Protein–RNA interactions for Protein: P31313

Hoxc11, Homeobox protein Hox-C11, mousemouse

Predictions only

Length 304 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxc11P31313 Pid1-207ENSMUST00000177458 2521 ntTSL 2 BASIC14.2□□□□□ -0.14
Hoxc11P31313 Hnf1b-203ENSMUST00000108114 2659 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Hoxc11P31313 Mpp3-201ENSMUST00000062801 2848 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Hoxc11P31313 Stra8-201ENSMUST00000031876 1803 ntAPPRIS P2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Hoxc11P31313 H2-Q10-201ENSMUST00000068291 1473 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Hoxc11P31313 Rhpn1-202ENSMUST00000121137 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Hoxc11P31313 Cbarp-215ENSMUST00000170219 2941 ntAPPRIS P2 TSL 5 BASIC14.2□□□□□ -0.14
Hoxc11P31313 Trnt1-201ENSMUST00000057578 2283 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Hoxc11P31313 B3gnt3-201ENSMUST00000034260 3055 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Hoxc11P31313 Gm37691-201ENSMUST00000192147 2573 ntBASIC14.2□□□□□ -0.14
Hoxc11P31313 Zkscan3-201ENSMUST00000070785 2561 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Hoxc11P31313 Ube2v2-202ENSMUST00000115776 1236 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Hoxc11P31313 Tpm3-203ENSMUST00000119158 1090 ntTSL 3 BASIC14.2□□□□□ -0.14
Hoxc11P31313 Mir7023-201ENSMUST00000185093 64 ntBASIC14.2□□□□□ -0.14
Hoxc11P31313 Pecr-201ENSMUST00000027381 1186 ntAPPRIS P2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Hoxc11P31313 D6Ertd527e-204ENSMUST00000204927 2218 ntAPPRIS P3 TSL 1 (best) BASIC14.2□□□□□ -0.14
Hoxc11P31313 3110082I17Rik-201ENSMUST00000066052 1429 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Hoxc11P31313 Cpne1-203ENSMUST00000109608 3492 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Hoxc11P31313 Hmga1-201ENSMUST00000114888 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Hoxc11P31313 Oser1-202ENSMUST00000104954 1702 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Hoxc11P31313 Gnal-201ENSMUST00000025402 5616 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Hoxc11P31313 Bcs1l-201ENSMUST00000027358 1890 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Hoxc11P31313 Nfe2l1-201ENSMUST00000081775 4654 ntAPPRIS P3 TSL 1 (best) BASIC14.2□□□□□ -0.14
Hoxc11P31313 6530402F18Rik-203ENSMUST00000155949 4301 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Hoxc11P31313 Prkcz-201ENSMUST00000030922 2641 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Hoxc11P31313 Pdzrn3-201ENSMUST00000075994 4104 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Hoxc11P31313 Gm3045-201ENSMUST00000212844 1825 ntAPPRIS P1 TSL 5 BASIC14.2□□□□□ -0.14
Hoxc11P31313 Apol8-201ENSMUST00000070911 1838 ntAPPRIS P2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Hoxc11P31313 Hps1-204ENSMUST00000160455 2952 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Hoxc11P31313 Idh3b-201ENSMUST00000028892 1616 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Hoxc11P31313 Rbm7-202ENSMUST00000213276 2629 ntTSL 2 BASIC14.19□□□□□ -0.14
Hoxc11P31313 Foxo4-201ENSMUST00000062000 3162 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Hoxc11P31313 Tulp2-205ENSMUST00000107762 1883 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Hoxc11P31313 Trim63-201ENSMUST00000030638 1855 ntAPPRIS ALT2 TSL 5 BASIC14.19□□□□□ -0.14
Hoxc11P31313 Slc39a13-202ENSMUST00000079976 1884 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Hoxc11P31313 Trim3-201ENSMUST00000057525 3016 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Hoxc11P31313 Fam189b-202ENSMUST00000117278 2593 ntTSL 5 BASIC14.19□□□□□ -0.14
Hoxc11P31313 Slc6a11-201ENSMUST00000032451 4132 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Hoxc11P31313 Ltc4s-202ENSMUST00000102772 649 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Hoxc11P31313 Gm7336-201ENSMUST00000107041 1232 ntBASIC14.19□□□□□ -0.14
Hoxc11P31313 Gm13306-202ENSMUST00000108018 542 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Hoxc11P31313 Zfp125-202ENSMUST00000144811 704 ntTSL 5 BASIC14.19□□□□□ -0.14
Hoxc11P31313 Fam163b-201ENSMUST00000151224 2959 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Hoxc11P31313 Hsf4-207ENSMUST00000174837 1251 ntTSL 5 BASIC14.19□□□□□ -0.14
Hoxc11P31313 Zfp787-205ENSMUST00000207957 880 ntTSL 5 BASIC14.19□□□□□ -0.14
Hoxc11P31313 Pomc-201ENSMUST00000020990 1031 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Hoxc11P31313 Gm33785-201ENSMUST00000222961 886 ntTSL 5 BASIC14.19□□□□□ -0.14
Hoxc11P31313 Urgcp-201ENSMUST00000053427 5527 ntAPPRIS ALT2 TSL 5 BASIC14.19□□□□□ -0.14
Hoxc11P31313 Apol7d-201ENSMUST00000097699 826 ntTSL 2 BASIC14.19□□□□□ -0.14
