Protein–RNA interactions for Protein: P12850

Cxcl1, Growth-regulated alpha protein, mousemouse

Predictions only

Length 96 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cxcl1P12850 Trim24-203ENSMUST00000120428 3940 ntAPPRIS ALT2 TSL 1 (best) BASIC12.13□□□□□ -0.47
Cxcl1P12850 Commd7-201ENSMUST00000071852 3210 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Cxcl1P12850 Kcnk10-203ENSMUST00000221305 1357 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Cxcl1P12850 Arhgef25-202ENSMUST00000167353 2189 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Cxcl1P12850 Abl2-201ENSMUST00000027888 3549 ntAPPRIS P3 TSL 1 (best) BASIC12.13□□□□□ -0.47
Cxcl1P12850 Myl12a-206ENSMUST00000148960 1937 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Cxcl1P12850 Spon2-201ENSMUST00000046186 2045 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Cxcl1P12850 Eaf1-201ENSMUST00000022446 4918 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Cxcl1P12850 Zfp574-202ENSMUST00000179556 4140 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Cxcl1P12850 Irf7-203ENSMUST00000106023 2237 ntAPPRIS ALT2 TSL 1 (best) BASIC12.13□□□□□ -0.47
Cxcl1P12850 Mocos-201ENSMUST00000068006 2884 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Cxcl1P12850 Chrm4-201ENSMUST00000045537 1440 ntAPPRIS P1 BASIC12.12□□□□□ -0.47
Cxcl1P12850 Scarf1-202ENSMUST00000118243 2617 ntAPPRIS ALT2 TSL 1 (best) BASIC12.12□□□□□ -0.47
Cxcl1P12850 Scp2-201ENSMUST00000030340 2640 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Cxcl1P12850 Cxcr5-201ENSMUST00000062215 2614 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Cxcl1P12850 Adgrb2-206ENSMUST00000106018 4470 ntAPPRIS ALT2 TSL 5 BASIC12.12□□□□□ -0.47
Cxcl1P12850 Zfp318-204ENSMUST00000138127 3936 ntAPPRIS ALT2 TSL 5 BASIC12.12□□□□□ -0.47
Cxcl1P12850 Gm9918-201ENSMUST00000181801 2192 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Cxcl1P12850 Etv3-202ENSMUST00000119109 5309 ntAPPRIS P2 TSL 1 (best) BASIC12.12□□□□□ -0.47
Cxcl1P12850 Col2a1-202ENSMUST00000088355 4862 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Cxcl1P12850 Arhgef40-201ENSMUST00000093813 5621 ntAPPRIS P4 TSL 1 (best) BASIC12.12□□□□□ -0.47
Cxcl1P12850 Smo-201ENSMUST00000001812 3779 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Cxcl1P12850 Dcaf17-202ENSMUST00000102701 1703 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Cxcl1P12850 Brpf1-210ENSMUST00000204626 4381 ntAPPRIS ALT2 TSL 1 (best) BASIC12.12□□□□□ -0.47
Cxcl1P12850 Ski-202ENSMUST00000084103 5309 ntTSL 5 BASIC12.12□□□□□ -0.47
Cxcl1P12850 Ndufb11-201ENSMUST00000116621 908 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Cxcl1P12850 Saa1-201ENSMUST00000128088 609 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Cxcl1P12850 4930481B07Rik-201ENSMUST00000128160 1089 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Cxcl1P12850 Upp1-205ENSMUST00000164791 1252 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Cxcl1P12850 Gm4189-202ENSMUST00000174167 367 ntTSL 3 BASIC12.12□□□□□ -0.47
Cxcl1P12850 Syne4-208ENSMUST00000176304 1006 ntAPPRIS ALT2 TSL 5 BASIC12.12□□□□□ -0.47
