Protein–RNA interactions for Protein: P40630

Tfam, Transcription factor A, mitochondrial, mousemouse

Predictions only

Length 243 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TfamP40630 Csrp3-202ENSMUST00000167786 899 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
TfamP40630 Gm28411-202ENSMUST00000191318 464 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
TfamP40630 5430427M07Rik-202ENSMUST00000221524 1023 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
TfamP40630 Gm15590-201ENSMUST00000078419 552 ntBASIC14.19□□□□□ -0.14
TfamP40630 Pcdha11-201ENSMUST00000115658 5359 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
TfamP40630 Fstl4-201ENSMUST00000036796 4380 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
TfamP40630 Csnk1g2-202ENSMUST00000085435 1825 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
TfamP40630 Pank4-201ENSMUST00000030931 2508 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
TfamP40630 Dlg4-201ENSMUST00000018700 3204 ntAPPRIS P3 TSL 1 (best) BASIC14.19□□□□□ -0.14
TfamP40630 Msx3-201ENSMUST00000055353 2356 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
TfamP40630 Kirrel-203ENSMUST00000159976 7236 ntAPPRIS P2 TSL 1 (best) BASIC14.19□□□□□ -0.14
TfamP40630 Prkcz-201ENSMUST00000030922 2641 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
TfamP40630 Srcin1-202ENSMUST00000107593 3733 ntAPPRIS ALT2 TSL 5 BASIC14.19□□□□□ -0.14
TfamP40630 Prpf31-202ENSMUST00000108636 1798 ntTSL 5 BASIC14.19□□□□□ -0.14
TfamP40630 Plod2-203ENSMUST00000160359 3663 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
TfamP40630 Syp-201ENSMUST00000069520 2591 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
TfamP40630 Specc1-202ENSMUST00000092415 6797 ntAPPRIS ALT2 TSL 5 BASIC14.19□□□□□ -0.14
TfamP40630 Hps1-204ENSMUST00000160455 2952 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
TfamP40630 Ilf2-201ENSMUST00000001042 2027 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
TfamP40630 Acot6-201ENSMUST00000056822 3388 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
TfamP40630 Iffo1-201ENSMUST00000117675 2833 ntAPPRIS P4 TSL 1 (best) BASIC14.19□□□□□ -0.14
TfamP40630 Cyp2f2-201ENSMUST00000003100 1866 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
TfamP40630 Brix1-201ENSMUST00000022855 2664 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
TfamP40630 Tpbg-202ENSMUST00000098500 3481 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
TfamP40630 Slc4a1-201ENSMUST00000006749 4545 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
TfamP40630 Mccc2-201ENSMUST00000022148 2123 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
TfamP40630 1700029H14Rik-203ENSMUST00000134023 1319 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
TfamP40630 Sfxn4-203ENSMUST00000135808 1309 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
TfamP40630 Tbc1d22b-201ENSMUST00000048677 3592 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
TfamP40630 Ncf1-201ENSMUST00000016094 2763 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
TfamP40630 Gnpda2-202ENSMUST00000120789 1594 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
TfamP40630 Gk-201ENSMUST00000026039 4340 ntAPPRIS ALT1 TSL 1 (best) BASIC14.18□□□□□ -0.14
TfamP40630 Patz1-201ENSMUST00000057089 3118 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
TfamP40630 Necap2-201ENSMUST00000030760 1906 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
TfamP40630 Fam189b-203ENSMUST00000119707 2415 ntTSL 5 BASIC14.18□□□□□ -0.14
TfamP40630 Pth2r-201ENSMUST00000027083 2414 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
TfamP40630 Ctcflos-201ENSMUST00000142165 469 ntTSL 3 BASIC14.18□□□□□ -0.14
TfamP40630 Gm26549-201ENSMUST00000181112 1209 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
TfamP40630 Gm42670-201ENSMUST00000201816 1292 ntBASIC14.18□□□□□ -0.14
TfamP40630 Vmn2r-ps89-201ENSMUST00000209195 1010 ntBASIC14.18□□□□□ -0.14
TfamP40630 Pih1d1-206ENSMUST00000210139 1077 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
TfamP40630 AC131709.1-201ENSMUST00000224731 1180 ntBASIC14.18□□□□□ -0.14
TfamP40630 Ube2f-201ENSMUST00000059743 1154 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
TfamP40630 Itpk1-201ENSMUST00000046518 2918 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
TfamP40630 Selenon-201ENSMUST00000060435 3445 ntAPPRIS P1 TSL 5 BASIC14.18□□□□□ -0.14
TfamP40630 Lsm12-202ENSMUST00000107156 2015 ntTSL 5 BASIC14.18□□□□□ -0.14
TfamP40630 Trnt1-201ENSMUST00000057578 2283 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
TfamP40630 Osbpl11-201ENSMUST00000039733 4520 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
