Protein–RNA interactions for Protein: P10855

Ccl3, C-C motif chemokine 3, mousemouse

Predictions only

Length 92 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccl3P10855 Cilp2-201ENSMUST00000057831 4314 ntAPPRIS P1 TSL 5 BASIC12.88□□□□□ -0.35
Ccl3P10855 Sema6b-201ENSMUST00000001256 3736 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Ccl3P10855 Phtf1-202ENSMUST00000063717 3327 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Ccl3P10855 Safb-201ENSMUST00000095224 3106 ntAPPRIS P2 TSL 5 BASIC12.88□□□□□ -0.35
Ccl3P10855 Smim10l1-201ENSMUST00000100864 2842 ntAPPRIS P1 BASIC12.88□□□□□ -0.35
Ccl3P10855 CN725425-202ENSMUST00000190436 2041 ntAPPRIS P5 TSL 5 BASIC12.88□□□□□ -0.35
Ccl3P10855 Mindy1-212ENSMUST00000168223 1812 ntTSL 5 BASIC12.88□□□□□ -0.35
Ccl3P10855 Zfp865-201ENSMUST00000076251 7503 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Ccl3P10855 Usp43-201ENSMUST00000021288 4462 ntAPPRIS P3 TSL 1 (best) BASIC12.88□□□□□ -0.35
Ccl3P10855 Gm43352-201ENSMUST00000196419 3065 ntBASIC12.87□□□□□ -0.35
Ccl3P10855 Wdr41-201ENSMUST00000056512 3063 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Ccl3P10855 Tex261-201ENSMUST00000014892 2984 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Ccl3P10855 Abl1-201ENSMUST00000028190 5794 ntAPPRIS P3 TSL 1 (best) BASIC12.87□□□□□ -0.35
Ccl3P10855 Rgs14-201ENSMUST00000063771 2356 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Ccl3P10855 Plin5-201ENSMUST00000019808 1986 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Ccl3P10855 Gmpr2-201ENSMUST00000002397 1993 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Ccl3P10855 Trmt6-201ENSMUST00000039554 2828 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Ccl3P10855 Dvl2-207ENSMUST00000190940 5037 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Ccl3P10855 Pex5l-206ENSMUST00000108226 2632 ntAPPRIS ALT2 TSL 1 (best) BASIC12.87□□□□□ -0.35
Ccl3P10855 Fam83h-202ENSMUST00000170153 4534 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Ccl3P10855 Tmem59l-201ENSMUST00000045286 1491 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Ccl3P10855 Wdyhv1-201ENSMUST00000067563 1383 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Ccl3P10855 Gm12585-201ENSMUST00000117307 290 ntBASIC12.87□□□□□ -0.35
Ccl3P10855 Sec11a-202ENSMUST00000117383 1094 ntTSL 2 BASIC12.87□□□□□ -0.35
Ccl3P10855 Ccdc169-203ENSMUST00000118963 740 ntTSL 3 BASIC12.87□□□□□ -0.35
Ccl3P10855 Gm15393-201ENSMUST00000120499 219 ntBASIC12.87□□□□□ -0.35
Ccl3P10855 Mvk-203ENSMUST00000124260 1051 ntTSL 5 BASIC12.87□□□□□ -0.35
Ccl3P10855 Tmem109-207ENSMUST00000147699 1096 ntTSL 2 BASIC12.87□□□□□ -0.35
Ccl3P10855 Hoxd8-203ENSMUST00000151380 557 ntAPPRIS ALT2 TSL 2 BASIC12.87□□□□□ -0.35
Ccl3P10855 Atp5j2-202ENSMUST00000161741 955 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Ccl3P10855 Ucma-204ENSMUST00000167607 785 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Ccl3P10855 Cradd-202ENSMUST00000217809 1115 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Ccl3P10855 AC124510.1-201ENSMUST00000222659 583 ntTSL 5 BASIC12.87□□□□□ -0.35