Hoxc11P31313 Hnf4a-202ENSMUST00000109411 4362 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Hoxc11P31313 Nedd4l-202ENSMUST00000163516 8163 ntAPPRIS P1 TSL 5 BASIC14.19□□□□□ -0.14
Hoxc11P31313 Ssfa2-202ENSMUST00000111785 5168 ntAPPRIS P2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Hoxc11P31313 Tub-202ENSMUST00000119474 2097 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Hoxc11P31313 Sacm1l-201ENSMUST00000026270 3558 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Hoxc11P31313 Tex264-201ENSMUST00000046735 1391 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Hoxc11P31313 CN725425-202ENSMUST00000190436 2041 ntAPPRIS P5 TSL 5 BASIC14.19□□□□□ -0.14
Hoxc11P31313 Spon2-201ENSMUST00000046186 2045 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Hoxc11P31313 Phactr3-203ENSMUST00000108915 2694 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Hoxc11P31313 Phactr3-204ENSMUST00000108916 2656 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Hoxc11P31313 Tgif2-202ENSMUST00000081335 2900 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Hoxc11P31313 Fbxo8-202ENSMUST00000110322 1709 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Hoxc11P31313 Dusp13-201ENSMUST00000075040 1745 ntAPPRIS P2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Hoxc11P31313 Retreg3-201ENSMUST00000017946 3165 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Hoxc11P31313 Gm8096-201ENSMUST00000209921 1591 ntBASIC14.18□□□□□ -0.14
Hoxc11P31313 Igsf8-204ENSMUST00000139528 2866 ntTSL 2 BASIC14.18□□□□□ -0.14
Hoxc11P31313 2810408A11Rik-202ENSMUST00000100969 1437 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Hoxc11P31313 Mtfp1-201ENSMUST00000004868 1411 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Hoxc11P31313 Mageh1-201ENSMUST00000051484 1410 ntAPPRIS P1 BASIC14.18□□□□□ -0.14
Hoxc11P31313 Cmtm1-202ENSMUST00000160596 1900 ntAPPRIS ALT2 TSL 5 BASIC14.18□□□□□ -0.14
Hoxc11P31313 Six3os1-212ENSMUST00000177220 5601 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Hoxc11P31313 CT030684.3-201ENSMUST00000227308 2445 ntBASIC14.18□□□□□ -0.14
Hoxc11P31313 Fam53b-204ENSMUST00000106165 1232 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Hoxc11P31313 Gm15593-201ENSMUST00000122085 1008 ntBASIC14.18□□□□□ -0.14
Hoxc11P31313 Dph3-205ENSMUST00000124303 809 ntTSL 2 BASIC14.18□□□□□ -0.14
Hoxc11P31313 Gm17613-201ENSMUST00000138893 669 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Hoxc11P31313 Zfp511-201ENSMUST00000168194 1076 ntAPPRIS P1 TSL 2 BASIC14.18□□□□□ -0.14
Hoxc11P31313 Rtl8c-201ENSMUST00000063384 401 ntAPPRIS P1 BASIC14.18□□□□□ -0.14
Hoxc11P31313 Eif4g3-205ENSMUST00000105831 6235 ntAPPRIS ALT2 TSL 5 BASIC14.18□□□□□ -0.14
Hoxc11P31313 Gtf3c4-204ENSMUST00000171404 7127 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Hoxc11P31313 Ntrk2-209ENSMUST00000225950 2640 ntBASIC14.18□□□□□ -0.14
Hoxc11P31313 Ripor2-201ENSMUST00000038477 3371 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Hoxc11P31313 Pcdha9-201ENSMUST00000115659 5341 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Hoxc11P31313 Picalm-206ENSMUST00000207484 8209 ntAPPRIS P3 TSL 1 (best) BASIC14.18□□□□□ -0.14
Hoxc11P31313 Col9a2-201ENSMUST00000030372 2924 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Hoxc11P31313 Uxs1-202ENSMUST00000126008 4620 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Hoxc11P31313 Gm26850-201ENSMUST00000181653 2669 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Hoxc11P31313 Tmem56-203ENSMUST00000128909 6696 ntAPPRIS P2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Hoxc11P31313 Nos1ap-202ENSMUST00000160456 3022 ntAPPRIS P2 TSL 5 BASIC14.17□□□□□ -0.14
Hoxc11P31313 Gm21451-201ENSMUST00000111062 2775 ntBASIC14.17□□□□□ -0.14
Hoxc11P31313 Ppp1r1a-201ENSMUST00000023133 1306 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Hoxc11P31313 Ablim1-209ENSMUST00000111546 2267 ntAPPRIS ALT2 TSL 5 BASIC14.17□□□□□ -0.14
Hoxc11P31313 D1Pas1-201ENSMUST00000045108 3212 ntAPPRIS P1 BASIC14.17□□□□□ -0.14
Hoxc11P31313 Siglecf-203ENSMUST00000122423 2607 ntAPPRIS P3 TSL 1 (best) BASIC14.17□□□□□ -0.14
Hoxc11P31313 3110082I17Rik-204ENSMUST00000198474 2030 ntTSL 2 BASIC14.17□□□□□ -0.14
Hoxc11P31313 Gm13233-201ENSMUST00000118760 1443 ntBASIC14.17□□□□□ -0.14
Hoxc11P31313 Gm13244-201ENSMUST00000118855 1446 ntBASIC14.17□□□□□ -0.14
Hoxc11P31313 Gm37297-201ENSMUST00000192974 2384 ntBASIC14.17□□□□□ -0.14
Hoxc11P31313 Sash1-201ENSMUST00000015449 7183 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Hoxc11P31313 Tacc3-201ENSMUST00000074849 2669 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Hoxc11P31313 Sigirr-201ENSMUST00000097958 1990 ntAPPRIS P2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Retrieved 100 of 76,532 protein–RNA pairs in 53.9 ms