUST00000113655 1255 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Abca1P41233 4930417O22Rik-201ENSMUST00000123249 1184 ntTSL 2 BASIC12.19□□□□□ -0.46
Abca1P41233 Pkig-209ENSMUST00000164399 983 ntAPPRIS P1 TSL 2 BASIC12.19□□□□□ -0.46
Abca1P41233 Gltpd2-202ENSMUST00000179000 794 ntAPPRIS ALT2 TSL 2 BASIC12.19□□□□□ -0.46
Abca1P41233 Gtpbp10-211ENSMUST00000198799 648 ntBASIC12.19□□□□□ -0.46
Abca1P41233 Rab32-201ENSMUST00000019974 2149 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Abca1P41233 AC151828.1-201ENSMUST00000219552 661 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Abca1P41233 AC130829.1-201ENSMUST00000221548 494 ntBASIC12.19□□□□□ -0.46
Abca1P41233 Cfd-201ENSMUST00000061653 922 ntAPPRIS P2 TSL 1 (best) BASIC12.19□□□□□ -0.46
Abca1P41233 Neurl1a-201ENSMUST00000111807 3679 ntAPPRIS ALT2 TSL 1 (best) BASIC12.19□□□□□ -0.46
Abca1P41233 Blzf1-202ENSMUST00000086032 1602 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Abca1P41233 Traf5-201ENSMUST00000085573 1964 ntAPPRIS P1 TSL 5 BASIC12.19□□□□□ -0.46
Abca1P41233 Rnf123-214ENSMUST00000162355 4727 ntAPPRIS ALT2 TSL 1 (best) BASIC12.19□□□□□ -0.46
Abca1P41233 Nrxn1-216ENSMUST00000174331 6282 ntAPPRIS ALT1 TSL 5 BASIC12.19□□□□□ -0.46
Abca1P41233 Ulk1-211ENSMUST00000200299 3581 ntAPPRIS ALT2 TSL 1 (best) BASIC12.19□□□□□ -0.46
Abca1P41233 5730559C18Rik-201ENSMUST00000120339 2988 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Abca1P41233 Cend1-202ENSMUST00000124444 1733 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Abca1P41233 Mpp3-201ENSMUST00000062801 2848 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Abca1P41233 Anks1b-214ENSMUST00000182356 7561 ntTSL 5 BASIC12.19□□□□□ -0.46
Abca1P41233 Klf4-201ENSMUST00000107619 3029 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Abca1P41233 Egfl7-212ENSMUST00000166920 1391 ntAPPRIS P4 TSL 1 (best) BASIC12.19□□□□□ -0.46
Abca1P41233 Vldlr-208ENSMUST00000172302 3855 ntAPPRIS ALT1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Abca1P41233 Sbk2-205ENSMUST00000208109 1422 ntTSL 5 BASIC12.19□□□□□ -0.46
Abca1P41233 Zfp839-201ENSMUST00000170060 3723 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Abca1P41233 Atp11b-201ENSMUST00000029257 4868 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Abca1P41233 Tmem251-201ENSMUST00000057416 3367 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Abca1P41233 Hist1h4n-201ENSMUST00000102979 430 ntAPPRIS P1 BASIC12.18□□□□□ -0.46
Abca1P41233 Hist1h4m-201ENSMUST00000104941 402 ntAPPRIS P1 BASIC12.18□□□□□ -0.46
Abca1P41233 Rab4a-201ENSMUST00000117702 1080 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Abca1P41233 Mrps18c-201ENSMUST00000016977 638 ntAPPRIS P2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Abca1P41233 Cdk2ap2-204ENSMUST00000174514 669 ntTSL 2 BASIC12.18□□□□□ -0.46
Abca1P41233 Gm28630-201ENSMUST00000187806 498 ntBASIC12.18□□□□□ -0.46
Abca1P41233 Cks1b-201ENSMUST00000029679 849 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Abca1P41233 Trappc4-201ENSMUST00000034623 1220 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Abca1P41233 Gm5519-201ENSMUST00000042061 513 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Abca1P41233 Hfe-201ENSMUST00000006787 516 ntTSL 5 BASIC12.18□□□□□ -0.46
Abca1P41233 Hfe-203ENSMUST00000091707 816 ntTSL 5 BASIC12.18□□□□□ -0.46
Abca1P41233 D930028M14Rik-201ENSMUST00000098678 1003 ntTSL 2 BASIC12.18□□□□□ -0.46
