Protein–RNA interactions for Protein: P40645

Sox6, Transcription factor SOX-6, mousemouse

Predictions only

Length 827 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox6P40645 Hdhd2-203ENSMUST00000097522 2318 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Sox6P40645 Ate1-201ENSMUST00000033139 4735 ntAPPRIS P4 TSL 1 (best) BASIC13.78□□□□□ -0.2
Sox6P40645 Mdfic-201ENSMUST00000101663 3431 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.2
Sox6P40645 Mdfic-206ENSMUST00000189359 3435 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.2
Sox6P40645 Mdfic-207ENSMUST00000190255 3431 ntTSL 1 (best) BASIC13.77□□□□□ -0.2
Sox6P40645 Fbrs-202ENSMUST00000205432 4166 ntAPPRIS ALT2 TSL 5 BASIC13.77□□□□□ -0.2
Sox6P40645 Gid4-201ENSMUST00000070681 4283 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.2
Sox6P40645 Aatk-201ENSMUST00000064307 5336 ntAPPRIS ALT2 TSL 1 (best) BASIC13.77□□□□□ -0.2
Sox6P40645 Olfr607-202ENSMUST00000214347 5706 ntAPPRIS P5 TSL 5 BASIC13.77□□□□□ -0.2
Sox6P40645 Aff4-201ENSMUST00000060945 10099 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.2
Sox6P40645 Loxl2-202ENSMUST00000100420 3042 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Sox6P40645 Zmym3-204ENSMUST00000118092 1502 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
Sox6P40645 R3hcc1-201ENSMUST00000118374 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC13.77□□□□□ -0.21
Sox6P40645 Gm11764-201ENSMUST00000120221 623 ntBASIC13.77□□□□□ -0.21
Sox6P40645 Sec22b-202ENSMUST00000122288 1177 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
Sox6P40645 E230016M11Rik-201ENSMUST00000130657 1764 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
Sox6P40645 Zkscan17-201ENSMUST00000013262 4064 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Sox6P40645 Gm17114-201ENSMUST00000164716 511 ntTSL 3 BASIC13.77□□□□□ -0.21
Sox6P40645 Ntng2-210ENSMUST00000177689 1679 ntAPPRIS ALT2 TSL 5 BASIC13.77□□□□□ -0.21
Sox6P40645 Flg-204ENSMUST00000178752 756 ntAPPRIS ALT2 BASIC13.77□□□□□ -0.21
Sox6P40645 1810008I18Rik-202ENSMUST00000187848 819 ntTSL 3 BASIC13.77□□□□□ -0.21
Sox6P40645 Tmco1-204ENSMUST00000195015 1573 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Sox6P40645 Stard3nl-208ENSMUST00000200323 1128 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
Sox6P40645 Derl3-202ENSMUST00000217811 1316 ntAPPRIS ALT2 TSL 1 (best) BASIC13.77□□□□□ -0.21
Sox6P40645 Nupl1-207ENSMUST00000225311 2475 ntBASIC13.77□□□□□ -0.21
Sox6P40645 AC151836.1-202ENSMUST00000226259 753 ntBASIC13.77□□□□□ -0.21
Sox6P40645 Nde1-201ENSMUST00000023359 2287 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Sox6P40645 Sod1-201ENSMUST00000023707 646 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Sox6P40645 Fech-201ENSMUST00000025484 2901 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Sox6P40645 Psmc4-201ENSMUST00000032824 1440 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Sox6P40645 Zdhhc7-201ENSMUST00000034280 3069 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Sox6P40645 Ndufv1-201ENSMUST00000042497 1661 ntAPPRIS P2 TSL 1 (best) BASIC13.77□□□□□ -0.21
Sox6P40645 Gjb1-201ENSMUST00000052130 1565 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Sox6P40645 Ythdf2-201ENSMUST00000085181 955 ntTSL 2 BASIC13.77□□□□□ -0.21
Sox6P40645 Dmkn-203ENSMUST00000085688 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC13.77□□□□□ -0.21
Sox6P40645 Psma5-201ENSMUST00000090569 1239 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Sox6P40645 Pprc1-202ENSMUST00000099392 3956 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
Sox6P40645 Yes1-201ENSMUST00000072311 4586 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Sox6P40645 Pear1-205ENSMUST00000172621 4490 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Sox6P40645 Tle3-215ENSMUST00000162583 4299 ntAPPRIS ALT1 TSL 5 BASIC13.77□□□□□ -0.21
Sox6P40645 Ccser2-202ENSMUST00000090024 7509 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Sox6P40645 Bdp1-201ENSMUST00000038104 9921 ntAPPRIS P2 TSL 5 BASIC13.76□□□□□ -0.21
Sox6P40645 Gtdc1-202ENSMUST00000100127 2422 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
Sox6P40645 Gm26546-201ENSMUST00000181000 4276 ntTSL 5 BASIC13.76□□□□□ -0.21
Sox6P40645 Nucb1-201ENSMUST00000033096 2111 ntAPPRIS ALT2 TSL 5 BASIC13.76□□□□□ -0.21
Sox6P40645 Pcbp3-201ENSMUST00000001148 2013 ntAPPRIS P3 TSL 1 (best) BASIC13.76□□□□□ -0.21
Sox6P40645 Syt12-201ENSMUST00000059295 3581 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Sox6P40645 Fam174a-202ENSMUST00000186780 3460 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Sox6P40645 Gli2-201ENSMUST00000062483 6637 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Sox6P40645 Clns1a-201ENSMUST00000026506 1504 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Sox6P40645 Pds5b-201ENSMUST00000016569 7417 ntAPPRIS P3 TSL 1 (best) BASIC13.76□□□□□ -0.21
