Protein–RNA interactions for Protein: P15975

Usp53, Inactive ubiquitin carboxyl-terminal hydrolase 53, mousemouse

Predictions only

Length 1,069 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp53P15975 Gm20910-201ENSMUST00000193268 696 ntBASIC16.92■□□□□ 0.3
Usp53P15975 Gm21871-201ENSMUST00000194621 696 ntBASIC16.92■□□□□ 0.3
Usp53P15975 Rpl32-202ENSMUST00000203816 906 ntAPPRIS P1 TSL 2 BASIC16.92■□□□□ 0.3
Usp53P15975 Gprin1-201ENSMUST00000099506 4141 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Usp53P15975 Tmtc2-201ENSMUST00000061506 5629 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Usp53P15975 Tfdp2-201ENSMUST00000034982 7354 ntAPPRIS P3 TSL 1 (best) BASIC16.92■□□□□ 0.3
Usp53P15975 Dclk1-211ENSMUST00000199169 1499 ntTSL 2 BASIC16.92■□□□□ 0.3
Usp53P15975 6030408B16Rik-202ENSMUST00000191426 1947 ntAPPRIS P5 TSL 1 (best) BASIC16.92■□□□□ 0.3
Usp53P15975 Ehd4-201ENSMUST00000028755 3730 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Usp53P15975 Tigd5-201ENSMUST00000192937 4801 ntAPPRIS P1 BASIC16.91■□□□□ 0.3
Usp53P15975 Slc8b1-201ENSMUST00000068326 2898 ntAPPRIS P2 TSL 1 (best) BASIC16.91■□□□□ 0.3
Usp53P15975 Nectin2-201ENSMUST00000075447 2735 ntAPPRIS P3 TSL 1 (best) BASIC16.91■□□□□ 0.3
Usp53P15975 Hars-201ENSMUST00000001416 1987 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Usp53P15975 Pdia2-202ENSMUST00000120333 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
Usp53P15975 Dbndd1-201ENSMUST00000176155 1677 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Usp53P15975 Ywhaq-201ENSMUST00000049531 1515 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Usp53P15975 Dnajc27-202ENSMUST00000049584 2934 ntAPPRIS P1 TSL 2 BASIC16.91■□□□□ 0.3
Usp53P15975 Zkscan3-203ENSMUST00000116434 2600 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Usp53P15975 Zfp90-201ENSMUST00000034382 2632 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Usp53P15975 Strn-203ENSMUST00000145910 8629 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Usp53P15975 Mid2-202ENSMUST00000112990 6271 ntAPPRIS P1 TSL 5 BASIC16.91■□□□□ 0.3
Usp53P15975 Larp1b-205ENSMUST00000191805 1581 ntAPPRIS P2 TSL 5 BASIC16.91■□□□□ 0.3
Usp53P15975 Ahcy-201ENSMUST00000054607 2543 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Usp53P15975 Gm14057-201ENSMUST00000120631 482 ntBASIC16.91■□□□□ 0.3
Usp53P15975 Arid2-202ENSMUST00000134985 809 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Usp53P15975 Pkig-209ENSMUST00000164399 983 ntAPPRIS P1 TSL 2 BASIC16.91■□□□□ 0.3
Usp53P15975 Mrpl27-201ENSMUST00000025278 756 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Usp53P15975 Mrpl4-201ENSMUST00000003386 1288 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Usp53P15975 Gstp2-201ENSMUST00000042700 770 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Usp53P15975 Apobec2-201ENSMUST00000046549 1218 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Usp53P15975 Gm11937-201ENSMUST00000076478 396 ntAPPRIS P1 BASIC16.91■□□□□ 0.3
Usp53P15975 Ebf4-202ENSMUST00000110287 2580 ntAPPRIS ALT2 TSL 5 BASIC16.91■□□□□ 0.3
Usp53P15975 Fbxl19-207ENSMUST00000206893 3449 ntAPPRIS ALT2 TSL 5 BASIC16.91■□□□□ 0.3
Usp53P15975 Rxra-202ENSMUST00000100251 1952 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Usp53P15975 Zscan22-204ENSMUST00000120809 1826 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Usp53P15975 Tarsl2-201ENSMUST00000032728 3192 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Usp53P15975 Traf7-210ENSMUST00000176353 2503 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Usp53P15975 Nbea-201ENSMUST00000029374 10986 ntAPPRIS P1 TSL 5 BASIC16.91■□□□□ 0.3
Usp53P15975 Zmym3-208ENSMUST00000121429 1890 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
Usp53P15975 Usp51-201ENSMUST00000095755 2204 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Usp53P15975 Pbk-201ENSMUST00000022612 1720 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Usp53P15975 Fgfr1op-202ENSMUST00000097419 3505 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
Usp53P15975 Adal-201ENSMUST00000028702 2471 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
Usp53P15975 Trp53rkb-203ENSMUST00000151826 4426 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Usp53P15975 Strap-201ENSMUST00000064910 2650 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Usp53P15975 Irs3-201ENSMUST00000057314 2337 ntAPPRIS P2 TSL 1 (best) BASIC16.9■□□□□ 0.3
Usp53P15975 Gm13425-201ENSMUST00000145389 5391 ntTSL 3 BASIC16.9■□□□□ 0.3
Usp53P15975 Smox-208ENSMUST00000110188 1991 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
Usp53P15975 Gm45470-202ENSMUST00000210817 2192 ntTSL 5 BASIC16.9■□□□□ 0.3
