Protein–RNA interactions for Protein: P25118

Tnfrsf1a, Tumor necrosis factor receptor superfamily member 1A, mousemouse

Predictions only

Length 454 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tnfrsf1aP25118 Adgrb2-206ENSMUST00000106018 4470 ntAPPRIS ALT2 TSL 5 BASIC12.27□□□□□ -0.44
Tnfrsf1aP25118 Nrp2-204ENSMUST00000102822 6708 ntAPPRIS ALT2 TSL 1 (best) BASIC12.27□□□□□ -0.44
Tnfrsf1aP25118 9130024F11Rik-202ENSMUST00000185204 2628 ntTSL 1 (best) BASIC12.27□□□□□ -0.44
Tnfrsf1aP25118 Rad51-201ENSMUST00000028795 3368 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
Tnfrsf1aP25118 AI849053-201ENSMUST00000181021 2658 ntTSL 3 BASIC12.27□□□□□ -0.44
Tnfrsf1aP25118 Pex5-201ENSMUST00000035861 3139 ntAPPRIS P4 TSL 1 (best) BASIC12.27□□□□□ -0.44
Tnfrsf1aP25118 Lrriq4-202ENSMUST00000108267 2387 ntAPPRIS P3 TSL 1 (best) BASIC12.27□□□□□ -0.44
Tnfrsf1aP25118 Tinf2-205ENSMUST00000227842 2001 ntAPPRIS ALT2 BASIC12.27□□□□□ -0.44
Tnfrsf1aP25118 Aph1a-202ENSMUST00000056710 1601 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
Tnfrsf1aP25118 Tpm1-209ENSMUST00000113690 2890 ntTSL 3 BASIC12.27□□□□□ -0.45
Tnfrsf1aP25118 2610507B11Rik-201ENSMUST00000010421 7443 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Tnfrsf1aP25118 Tcf3-208ENSMUST00000105344 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC12.27□□□□□ -0.45
Tnfrsf1aP25118 Abi2-206ENSMUST00000188594 1658 ntTSL 5 BASIC12.27□□□□□ -0.45
Tnfrsf1aP25118 Rpl13-ps5-201ENSMUST00000117813 630 ntBASIC12.27□□□□□ -0.45
Tnfrsf1aP25118 Tpt1-ps6-201ENSMUST00000121768 523 ntBASIC12.27□□□□□ -0.45
Tnfrsf1aP25118 1810062O18Rik-203ENSMUST00000129237 647 ntTSL 5 BASIC12.27□□□□□ -0.45
Tnfrsf1aP25118 Snhg15-203ENSMUST00000134527 675 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Tnfrsf1aP25118 Lgals3-204ENSMUST00000150290 1298 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Tnfrsf1aP25118 Egfl8-201ENSMUST00000015611 1150 ntAPPRIS P2 TSL 1 (best) BASIC12.27□□□□□ -0.45
Tnfrsf1aP25118 Rpl19-ps10-201ENSMUST00000205555 330 ntBASIC12.27□□□□□ -0.45
Tnfrsf1aP25118 Cela3a-201ENSMUST00000024200 958 ntAPPRIS P1 TSL 5 BASIC12.27□□□□□ -0.45
Tnfrsf1aP25118 Olfr30-201ENSMUST00000055204 1066 ntAPPRIS P1 BASIC12.27□□□□□ -0.45
Tnfrsf1aP25118 Ythdf2-201ENSMUST00000085181 955 ntTSL 2 BASIC12.27□□□□□ -0.45
Tnfrsf1aP25118 Egfl8-202ENSMUST00000097345 1064 ntAPPRIS ALT2 TSL 1 (best) BASIC12.27□□□□□ -0.45
Tnfrsf1aP25118 Ablim2-205ENSMUST00000114205 2579 ntAPPRIS ALT2 TSL 5 BASIC12.27□□□□□ -0.45
Tnfrsf1aP25118 Acly-202ENSMUST00000107385 1741 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Tnfrsf1aP25118 Tbk1-201ENSMUST00000020316 3024 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Tnfrsf1aP25118 Dsn1-202ENSMUST00000103130 2636 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Tnfrsf1aP25118 Lrrc41-201ENSMUST00000030471 3065 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Tnfrsf1aP25118 Nrxn1-207ENSMUST00000160844 9309 ntAPPRIS P2 TSL 1 (best) BASIC12.27□□□□□ -0.45
Tnfrsf1aP25118 Disp1-205ENSMUST00000195372 4901 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Tnfrsf1aP25118 Plod2-203ENSMUST00000160359 3663 ntAPPRIS ALT2 TSL 1 (best) BASIC12.27□□□□□ -0.45