Ccl3P10855 Tmem253-203ENSMUST00000227295 704 ntAPPRIS ALT2 BASIC12.87□□□□□ -0.35
Ccl3P10855 AC123645.1-201ENSMUST00000228469 605 ntBASIC12.87□□□□□ -0.35
Ccl3P10855 Ins1-201ENSMUST00000039652 1016 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Ccl3P10855 Rnf113a1-201ENSMUST00000046433 1223 ntAPPRIS P1 BASIC12.87□□□□□ -0.35
Ccl3P10855 B230219D22Rik-201ENSMUST00000057844 4652 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Ccl3P10855 Ccdc169-202ENSMUST00000061099 887 ntAPPRIS P1 TSL 5 BASIC12.87□□□□□ -0.35
Ccl3P10855 Smim11-201ENSMUST00000063641 517 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Ccl3P10855 Uhrf2-201ENSMUST00000025739 3536 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Ccl3P10855 Stum-201ENSMUST00000136521 6506 ntAPPRIS P2 TSL 1 (best) BASIC12.87□□□□□ -0.35
Ccl3P10855 Gps1-202ENSMUST00000116305 1827 ntAPPRIS P2 TSL 1 (best) BASIC12.87□□□□□ -0.35
Ccl3P10855 6430548M08Rik-204ENSMUST00000108951 5531 ntAPPRIS ALT2 TSL 1 (best) BASIC12.87□□□□□ -0.35
Ccl3P10855 Fbln1-202ENSMUST00000109432 2273 ntAPPRIS ALT2 TSL 1 (best) BASIC12.87□□□□□ -0.35
Ccl3P10855 I0C0044D17Rik-201ENSMUST00000097964 2264 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Ccl3P10855 Ralgapa1-202ENSMUST00000110687 7874 ntAPPRIS P2 TSL 1 (best) BASIC12.87□□□□□ -0.35
Ccl3P10855 Brap-201ENSMUST00000031414 3744 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Ccl3P10855 Cd1d1-202ENSMUST00000063869 1421 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Ccl3P10855 Tyw1-203ENSMUST00000100662 1867 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Ccl3P10855 Ush1c-207ENSMUST00000176371 1865 ntAPPRIS ALT2 TSL 5 BASIC12.87□□□□□ -0.35
Ccl3P10855 Fam222b-202ENSMUST00000100782 2473 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Ccl3P10855 Fam219a-201ENSMUST00000108049 3296 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Ccl3P10855 Cpxm1-201ENSMUST00000028897 2366 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Ccl3P10855 Klf7-201ENSMUST00000055001 1477 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Ccl3P10855 Clvs2-201ENSMUST00000019920 2717 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Ccl3P10855 Dnajc1-209ENSMUST00000166495 5497 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Ccl3P10855 Fbxl19-204ENSMUST00000188580 2601 ntAPPRIS ALT2 TSL 1 (best) BASIC12.86□□□□□ -0.35
Ccl3P10855 Papolb-201ENSMUST00000099400 4239 ntAPPRIS P1 BASIC12.86□□□□□ -0.35
Ccl3P10855 Wnk2-207ENSMUST00000159559 6584 ntAPPRIS ALT2 TSL 5 BASIC12.86□□□□□ -0.35
Ccl3P10855 Cachd1-202ENSMUST00000097955 4277 ntAPPRIS ALT2 TSL 1 (best) BASIC12.86□□□□□ -0.35
Ccl3P10855 Chchd4-201ENSMUST00000040835 3472 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Ccl3P10855 Gm15460-201ENSMUST00000118147 391 ntBASIC12.86□□□□□ -0.35
Ccl3P10855 Tpt1-ps6-201ENSMUST00000121768 523 ntBASIC12.86□□□□□ -0.35
Ccl3P10855 Mettl26-203ENSMUST00000163356 534 ntTSL 5 BASIC12.86□□□□□ -0.35
Ccl3P10855 1700022A21Rik-201ENSMUST00000182745 1051 ntBASIC12.86□□□□□ -0.35