Usp53P15975 Ppdpf-202ENSMUST00000108841 689 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Usp53P15975 Mmab-202ENSMUST00000112245 644 ntTSL 3 BASIC16.9■□□□□ 0.3
Usp53P15975 Gm5566-201ENSMUST00000116118 459 ntBASIC16.9■□□□□ 0.3
Usp53P15975 Hist3h2bb-ps-201ENSMUST00000117558 465 ntBASIC16.9■□□□□ 0.3
Usp53P15975 Chchd7-208ENSMUST00000121651 620 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Usp53P15975 Pam16-201ENSMUST00000014445 596 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Usp53P15975 Gm9719-201ENSMUST00000162765 543 ntBASIC16.9■□□□□ 0.3
Usp53P15975 Gm20661-203ENSMUST00000177368 900 ntAPPRIS P1 TSL 2 BASIC16.9■□□□□ 0.3
Usp53P15975 Gm27533-201ENSMUST00000183800 152 ntBASIC16.9■□□□□ 0.3
Usp53P15975 Timm13-201ENSMUST00000020440 1225 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Usp53P15975 Gm10747-201ENSMUST00000217799 1014 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
Usp53P15975 Smdt1-201ENSMUST00000023086 705 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Usp53P15975 Chchd7-201ENSMUST00000041122 672 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Usp53P15975 Hes5-201ENSMUST00000049621 1273 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Usp53P15975 Ifng-201ENSMUST00000068592 1208 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Usp53P15975 Pds5b-208ENSMUST00000202170 6598 ntAPPRIS ALT2 TSL 5 BASIC16.9■□□□□ 0.3
Usp53P15975 Znfx1-201ENSMUST00000048988 7218 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Usp53P15975 Tesk2-203ENSMUST00000106459 2444 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
Usp53P15975 Arhgap44-203ENSMUST00000093002 3982 ntAPPRIS ALT2 TSL 5 BASIC16.9■□□□□ 0.3
Usp53P15975 Aldh1b1-201ENSMUST00000044384 2298 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Usp53P15975 Disp2-202ENSMUST00000063975 1505 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
Usp53P15975 Gm26534-201ENSMUST00000181687 1724 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
Usp53P15975 Skida1-201ENSMUST00000066885 2936 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
Usp53P15975 Slc24a3-201ENSMUST00000081121 1788 ntAPPRIS P2 TSL 5 BASIC16.89■□□□□ 0.3
Usp53P15975 Hdgfl1-201ENSMUST00000055915 1993 ntAPPRIS P1 BASIC16.89■□□□□ 0.3
Usp53P15975 Poli-201ENSMUST00000043286 2591 ntTSL 1 (best) BASIC16.89■□□□□ 0.3
Usp53P15975 Iqcm-201ENSMUST00000034033 2014 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Usp53P15975 Atp11b-201ENSMUST00000029257 4868 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Usp53P15975 Gcsh-201ENSMUST00000040484 1443 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Usp53P15975 Mdm1-202ENSMUST00000163238 2461 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
Usp53P15975 Rufy3-205ENSMUST00000198965 3536 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Usp53P15975 Tmem59l-201ENSMUST00000045286 1491 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Usp53P15975 Gm15701-201ENSMUST00000129559 573 ntTSL 3 BASIC16.89■□□□□ 0.29
Usp53P15975 Igfbp4-204ENSMUST00000140772 742 ntTSL 2 BASIC16.89■□□□□ 0.29
Usp53P15975 Gpx4-207ENSMUST00000183037 735 ntTSL 2 BASIC16.89■□□□□ 0.29
Usp53P15975 AC149588.3-201ENSMUST00000227515 150 ntBASIC16.89■□□□□ 0.29
Usp53P15975 Hrasls5-201ENSMUST00000025929 1063 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Usp53P15975 Dkkl1-201ENSMUST00000033057 1149 ntAPPRIS P2 TSL 1 (best) BASIC16.89■□□□□ 0.29
Usp53P15975 Cmtm5-201ENSMUST00000037814 1095 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Usp53P15975 Ifnl2-201ENSMUST00000081684 702 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Usp53P15975 Kif21a-203ENSMUST00000100304 6439 ntAPPRIS ALT2 TSL 5 BASIC16.89■□□□□ 0.29
Usp53P15975 Kif21a-202ENSMUST00000088614 6439 ntAPPRIS ALT2 TSL 5 BASIC16.89■□□□□ 0.29
Usp53P15975 Pdia2-201ENSMUST00000039113 1721 ntAPPRIS P2 TSL 1 (best) BASIC16.89■□□□□ 0.29
Usp53P15975 Bcat2-202ENSMUST00000120864 1536 ntTSL 5 BASIC16.89■□□□□ 0.29
Usp53P15975 St7l-211ENSMUST00000200132 2636 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
Usp53P15975 Kdm3a-201ENSMUST00000065509 4816 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Usp53P15975 Tbc1d16-203ENSMUST00000207655 2855 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
Usp53P15975 Cpz-201ENSMUST00000038676 2245 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Usp53P15975 Sybu-201ENSMUST00000090057 3230 ntAPPRIS P4 TSL 1 (best) BASIC16.89■□□□□ 0.29
Usp53P15975 Tpm2-202ENSMUST00000107913 2098 ntAPPRIS P3 TSL 1 (best) BASIC16.89■□□□□ 0.29
Usp53P15975 Mapk8-201ENSMUST00000022504 2587 ntAPPRIS P5 TSL 1 (best) BASIC16.88■□□□□ 0.29
Retrieved 100 of 76,532 protein–RNA pairs in 36.6 ms