TfamP40630 Rbm26-201ENSMUST00000022715 3633 ntTSL 5 BASIC14.18□□□□□ -0.14
TfamP40630 Aph1a-202ENSMUST00000056710 1601 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
TfamP40630 Sema3b-204ENSMUST00000102531 2958 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
TfamP40630 Hoxaas3-202ENSMUST00000136806 2207 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
TfamP40630 Itfg1-201ENSMUST00000034140 3306 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
TfamP40630 4933433G15Rik-201ENSMUST00000180533 1481 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
TfamP40630 Nkapl-201ENSMUST00000068235 1463 ntAPPRIS P1 BASIC14.18□□□□□ -0.14
TfamP40630 Daxx-201ENSMUST00000079421 2580 ntAPPRIS P2 TSL 1 (best) BASIC14.18□□□□□ -0.14
TfamP40630 Tmem2-202ENSMUST00000096194 6667 ntAPPRIS P1 TSL 5 BASIC14.17□□□□□ -0.14
TfamP40630 Taok2-201ENSMUST00000071268 4720 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
TfamP40630 Lrrc25-201ENSMUST00000052437 1313 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
TfamP40630 Jakmip1-212ENSMUST00000174629 1941 ntTSL 5 BASIC14.17□□□□□ -0.14
TfamP40630 Etl4-207ENSMUST00000114610 2863 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
TfamP40630 Gm44645-201ENSMUST00000205492 1653 ntBASIC14.17□□□□□ -0.14
TfamP40630 Rspry1-202ENSMUST00000121101 3092 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
TfamP40630 Proser2-202ENSMUST00000114942 4398 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
TfamP40630 Nfasc-201ENSMUST00000043189 5072 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
TfamP40630 Dnm1-217ENSMUST00000202578 2820 ntAPPRIS P2 TSL 5 BASIC14.17□□□□□ -0.14
TfamP40630 Eldr-203ENSMUST00000130392 1540 ntTSL 2 BASIC14.17□□□□□ -0.14
TfamP40630 Gm5478-201ENSMUST00000100184 2566 ntAPPRIS P1 TSL 5 BASIC14.17□□□□□ -0.14
TfamP40630 Hmga2-201ENSMUST00000072777 3710 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
TfamP40630 3830417A13Rik-201ENSMUST00000033522 1649 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
TfamP40630 Rpl13-ps5-201ENSMUST00000117813 630 ntBASIC14.17□□□□□ -0.14
TfamP40630 Mcub-204ENSMUST00000153506 1005 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
TfamP40630 Gm27628-201ENSMUST00000184911 107 ntBASIC14.17□□□□□ -0.14
TfamP40630 4931406C07Rik-209ENSMUST00000217042 691 ntTSL 3 BASIC14.17□□□□□ -0.14
TfamP40630 Wdyhv1-204ENSMUST00000226955 1094 ntBASIC14.17□□□□□ -0.14
TfamP40630 Cela3a-201ENSMUST00000024200 958 ntAPPRIS P1 TSL 5 BASIC14.17□□□□□ -0.14
TfamP40630 Vkorc1-201ENSMUST00000033074 748 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
TfamP40630 Bhlha9-201ENSMUST00000056184 1207 ntAPPRIS P1 BASIC14.17□□□□□ -0.14
TfamP40630 Ythdf2-201ENSMUST00000085181 955 ntTSL 2 BASIC14.17□□□□□ -0.14
TfamP40630 Acap2-201ENSMUST00000058033 6493 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
TfamP40630 Epha2-201ENSMUST00000006614 3913 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
TfamP40630 Ccdc157-201ENSMUST00000093381 5015 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
TfamP40630 Rragb-201ENSMUST00000039720 2258 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
TfamP40630 Rhpn1-201ENSMUST00000023244 1932 ntAPPRIS P3 TSL 1 (best) BASIC14.17□□□□□ -0.14
TfamP40630 Myocd-202ENSMUST00000102635 4935 ntAPPRIS P3 TSL 1 (best) BASIC14.17□□□□□ -0.14
TfamP40630 Slc52a3-203ENSMUST00000109859 2204 ntTSL 5 BASIC14.17□□□□□ -0.14
TfamP40630 Tpm3-201ENSMUST00000029549 2230 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
TfamP40630 2410002F23Rik-218ENSMUST00000188382 2301 ntAPPRIS P2 TSL 5 BASIC14.16□□□□□ -0.14
TfamP40630 Pycr1-201ENSMUST00000026133 1861 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
TfamP40630 Pcsk4-201ENSMUST00000020340 2539 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
TfamP40630 Unc93b1-204ENSMUST00000165711 1991 ntAPPRIS ALT2 TSL 5 BASIC14.16□□□□□ -0.14
TfamP40630 Phtf2-201ENSMUST00000118174 4840 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
TfamP40630 Nfya-206ENSMUST00000160319 1407 ntTSL 5 BASIC14.16□□□□□ -0.14
TfamP40630 Palld-203ENSMUST00000121493 5445 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
TfamP40630 Cbarp-215ENSMUST00000170219 2941 ntAPPRIS P2 TSL 5 BASIC14.16□□□□□ -0.14
TfamP40630 Pcsk6-202ENSMUST00000098391 4207 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
TfamP40630 Aptx-201ENSMUST00000030119 5250 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
TfamP40630 Sorbs3-204ENSMUST00000227929 2460 ntBASIC14.16□□□□□ -0.14
TfamP40630 Atp2a2-202ENSMUST00000177974 3984 ntAPPRIS ALT1 TSL 1 (best) BASIC14.16□□□□□ -0.14
TfamP40630 Fkbp10-201ENSMUST00000001595 2584 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Retrieved 100 of 76,532 protein–RNA pairs in 40.6 ms