Protein–RNA interactions for Protein: P22518

Clk1, Dual specificity protein kinase CLK1, mousemouse

Predictions only

Length 483 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clk1P22518 Gm29361-201ENSMUST00000183323 2000 ntBASIC13.66□□□□□ -0.22
Clk1P22518 Dmkn-202ENSMUST00000054427 2034 ntAPPRIS ALT2 TSL 5 BASIC13.66□□□□□ -0.22
Clk1P22518 Tmem28-201ENSMUST00000096363 3909 ntAPPRIS P1 TSL 5 BASIC13.66□□□□□ -0.22
Clk1P22518 Ctps-201ENSMUST00000030381 2705 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Clk1P22518 E230016M11Rik-201ENSMUST00000130657 1764 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Clk1P22518 Brpf1-210ENSMUST00000204626 4381 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Clk1P22518 Abraxas1-202ENSMUST00000055245 2139 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Clk1P22518 6430710C18Rik-203ENSMUST00000136807 1540 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Clk1P22518 Map6-204ENSMUST00000127492 4920 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Clk1P22518 Dnaja1-210ENSMUST00000164233 5622 ntAPPRIS P1 TSL 5 BASIC13.66□□□□□ -0.22
Clk1P22518 Npr3-201ENSMUST00000066529 6892 ntAPPRIS P2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Clk1P22518 Ano10-201ENSMUST00000042546 2653 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Clk1P22518 Slc25a19-201ENSMUST00000021089 2307 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Clk1P22518 Josd2-202ENSMUST00000117324 858 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Clk1P22518 Gemin7-204ENSMUST00000122055 609 ntAPPRIS P1 TSL 3 BASIC13.66□□□□□ -0.22
Clk1P22518 Gm28577-201ENSMUST00000176106 741 ntTSL 5 BASIC13.66□□□□□ -0.22
Clk1P22518 Timm13-204ENSMUST00000219896 542 ntTSL 3 BASIC13.66□□□□□ -0.22
Clk1P22518 Psmb5-202ENSMUST00000227257 622 ntBASIC13.66□□□□□ -0.22
Clk1P22518 Cmtm8-201ENSMUST00000047013 1064 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Clk1P22518 2010003K11Rik-201ENSMUST00000048482 1165 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Clk1P22518 Idnk-201ENSMUST00000051490 764 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Clk1P22518 Edem3-204ENSMUST00000191070 3127 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Clk1P22518 Scn4b-201ENSMUST00000060125 4982 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Clk1P22518 Mybl1-201ENSMUST00000088658 4980 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Clk1P22518 Grk6-207ENSMUST00000225925 2769 ntBASIC13.66□□□□□ -0.22
Clk1P22518 Gm12500-202ENSMUST00000186471 2428 ntBASIC13.66□□□□□ -0.22
Clk1P22518 Gm42416-201ENSMUST00000115661 2856 ntAPPRIS P1 TSL 2 BASIC13.66□□□□□ -0.22
Clk1P22518 Tsku-202ENSMUST00000164726 2620 ntAPPRIS P1 TSL 2 BASIC13.66□□□□□ -0.22
Clk1P22518 Tspan32-204ENSMUST00000105923 1499 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Clk1P22518 Bhlhb9-204ENSMUST00000180025 2812 ntAPPRIS P1 TSL 2 BASIC13.66□□□□□ -0.22
Clk1P22518 Gnb2-212ENSMUST00000150063 1569 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Clk1P22518 Pald1-201ENSMUST00000020289 4282 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Clk1P22518 Iws1-206ENSMUST00000212675 2936 ntAPPRIS ALT2 TSL 5 BASIC13.66□□□□□ -0.22
Clk1P22518 Tex10-201ENSMUST00000030030 3102 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Clk1P22518 Tmem184c-201ENSMUST00000034030 2678 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Clk1P22518 Lrp11-203ENSMUST00000130590 3220 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Clk1P22518 Pcdh7-203ENSMUST00000191837 8785 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Clk1P22518 Fam13b-201ENSMUST00000040506 3343 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Clk1P22518 Pigh-201ENSMUST00000072154 2339 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Clk1P22518 Hps5-201ENSMUST00000014562 4953 ntAPPRIS P3 TSL 1 (best) BASIC13.65□□□□□ -0.22
Clk1P22518 Arfip1-203ENSMUST00000143514 1343 ntAPPRIS P1 TSL 5 BASIC13.65□□□□□ -0.22
Clk1P22518 Pqlc1-204ENSMUST00000129043 1864 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
Clk1P22518 N6amt1-202ENSMUST00000118115 1951 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Clk1P22518 Ablim2-209ENSMUST00000129347 1995 ntAPPRIS ALT2 TSL 5 BASIC13.65□□□□□ -0.22
Clk1P22518 1010001N08Rik-201ENSMUST00000180789 1967 ntTSL 2 BASIC13.65□□□□□ -0.22
Clk1P22518 Ppp2r5c-204ENSMUST00000221074 1971 ntTSL 5 BASIC13.65□□□□□ -0.22
Clk1P22518 Acbd5-208ENSMUST00000226571 3802 ntAPPRIS ALT2 BASIC13.65□□□□□ -0.22
Clk1P22518 Mgat1-202ENSMUST00000101293 2729 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Clk1P22518 Sphk1-211ENSMUST00000141798 1532 ntAPPRIS P4 TSL 1 (best) BASIC13.65□□□□□ -0.22