Tnfrsf1aP25118 Cyp1b1-201ENSMUST00000024894 5128 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Tnfrsf1aP25118 B230217C12Rik-203ENSMUST00000164364 1859 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Tnfrsf1aP25118 Trp53-206ENSMUST00000171247 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC12.27□□□□□ -0.45
Tnfrsf1aP25118 Dnajc28-201ENSMUST00000049244 1891 ntAPPRIS ALT2 TSL 1 (best) BASIC12.27□□□□□ -0.45
Tnfrsf1aP25118 Ttc13-210ENSMUST00000214828 3301 ntAPPRIS P1 TSL 5 BASIC12.27□□□□□ -0.45
Tnfrsf1aP25118 Ushbp1-201ENSMUST00000049184 2438 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Tnfrsf1aP25118 Nupl2-201ENSMUST00000049887 2914 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Tnfrsf1aP25118 Gm12620-201ENSMUST00000119791 1986 ntBASIC12.27□□□□□ -0.45
Tnfrsf1aP25118 Gm12612-201ENSMUST00000140182 1986 ntBASIC12.27□□□□□ -0.45
Tnfrsf1aP25118 Slc33a1-202ENSMUST00000160883 1978 ntAPPRIS P1 TSL 5 BASIC12.27□□□□□ -0.45
Tnfrsf1aP25118 Gm3373-202ENSMUST00000177556 1955 ntAPPRIS P5 TSL 5 BASIC12.27□□□□□ -0.45
Tnfrsf1aP25118 Gm3500-201ENSMUST00000177986 1955 ntAPPRIS P1 TSL 5 BASIC12.27□□□□□ -0.45
Tnfrsf1aP25118 Adal-201ENSMUST00000028702 2471 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Tnfrsf1aP25118 Adora2a-201ENSMUST00000105420 2596 ntAPPRIS P1 TSL 3 BASIC12.26□□□□□ -0.45
Tnfrsf1aP25118 Carlr-201ENSMUST00000181515 2574 ntBASIC12.26□□□□□ -0.45
Tnfrsf1aP25118 Gm8237-201ENSMUST00000164484 2051 ntAPPRIS P5 TSL 5 BASIC12.26□□□□□ -0.45
Tnfrsf1aP25118 Prmt5-201ENSMUST00000023873 2691 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Tnfrsf1aP25118 Asxl1-201ENSMUST00000109790 6968 ntAPPRIS P2 TSL 5 BASIC12.26□□□□□ -0.45
Tnfrsf1aP25118 Srsf1-205ENSMUST00000139129 5362 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Tnfrsf1aP25118 Spcs2-210ENSMUST00000209032 1610 ntTSL 5 BASIC12.26□□□□□ -0.45
Tnfrsf1aP25118 Ptpn6-203ENSMUST00000171549 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC12.26□□□□□ -0.45
Tnfrsf1aP25118 Cpsf6-206ENSMUST00000176670 2227 ntTSL 5 BASIC12.26□□□□□ -0.45
Tnfrsf1aP25118 Bst1-201ENSMUST00000101237 2856 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Tnfrsf1aP25118 Mark2-209ENSMUST00000165965 2874 ntAPPRIS P4 TSL 1 (best) BASIC12.26□□□□□ -0.45
Tnfrsf1aP25118 Eloa-201ENSMUST00000030427 4708 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Tnfrsf1aP25118 Pcdhga8-201ENSMUST00000066149 4730 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Tnfrsf1aP25118 Dffa-202ENSMUST00000103216 1835 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Tnfrsf1aP25118 Tle1-204ENSMUST00000102848 3660 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Tnfrsf1aP25118 Timp2-201ENSMUST00000017610 3709 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Tnfrsf1aP25118 Dnajc2-202ENSMUST00000115192 1132 ntTSL 2 BASIC12.26□□□□□ -0.45
Tnfrsf1aP25118 4930570G19Rik-204ENSMUST00000149387 986 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Tnfrsf1aP25118 H2-T-ps-201ENSMUST00000172538 1067 ntBASIC12.26□□□□□ -0.45
Tnfrsf1aP25118 1700039E22Rik-201ENSMUST00000174082 770 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Tnfrsf1aP25118 Mir5126-201ENSMUST00000175513 77 ntBASIC12.26□□□□□ -0.45