Sox6P40645 Tmem108-204ENSMUST00000189588 2850 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Sox6P40645 Asxl1-201ENSMUST00000109790 6968 ntAPPRIS P2 TSL 5 BASIC13.76□□□□□ -0.21
Sox6P40645 Cep55-203ENSMUST00000169673 2761 ntAPPRIS ALT2 TSL 1 (best) BASIC13.76□□□□□ -0.21
Sox6P40645 Gm38391-201ENSMUST00000191720 4069 ntBASIC13.76□□□□□ -0.21
Sox6P40645 Gm26850-201ENSMUST00000181653 2669 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
Sox6P40645 Nat8f3-202ENSMUST00000168531 1347 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Sox6P40645 Dtd2-201ENSMUST00000021339 2564 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Sox6P40645 Gm6184-201ENSMUST00000120403 1261 ntBASIC13.76□□□□□ -0.21
Sox6P40645 4930481B07Rik-201ENSMUST00000128160 1089 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
Sox6P40645 Gm11467-201ENSMUST00000129407 674 ntTSL 3 BASIC13.76□□□□□ -0.21
Sox6P40645 Gm15677-201ENSMUST00000152302 766 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
Sox6P40645 Csrp3-202ENSMUST00000167786 899 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Sox6P40645 Gm18489-201ENSMUST00000172565 551 ntBASIC13.76□□□□□ -0.21
Sox6P40645 4930519L02Rik-201ENSMUST00000197683 619 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
Sox6P40645 Tmem270-202ENSMUST00000201316 847 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Sox6P40645 Gm7787-201ENSMUST00000216858 688 ntBASIC13.76□□□□□ -0.21
Sox6P40645 Gm2270-201ENSMUST00000222858 797 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
Sox6P40645 Hdac5-203ENSMUST00000107151 4852 ntTSL 5 BASIC13.76□□□□□ -0.21
Sox6P40645 Lancl1-202ENSMUST00000113979 4461 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Sox6P40645 Cpsf6-206ENSMUST00000176670 2227 ntTSL 5 BASIC13.76□□□□□ -0.21
Sox6P40645 Wdr46-201ENSMUST00000025170 2227 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Sox6P40645 Foxo4-201ENSMUST00000062000 3162 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Sox6P40645 Zfp664-201ENSMUST00000111417 4092 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Sox6P40645 Galnt4-201ENSMUST00000161240 5089 ntAPPRIS P1 BASIC13.76□□□□□ -0.21
Sox6P40645 Klk7-201ENSMUST00000032955 1895 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Sox6P40645 Bbs7-203ENSMUST00000108156 2687 ntAPPRIS P2 TSL 1 (best) BASIC13.76□□□□□ -0.21
Sox6P40645 2610206C17Rik-201ENSMUST00000129059 1717 ntTSL 2 BASIC13.76□□□□□ -0.21
Sox6P40645 Zfp365-201ENSMUST00000064656 4259 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Sox6P40645 Map3k14-201ENSMUST00000021324 4246 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Sox6P40645 Palm3-201ENSMUST00000055077 2452 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Sox6P40645 Cacna1g-202ENSMUST00000100561 8125 ntAPPRIS P3 TSL 1 (best) BASIC13.75□□□□□ -0.21
Sox6P40645 Ptpn2-201ENSMUST00000025420 1568 ntAPPRIS P3 TSL 1 (best) BASIC13.75□□□□□ -0.21
Sox6P40645 Grm7-201ENSMUST00000071076 3127 ntAPPRIS ALT1 TSL 5 BASIC13.75□□□□□ -0.21
Sox6P40645 Odf2-203ENSMUST00000113755 2305 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
Sox6P40645 Fhod3-201ENSMUST00000037097 5408 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Sox6P40645 1700051A21Rik-201ENSMUST00000147937 1516 ntTSL 5 BASIC13.75□□□□□ -0.21
Sox6P40645 Asprv1-201ENSMUST00000043400 1547 ntAPPRIS P1 BASIC13.75□□□□□ -0.21
Sox6P40645 4933434E20Rik-203ENSMUST00000068798 1500 ntTSL 5 BASIC13.75□□□□□ -0.21
Sox6P40645 Pgd-201ENSMUST00000084124 2218 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Sox6P40645 AC122301.2-201ENSMUST00000219020 1474 ntTSL 5 BASIC13.75□□□□□ -0.21
Sox6P40645 Arhgap33-203ENSMUST00000207858 4337 ntAPPRIS ALT2 TSL 1 (best) BASIC13.75□□□□□ -0.21
Sox6P40645 A230072C01Rik-202ENSMUST00000136447 1412 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
Sox6P40645 Nr2f2-201ENSMUST00000032768 4222 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Sox6P40645 Specc1-202ENSMUST00000092415 6797 ntAPPRIS ALT2 TSL 5 BASIC13.75□□□□□ -0.21
Sox6P40645 Unc93b1-204ENSMUST00000165711 1991 ntAPPRIS ALT2 TSL 5 BASIC13.75□□□□□ -0.21
Sox6P40645 Osbpl8-202ENSMUST00000105275 7204 ntAPPRIS ALT1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Sox6P40645 Atp2a3-202ENSMUST00000108484 4467 ntAPPRIS ALT2 TSL 5 BASIC13.75□□□□□ -0.21
Sox6P40645 Znrf1-203ENSMUST00000168428 4451 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Sox6P40645 Ndufs7-202ENSMUST00000105364 983 ntAPPRIS P1 TSL 5 BASIC13.75□□□□□ -0.21
Retrieved 100 of 76,532 protein–RNA pairs in 39.8 ms