Clk1P22518 Sirt5-206ENSMUST00000221481 1548 ntTSL 5 BASIC13.65□□□□□ -0.22
Clk1P22518 Ppef2-201ENSMUST00000031359 2274 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Clk1P22518 Irgc1-201ENSMUST00000080594 1737 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Clk1P22518 Add1-203ENSMUST00000114335 4547 ntTSL 5 BASIC13.65□□□□□ -0.22
Clk1P22518 Matn2-206ENSMUST00000228570 2798 ntBASIC13.65□□□□□ -0.22
Clk1P22518 Gm14140-201ENSMUST00000119999 995 ntBASIC13.65□□□□□ -0.22
Clk1P22518 Gm1401-201ENSMUST00000122048 772 ntBASIC13.65□□□□□ -0.22
Clk1P22518 0610025J13Rik-201ENSMUST00000131324 652 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Clk1P22518 Prr3-202ENSMUST00000165613 767 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Clk1P22518 Gm3764-206ENSMUST00000181356 1088 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Clk1P22518 Rps2-ps5-201ENSMUST00000184266 849 ntBASIC13.65□□□□□ -0.22
Clk1P22518 1700021A07Rik-203ENSMUST00000188024 404 ntTSL 3 BASIC13.65□□□□□ -0.22
Clk1P22518 1700017L05Rik-201ENSMUST00000201654 558 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Clk1P22518 5033428I22Rik-203ENSMUST00000210614 952 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Clk1P22518 Timm9-205ENSMUST00000221178 529 ntTSL 3 BASIC13.65□□□□□ -0.22
Clk1P22518 D930028M14Rik-201ENSMUST00000098678 1003 ntTSL 2 BASIC13.65□□□□□ -0.22
Clk1P22518 Dnm1-205ENSMUST00000113365 3257 ntAPPRIS ALT1 TSL 5 BASIC13.65□□□□□ -0.22
Clk1P22518 Gm4755-201ENSMUST00000181803 2647 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Clk1P22518 Csnk2a2-201ENSMUST00000056919 3773 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Clk1P22518 Fam169b-206ENSMUST00000210558 2815 ntAPPRIS ALT2 TSL 5 BASIC13.65□□□□□ -0.22
Clk1P22518 Cdk19-202ENSMUST00000095743 3973 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Clk1P22518 Hykk-201ENSMUST00000039742 5110 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Clk1P22518 Rfx1-204ENSMUST00000211046 3677 ntAPPRIS ALT2 TSL 5 BASIC13.65□□□□□ -0.23
Clk1P22518 Slc39a3-202ENSMUST00000117276 3796 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.23
Clk1P22518 Ndufab1-203ENSMUST00000123296 1416 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Clk1P22518 Spatc1-201ENSMUST00000074173 1605 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Clk1P22518 Rnf122-205ENSMUST00000217278 1726 ntAPPRIS ALT1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Clk1P22518 Fbxl8-201ENSMUST00000036221 1901 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Clk1P22518 Arhgap26-201ENSMUST00000097593 7898 ntAPPRIS P2 TSL 5 BASIC13.64□□□□□ -0.23
Clk1P22518 Mzf1-204ENSMUST00000182490 2872 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
Clk1P22518 Gm26777-201ENSMUST00000181852 2573 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Clk1P22518 Gatm-201ENSMUST00000028624 2389 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Clk1P22518 Col1a1-201ENSMUST00000001547 5930 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Clk1P22518 Nr1i3-203ENSMUST00000111328 1359 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
Clk1P22518 Slc39a1-ps-201ENSMUST00000120862 969 ntBASIC13.64□□□□□ -0.23
Clk1P22518 Rpl36-ps8-201ENSMUST00000121187 315 ntBASIC13.64□□□□□ -0.23
Clk1P22518 Kctd14-202ENSMUST00000121987 1210 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Clk1P22518 Mcub-204ENSMUST00000153506 1005 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Clk1P22518 Tmprss5-204ENSMUST00000167095 1146 ntAPPRIS ALT2 TSL 5 BASIC13.64□□□□□ -0.23
Clk1P22518 Gm27300-201ENSMUST00000184085 97 ntBASIC13.64□□□□□ -0.23
Clk1P22518 Gm27335-201ENSMUST00000184758 97 ntBASIC13.64□□□□□ -0.23
Clk1P22518 Samd13-205ENSMUST00000197989 591 ntTSL 5 BASIC13.64□□□□□ -0.23
Clk1P22518 AC155714.1-201ENSMUST00000214033 956 ntTSL 5 BASIC13.64□□□□□ -0.23
Clk1P22518 AC154222.1-201ENSMUST00000223882 475 ntBASIC13.64□□□□□ -0.23
Clk1P22518 Fam26f-201ENSMUST00000062784 1094 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Clk1P22518 Prss23-201ENSMUST00000041761 3228 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Clk1P22518 Rnf4-207ENSMUST00000182709 3046 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Clk1P22518 Zyx-207ENSMUST00000203652 2605 ntAPPRIS P3 TSL 1 (best) BASIC13.64□□□□□ -0.23
Clk1P22518 Fubp1-206ENSMUST00000196739 2526 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
Clk1P22518 Gnat1-201ENSMUST00000010205 2328 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Clk1P22518 BC037039-201ENSMUST00000192003 2205 ntBASIC13.64□□□□□ -0.23
Retrieved 100 of 76,532 protein–RNA pairs in 40.9 ms