Cxcl1P12850 Tbc1d7-202ENSMUST00000179852 1246 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Cxcl1P12850 Olfr683-202ENSMUST00000209879 3841 ntAPPRIS P1 TSL 5 BASIC12.12□□□□□ -0.47
Cxcl1P12850 Gm7787-201ENSMUST00000216858 688 ntBASIC12.12□□□□□ -0.47
Cxcl1P12850 Pfdn6-201ENSMUST00000025163 807 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Cxcl1P12850 Gnptg-201ENSMUST00000038973 1234 ntAPPRIS P2 TSL 1 (best) BASIC12.12□□□□□ -0.47
Cxcl1P12850 Apopt1-201ENSMUST00000040519 1065 ntAPPRIS P3 TSL 1 (best) BASIC12.12□□□□□ -0.47
Cxcl1P12850 Stx5a-202ENSMUST00000073430 2112 ntAPPRIS P2 TSL 1 (best) BASIC12.12□□□□□ -0.47
Cxcl1P12850 Sdhc-201ENSMUST00000081560 815 ntTSL 3 BASIC12.12□□□□□ -0.47
Cxcl1P12850 Ahnak-201ENSMUST00000092955 1046 ntAPPRIS ALT2 TSL 2 BASIC12.12□□□□□ -0.47
Cxcl1P12850 Ylpm1-207ENSMUST00000168977 4893 ntAPPRIS ALT2 TSL 5 BASIC12.12□□□□□ -0.47
Cxcl1P12850 Clcc1-201ENSMUST00000029483 2224 ntAPPRIS P3 TSL 5 BASIC12.12□□□□□ -0.47
Cxcl1P12850 Snupn-201ENSMUST00000068856 1391 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Cxcl1P12850 Otop2-201ENSMUST00000055490 2335 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Cxcl1P12850 Gm20708-201ENSMUST00000132298 1780 ntAPPRIS P1 TSL 2 BASIC12.12□□□□□ -0.47
Cxcl1P12850 Kdm6a-201ENSMUST00000044484 5918 ntAPPRIS P1 TSL 5 BASIC12.12□□□□□ -0.47
Cxcl1P12850 Kdm6a-202ENSMUST00000052368 5935 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Cxcl1P12850 Hsph1-211ENSMUST00000202361 3802 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Cxcl1P12850 Spryd3-203ENSMUST00000154032 2456 ntAPPRIS P1 TSL 5 BASIC12.12□□□□□ -0.47
Cxcl1P12850 Cdsn-201ENSMUST00000044804 2678 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Cxcl1P12850 Ubiad1-201ENSMUST00000051633 2992 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Cxcl1P12850 Ralgapb-201ENSMUST00000046274 8366 ntAPPRIS ALT1 TSL 5 BASIC12.12□□□□□ -0.47
Cxcl1P12850 Kif7-204ENSMUST00000184137 4093 ntAPPRIS P3 TSL 5 BASIC12.11□□□□□ -0.47
Cxcl1P12850 Mterf4-202ENSMUST00000112942 1525 ntTSL 2 BASIC12.11□□□□□ -0.47
Cxcl1P12850 Catsper4-204ENSMUST00000169381 1506 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Cxcl1P12850 Ssr1-204ENSMUST00000225319 1610 ntBASIC12.11□□□□□ -0.47
Cxcl1P12850 Idh3b-201ENSMUST00000028892 1616 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Cxcl1P12850 Dlk1-205ENSMUST00000109844 1703 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Cxcl1P12850 Zfp566-201ENSMUST00000088785 1709 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Cxcl1P12850 AC166491.1-201ENSMUST00000227053 2308 ntBASIC12.11□□□□□ -0.47
Cxcl1P12850 Hes2-201ENSMUST00000030782 2521 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Cxcl1P12850 Klc2-201ENSMUST00000025798 2940 ntTSL 5 BASIC12.11□□□□□ -0.47
Cxcl1P12850 Adra1b-204ENSMUST00000167574 3047 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Cxcl1P12850 Lmx1b-201ENSMUST00000041730 4790 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Cxcl1P12850 Cadps2-213ENSMUST00000166458 4598 ntAPPRIS ALT2 TSL 5 BASIC12.11□□□□□ -0.47