Tnfrsf1aP25118 Erdr1-202ENSMUST00000177671 708 ntAPPRIS ALT2 TSL 5 BASIC12.26□□□□□ -0.45
Tnfrsf1aP25118 Gm29202-201ENSMUST00000191263 422 ntTSL 5 BASIC12.26□□□□□ -0.45
Tnfrsf1aP25118 Gm9449-201ENSMUST00000207265 1011 ntBASIC12.26□□□□□ -0.45
Tnfrsf1aP25118 Vmn2r-ps89-201ENSMUST00000209195 1010 ntBASIC12.26□□□□□ -0.45
Tnfrsf1aP25118 Bex3-201ENSMUST00000053540 930 ntAPPRIS P3 TSL 1 (best) BASIC12.26□□□□□ -0.45
Tnfrsf1aP25118 Vps26a-202ENSMUST00000105447 2597 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Tnfrsf1aP25118 Otud6b-201ENSMUST00000117268 3266 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Tnfrsf1aP25118 Gm13294-201ENSMUST00000121757 1330 ntBASIC12.26□□□□□ -0.45
Tnfrsf1aP25118 Cc2d1b-201ENSMUST00000030320 3303 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Tnfrsf1aP25118 Gli1-201ENSMUST00000026474 4057 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Tnfrsf1aP25118 Cacna2d1-202ENSMUST00000078272 7311 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Tnfrsf1aP25118 Zfp639-205ENSMUST00000193287 2211 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Tnfrsf1aP25118 Galnt14-201ENSMUST00000024858 2990 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Tnfrsf1aP25118 Hpcal1-201ENSMUST00000071858 1526 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Tnfrsf1aP25118 Adcyap1r1-202ENSMUST00000070756 6107 ntAPPRIS ALT2 TSL 1 (best) BASIC12.26□□□□□ -0.45
Tnfrsf1aP25118 Ppp2r5e-205ENSMUST00000220035 3135 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Tnfrsf1aP25118 Kat8-201ENSMUST00000033070 1579 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Tnfrsf1aP25118 Pygo2-201ENSMUST00000060061 3198 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Tnfrsf1aP25118 Pou2f3-202ENSMUST00000176636 2522 ntAPPRIS P2 TSL 1 (best) BASIC12.26□□□□□ -0.45
Tnfrsf1aP25118 Gm43509-201ENSMUST00000196551 2594 ntBASIC12.25□□□□□ -0.45
Tnfrsf1aP25118 Mtdh-201ENSMUST00000022865 6919 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Tnfrsf1aP25118 Cit-203ENSMUST00000112008 6087 ntAPPRIS ALT2 TSL 5 BASIC12.25□□□□□ -0.45
Tnfrsf1aP25118 Rgs6-216ENSMUST00000200911 2626 ntAPPRIS ALT2 TSL 1 (best) BASIC12.25□□□□□ -0.45
Tnfrsf1aP25118 Tmem164-202ENSMUST00000101198 4443 ntTSL 3 BASIC12.25□□□□□ -0.45
Tnfrsf1aP25118 Gng2-204ENSMUST00000160013 3826 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Tnfrsf1aP25118 Snx8-205ENSMUST00000196566 1914 ntAPPRIS ALT2 TSL 5 BASIC12.25□□□□□ -0.45
Tnfrsf1aP25118 Tor1aip1-201ENSMUST00000027738 1952 ntAPPRIS P3 TSL 1 (best) BASIC12.25□□□□□ -0.45
Tnfrsf1aP25118 Mospd2-201ENSMUST00000004715 2015 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Tnfrsf1aP25118 Ubxn11-201ENSMUST00000070246 2014 ntAPPRIS ALT2 TSL 5 BASIC12.25□□□□□ -0.45
Tnfrsf1aP25118 Lmntd2-202ENSMUST00000170841 2077 ntAPPRIS ALT2 TSL 1 (best) BASIC12.25□□□□□ -0.45
Tnfrsf1aP25118 Drd5-201ENSMUST00000041646 3152 ntAPPRIS P1 BASIC12.25□□□□□ -0.45
Tnfrsf1aP25118 Mdga1-201ENSMUST00000073556 7566 ntAPPRIS P2 TSL 5 BASIC12.25□□□□□ -0.45
Tnfrsf1aP25118 Gm29208-203ENSMUST00000213687 2219 ntTSL 5 BASIC12.25□□□□□ -0.45
Tnfrsf1aP25118 Pard6b-201ENSMUST00000052125 3399 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Retrieved 100 of 76,532 protein–RNA pairs in 36.4 ms