Abca1P41233 Plcl1-201ENSMUST00000042986 6580 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Abca1P41233 Trim11-201ENSMUST00000093061 2251 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Abca1P41233 Ovca2-201ENSMUST00000071562 2670 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Abca1P41233 Slc35e2-201ENSMUST00000043829 2910 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Abca1P41233 Nelfa-201ENSMUST00000030993 2580 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Abca1P41233 Myc-202ENSMUST00000159327 2186 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Abca1P41233 Rab11fip1-202ENSMUST00000054212 7965 ntAPPRIS P3 TSL 5 BASIC12.18□□□□□ -0.46
Abca1P41233 Nacad-201ENSMUST00000045713 4892 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Abca1P41233 Anapc2-201ENSMUST00000028341 3004 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Abca1P41233 Nsd3-207ENSMUST00000143445 2416 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Abca1P41233 Wac-215ENSMUST00000171042 2205 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Abca1P41233 Srcin1-202ENSMUST00000107593 3733 ntAPPRIS ALT2 TSL 5 BASIC12.18□□□□□ -0.46
Abca1P41233 Gm45293-201ENSMUST00000209754 1812 ntBASIC12.18□□□□□ -0.46
Abca1P41233 Ccdc68-201ENSMUST00000043929 1618 ntAPPRIS P2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Abca1P41233 Catip-204ENSMUST00000191010 1866 ntAPPRIS ALT2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Abca1P41233 Thap12-201ENSMUST00000033009 3723 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Abca1P41233 Enah-212ENSMUST00000195059 2832 ntAPPRIS ALT2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Abca1P41233 Usp1-202ENSMUST00000091358 3527 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Abca1P41233 Sox17-201ENSMUST00000027035 3127 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Abca1P41233 Gm14127-201ENSMUST00000117906 678 ntBASIC12.18□□□□□ -0.46
Abca1P41233 Gm15384-201ENSMUST00000138832 486 ntTSL 5 BASIC12.18□□□□□ -0.46
Abca1P41233 Gm25144-201ENSMUST00000179561 110 ntBASIC12.18□□□□□ -0.46
Abca1P41233 Gm25352-201ENSMUST00000179815 110 ntBASIC12.18□□□□□ -0.46
Abca1P41233 Gm29202-201ENSMUST00000191263 422 ntTSL 5 BASIC12.18□□□□□ -0.46
Abca1P41233 Gm18187-201ENSMUST00000196476 984 ntBASIC12.18□□□□□ -0.46
Abca1P41233 0610005C13Rik-201ENSMUST00000209416 856 ntTSL 5 BASIC12.18□□□□□ -0.46
Abca1P41233 AC135669.1-201ENSMUST00000213585 412 ntBASIC12.18□□□□□ -0.46
Abca1P41233 AC151971.1-201ENSMUST00000217329 993 ntTSL 5 BASIC12.18□□□□□ -0.46
Abca1P41233 Aif1-201ENSMUST00000025257 847 ntAPPRIS P1 TSL 2 BASIC12.18□□□□□ -0.46
Abca1P41233 Dhx9-202ENSMUST00000186380 4561 ntAPPRIS P2 TSL 2 BASIC12.18□□□□□ -0.46
Abca1P41233 Olfr718-ps1-203ENSMUST00000215102 4913 ntAPPRIS P5 TSL 5 BASIC12.18□□□□□ -0.46
Abca1P41233 Majin-202ENSMUST00000113528 1562 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Abca1P41233 Stpg1-201ENSMUST00000063707 2380 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Abca1P41233 Rps6ka5-201ENSMUST00000043599 4406 ntAPPRIS P2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Abca1P41233 Canx-201ENSMUST00000020637 3779 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Abca1P41233 4930513N10Rik-203ENSMUST00000145562 2803 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Abca1P41233 H2-Q4-201ENSMUST00000081435 1793 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Retrieved 100 of 76,532 protein–RNA pairs in 27.4 ms