Cxcl1P12850 Ror2-201ENSMUST00000021918 3985 ntAPPRIS P2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Cxcl1P12850 Safb2-201ENSMUST00000075510 3277 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Cxcl1P12850 Rinl-206ENSMUST00000209035 2898 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Cxcl1P12850 Wwox-202ENSMUST00000109107 2383 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Cxcl1P12850 Lrrc14-210ENSMUST00000155735 2286 ntAPPRIS P1 TSL 5 BASIC12.11□□□□□ -0.47
Cxcl1P12850 Gm5105-201ENSMUST00000053318 1665 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Cxcl1P12850 Gm45188-201ENSMUST00000207592 1369 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Cxcl1P12850 Plxna1-202ENSMUST00000163139 9034 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Cxcl1P12850 Gm13836-201ENSMUST00000121159 501 ntBASIC12.11□□□□□ -0.47
Cxcl1P12850 1700023H06Rik-201ENSMUST00000161006 1044 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Cxcl1P12850 Rbm14-203ENSMUST00000180008 370 ntTSL 5 BASIC12.11□□□□□ -0.47
Cxcl1P12850 Eloc-203ENSMUST00000185771 742 ntAPPRIS P1 TSL 5 BASIC12.11□□□□□ -0.47
Cxcl1P12850 4930442P19Rik-201ENSMUST00000193163 1240 ntBASIC12.11□□□□□ -0.47
Cxcl1P12850 Gm32031-203ENSMUST00000208993 649 ntTSL 2 BASIC12.11□□□□□ -0.47
Cxcl1P12850 Inmt-201ENSMUST00000003569 1077 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Cxcl1P12850 Kcnq1-201ENSMUST00000009689 3029 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Cxcl1P12850 Mindy3-201ENSMUST00000028105 2344 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Cxcl1P12850 Cfap99-201ENSMUST00000207754 2123 ntAPPRIS P1 TSL 5 BASIC12.11□□□□□ -0.47
Cxcl1P12850 Hdac8-201ENSMUST00000087916 1936 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Cxcl1P12850 Hdac10-202ENSMUST00000109347 1824 ntTSL 5 BASIC12.11□□□□□ -0.47
Cxcl1P12850 Elovl1-201ENSMUST00000006557 1811 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Cxcl1P12850 Nek7-202ENSMUST00000186017 5258 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Cxcl1P12850 Igsf8-204ENSMUST00000139528 2866 ntTSL 2 BASIC12.11□□□□□ -0.47
Cxcl1P12850 Rnf122-205ENSMUST00000217278 1726 ntAPPRIS ALT1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Cxcl1P12850 Rasa4-202ENSMUST00000100570 2660 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Cxcl1P12850 Celf4-203ENSMUST00000223704 2492 ntAPPRIS ALT1 BASIC12.11□□□□□ -0.47
Cxcl1P12850 Gbe1-207ENSMUST00000171132 3303 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Cxcl1P12850 Gm37500-201ENSMUST00000192059 1443 ntBASIC12.11□□□□□ -0.47
Cxcl1P12850 Sohlh2-201ENSMUST00000029369 2364 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Cxcl1P12850 B4galnt1-201ENSMUST00000006914 2395 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Cxcl1P12850 Uba3-201ENSMUST00000089287 2257 ntAPPRIS P4 TSL 1 (best) BASIC12.11□□□□□ -0.47
Cxcl1P12850 Sugp2-214ENSMUST00000164403 4099 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Cxcl1P12850 Renbp-201ENSMUST00000114379 1318 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Cxcl1P12850 Synj1-203ENSMUST00000121759 7090 ntAPPRIS P4 TSL 5 BASIC12.1□□□□□ -0.47
Cxcl1P12850 Psap-202ENSMUST00000105465 2646 ntAPPRIS ALT2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Retrieved 100 of 76,532 protein–RNA pairs in 38.4 ms