Ccl3P10855 Lrcol1-202ENSMUST00000185691 764 ntAPPRIS P2 TSL 1 (best) BASIC12.86□□□□□ -0.35
Ccl3P10855 9230114J08Rik-201ENSMUST00000200375 350 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Ccl3P10855 Il13-201ENSMUST00000020650 1205 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Ccl3P10855 2310016G11Rik-202ENSMUST00000209111 733 ntTSL 3 BASIC12.86□□□□□ -0.35
Ccl3P10855 AC155286.1-201ENSMUST00000218632 448 ntBASIC12.86□□□□□ -0.35
Ccl3P10855 Gm19220-201ENSMUST00000222682 803 ntBASIC12.86□□□□□ -0.35
Ccl3P10855 AC121598.1-201ENSMUST00000228224 1019 ntBASIC12.86□□□□□ -0.35
Ccl3P10855 Dnah9-202ENSMUST00000108691 2671 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Ccl3P10855 Fam219b-202ENSMUST00000114200 3017 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Ccl3P10855 Disp2-202ENSMUST00000063975 1505 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Ccl3P10855 Fa2h-201ENSMUST00000038475 2492 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Ccl3P10855 Ctcf-201ENSMUST00000005841 3782 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Ccl3P10855 Adra2c-201ENSMUST00000049545 3445 ntAPPRIS P1 BASIC12.86□□□□□ -0.35
Ccl3P10855 Sirt5-207ENSMUST00000221515 1793 ntTSL 5 BASIC12.86□□□□□ -0.35
Ccl3P10855 Ubap1-202ENSMUST00000108060 2514 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Ccl3P10855 Ccdc43-205ENSMUST00000164506 2316 ntAPPRIS ALT1 TSL 5 BASIC12.85□□□□□ -0.35
Ccl3P10855 S100b-201ENSMUST00000036387 1484 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Ccl3P10855 Fgfr2-215ENSMUST00000122054 3323 ntAPPRIS P4 TSL 1 (best) BASIC12.85□□□□□ -0.35
Ccl3P10855 Ddc-202ENSMUST00000109659 1954 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Ccl3P10855 Klf15-204ENSMUST00000203607 2240 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Ccl3P10855 Ptprm-202ENSMUST00000223982 4802 ntAPPRIS P2 BASIC12.85□□□□□ -0.35
Ccl3P10855 Fggy-203ENSMUST00000107091 1395 ntTSL 5 BASIC12.85□□□□□ -0.35
Ccl3P10855 Esco1-203ENSMUST00000115864 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC12.85□□□□□ -0.35
Ccl3P10855 Jpt1-201ENSMUST00000021083 1375 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Ccl3P10855 Mau2-204ENSMUST00000212308 2887 ntAPPRIS ALT2 TSL 1 (best) BASIC12.85□□□□□ -0.35
Ccl3P10855 Adarb1-202ENSMUST00000098374 6584 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Ccl3P10855 Aen-201ENSMUST00000107421 2007 ntAPPRIS ALT2 TSL 1 (best) BASIC12.85□□□□□ -0.35
Ccl3P10855 Synj2-210ENSMUST00000115791 5051 ntAPPRIS ALT2 TSL 1 (best) BASIC12.85□□□□□ -0.35
Ccl3P10855 Slc22a18-201ENSMUST00000052348 1525 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Ccl3P10855 Boll-202ENSMUST00000114423 1106 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Ccl3P10855 Ldha-ps-201ENSMUST00000119390 995 ntBASIC12.85□□□□□ -0.35
Ccl3P10855 Gm11574-201ENSMUST00000139752 946 ntTSL 5 BASIC12.85□□□□□ -0.35
Ccl3P10855 Gm42846-201ENSMUST00000201771 514 ntTSL 3 BASIC12.85□□□□□ -0.35
Ccl3P10855 Abhd18-205ENSMUST00000203472 588 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Retrieved 100 of 76,532 protein–RNA pairs in 31.4 ms